Novosphingobium sp. PP1Y: PP1Y_AT34666
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Entry
PP1Y_AT34666 CDS
T01515
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00071
Fatty acid degradation
npp00362
Benzoate degradation
npp00650
Butanoate metabolism
npp01100
Metabolic pathways
npp01120
Microbial metabolism in diverse environments
npp01200
Carbon metabolism
npp01212
Fatty acid metabolism
Module
npp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PP1Y_AT34666
09103 Lipid metabolism
00071 Fatty acid degradation
PP1Y_AT34666
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PP1Y_AT34666
Enzymes [BR:
npp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PP1Y_AT34666
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GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
NAD_binding_2
DAO
ECH_2
GIDA
UDPG_MGDP_dh_N
F420_oxidored
ApbA
Pyr_redox_2
NAD_Gly3P_dh_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
CCA94192
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Position
complement(3634376..3636700)
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AA seq
774 aa
AA seq
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MNDTIRKVCVIGAGTMGAGIAAQVANAGVPVVLLDIVPKDGENRNAIAEGAVARMLKTEP
APFMSKAAAKLVETGNIEDHLDKVAECDWVIEAVIERLDIKQGLYAKLEAVKREGTAVSS
NTSTIPLAHLVEGRSDGFKRDFLITHFFNPPRYMRLLEIVTGPATDGAVADKVERFADVA
MGKTVVHAKDTPGFIANRIGTYWIQLGLNAAFDMGLTVEQADAIAGKPMGVPKTGIFGLV
DLVGIDLMPHLQASLTSTLPKDDPYQEIARSHPLIEKLISEGFTGRKGKGGFYRLNRDMG
RRKEALDLATGEYREKTSARGPSGRAAKGDLRALVETRGVVGEYAWAILGGTLAYAAALV
PSAAADVVAVDDAMKLGYNWKSGPFEMIDTLGAQYLAERLEAEGKPVPEILRLAGERTFY
RIEDGKRQFLGLDGEYHDVVRPEGVLRLADVKLASGPLLKNGSAALWDVGDGVACLEFTG
KMNALDGDVMKLIVEAIPLVSARFKALVVYNDADSFSAGANLGLALFAINIAAYGEVEKL
VAGGQMAYKGLKYAPFPVVGAPAGLAVGGGCEILLHCDAIQAHAELYTGLVECGVGLIPG
WGGNGEMIDRARKAPMMPKGPMPAVAKVFETVSTATVSKSAAQAKEMLFLRPHDGITMNR
DRLLHDAKQKALSLVEGYAPPEAPEFRLPGEGGHVALNMAAQGFHKRGMATDYDMVVSDA
LATVLTGGEADLVDTVSEQELLKLERETFMRLVREPRSIARVEHMLETGKPLRN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataccatccggaaagtctgcgtcatcggcgccggtaccatgggtgccggaatc
gccgcccaggtcgccaatgccggtgtgccggtcgtcctgctcgacatcgtccccaaggac
ggcgagaatcgcaacgccatcgccgaaggcgcggtggcgcgcatgctcaagaccgagcct
gcgcccttcatgtcgaaggctgcggccaagctggtcgagaccggcaacatcgaggaccat
ctcgacaaggtcgccgaatgcgactgggtgatcgaggcggtgatcgagcggctcgacatc
aagcagggcctctatgccaagctggaagcggtcaagcgcgagggtacggcggtctcgtcg
aacacgtcgaccatcccgcttgcccatctcgtcgaagggcgttcggacggcttcaagcgc
gatttcctgatcacccacttcttcaatccgccgcgctacatgcgcctgctggaaatcgtt
accggtcccgcgaccgatggggccgtggcggacaaggtggagcgcttcgccgatgtcgcg
atgggcaagacggtggtccatgccaaggacacgccgggcttcatcgccaatcgcatcggc
acgtactggatccagctcggcctcaatgccgctttcgacatggggctcaccgtcgagcag
gccgacgcgatcgccggcaagccgatgggcgtgcccaagaccggcattttcggtctggtc
gatctcgtgggcatcgacctgatgccgcacttgcaggcgagcctgacttccacgctgccc
aaggacgatccctatcaggagatcgcgcgcagccatccgcttatcgagaagttgatttcc
gagggattcaccggccgcaagggcaagggcggtttctaccgcctcaatagggacatgggt
cgccgcaaggaggctcttgaccttgcgaccggtgaataccgcgagaagaccagcgcccgc
ggcccttcgggtcgcgcagccaagggggacctgcgggcgctggtcgaaaccaggggcgtg
gtgggcgaatatgcctgggcgatcctgggcgggacgctggcttatgccgccgccttggtg
ccgtctgccgccgccgatgtcgtggccgtcgatgacgccatgaagctgggctacaactgg
aagtccgggccgttcgaaatgatcgacacgctgggcgcgcagtatcttgccgaaaggctc
gaggctgaaggcaagcccgttcccgagatcctcaggctggcaggagagcgcaccttctat
cgcatcgaggacggcaagcgccagttccttggccttgacggcgagtatcacgatgtcgtg
cgccccgaaggcgtgctgcgtctggcagacgtcaagctcgcctccgggccgctgctcaag
aacggctcggcagccctgtgggatgtcggcgacggagtggcctgcctcgaattcaccggc
aagatgaatgcgctcgacggcgacgtgatgaagctgatcgtcgaggcgatcccgctcgtt
tccgccaggttcaaggcgctcgtcgtctataacgacgccgacagcttctcggctggcgcc
aacctcgggcttgccctcttcgcgatcaatatcgccgcctatggtgaggtcgagaagctc
gtggccggcgggcagatggcctacaagggcctcaagtacgcgcccttcccggtggtggga
gcacctgccggtctggccgtgggcggcgggtgcgagatcctgctgcactgcgatgcgatc
caggcccatgccgaactctacaccggcctcgtcgaatgcggcgtcggcctgatccccggc
tggggtggcaatggcgagatgatcgaccgcgcgcgcaaggcgcccatgatgcccaagggg
ccgatgcccgccgtcgccaaggtgttcgagacggtctcgaccgcgactgtttccaagtct
gcggcgcaggcgaaggaaatgctgttcctgcgcccgcatgacggcatcaccatgaaccgc
gaccgcctgcttcacgatgccaagcagaaggcgctttcgctggtggaaggctacgcgccc
cccgaagcgcccgagttcaggttgccgggcgagggcgggcacgtcgcgctcaacatggcg
gcgcaaggcttccacaagcgcggaatggcgaccgattacgacatggtcgtttccgatgcc
ctggccaccgtgctgaccggaggagaggccgacctcgtcgatacggtgagcgagcaggaa
ctgctcaagcttgagcgcgagaccttcatgcggctggttcgcgaaccgcgctcgattgcg
cgggtcgaacatatgcttgaaaccggaaagccgctgcgcaactga
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