Novosphingobium sp. PP1Y: PP1Y_AT34846
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Entry
PP1Y_AT34846 CDS
T01515
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npp03032
]
PP1Y_AT34846
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT34846
Enzymes [BR:
npp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PP1Y_AT34846
DNA replication proteins [BR:
npp03032
]
Prokaryotic type
DNA Topoisomerases
PP1Y_AT34846
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP1Y_AT34846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
ACAD9-ACADV_C
Motif
Other DBs
NCBI-ProteinID:
CCA94205
UniProt:
F6IIY7
LinkDB
All DBs
Position
3654157..3656664
Genome browser
AA seq
835 aa
AA seq
DB search
MASEPENGKNTNSYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDLVLIELNPDGSVSVEDNGRGIPTDIHAEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEWLELTVWRDGKEHWMKFAHGDAVSPLEVRGPAPEGKKGT
RVTFLASTDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLRDRRHEEIVEHDLFYEGGIG
AFVQFLDRNKQALMPDPIAISADKDGIGMEVALEWNDSYYENVLCFTNNIPQRDGGTHLA
AFRAALTRTLNGYAERSGLLKKEKVSLSGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSS
EVRQPLEALMSEKMSEWLEENPATAKTIVQKVIDAAAAREAARRARELTRRKGAMDIASL
PGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRKTQAILPLKGKILNVERARFDRIIS
SKEVGTLIQAMGTGIRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEIIRA
GHLFIAQPPLYKVAKGRSEVYLKDNAALDRYLVEGGLNGRVLETAGGARSGPDLESLVEH
AIRMRNLMAFVPRRYDTNIIEALALAGVLAPDLTSDAREAAMTRAAAWLDRGDTEARWTV
SMSPEGNLEVERLWRGVTDHHKIEAAFLTSAEARKLARLAAENVDVYANAARLVRATAVA
ETAEPEEANDDDGETSAARPVVGEDAITRPSELLEKVLSTGRKGLSIQRYKGLGEMNAEQ
LWETTLDPENRALLQVKVEDADVTDEIFTRLMGDIVEPRREFIQENALNVANLDV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaacccgaaaacggcaagaacaccaactcctacggcgcagactcgatcaag
gtcctcaagggcctcgacgcggtgcgcaagcgccctggcatgtacatcggcgacaccgac
gacggctcgggtctccaccacatggttttcgaggtttccgacaacgcgatcgacgaggcc
ctggccgggcactgcgacctcgtcctcatcgagctgaaccccgatggctcggtctcggtc
gaggacaacggccgcggcattcccaccgacattcatgccgaggaaggcgtttcggcggcc
gaggtcatcatgacccagctccacgccggcggcaagttcgagaacacctcggacgacaat
gcctacaaggtttccggcggcctgcacggcgtcggcgtctcggtggtcaatgccctgtcc
gaatggctggagcttaccgtctggcgcgacggcaaggagcactggatgaagttcgcccat
ggcgacgccgtgtctccgctggaagtgcgcgggcccgcccccgaaggcaagaagggcacg
cgcgtaaccttccttgcttccaccgacacgttcaagaacgtgaccgaattcgacttcgag
aagctggagcaccgctaccgcgaactcgcgttcctcaattcgggcgtacgcatcaagctg
cgcgaccgccgccatgaggaaatcgtcgagcacgacctgttctacgaaggcggcatcggt
gcattcgtgcagttcctcgaccgcaacaagcaggcgttgatgcccgatcctatcgccatt
tcggcggacaaggacggcatcggcatggaagtcgcgctcgaatggaacgattcctattac
gagaacgtattgtgcttcaccaacaacatcccgcagcgtgacggcggcacccatctcgcc
gctttccgcgccgcgctgacccgcacgctcaacggctatgccgaacgctcggggcttctc
aagaaggaaaaggtctcgctttcgggcgacgacatgcgcgaaggcctgaccgcgatcgtt
tcggtgaagctgcccgatcccaagttctcctcgcagacgaaggacaagctggtcagctcc
gaagtgcgtcaaccgctcgaggcgctgatgagcgagaaaatgagcgagtggctggaggaa
aaccccgccactgccaagaccatcgtccagaaggtgatcgacgccgccgccgcccgcgaa
gcggcgcgccgtgcccgcgaactgacccgccgcaagggcgcgatggacatcgccagcctg
cccggcaagctggccgactgccaggaacgcgatccgtccaaatgcgaactgttcctggtc
gagggtgattccgcaggcggttcggccaagcagggccgcgaccgcaagacccaggcgatc
ctcccgctcaagggcaagatcctcaacgtcgagcgcgcgcgcttcgaccgcatcatttcc
tccaaggaagtgggcacgctgatccaggcgatgggcaccggcatccgcgacgacttcaac
ctcgaaaagctgcgctaccacaagatcgtcatcatgaccgacgccgacgtcgacggcgcg
catatccgcaccctgctgctgacgttcttccatcgccagatgcccgagatcatccgcgcc
gggcacctcttcatcgcccagccgccgctctacaaggtcgccaagggccgcagcgaagtc
tacctcaaggacaatgccgcgctcgaccgctacctcgtcgaaggcggactcaacggccgc
gtgctggaaacggcgggcggcgctcgcagtgggccggacctcgaatcgctggtcgaacat
gccatccgcatgcgcaacctgatggccttcgtgccgcgccgttatgacaccaacatcatc
gaggccctggcccttgccggcgtgctcgcgcccgacctgacgagcgacgcacgcgaggca
gccatgacgcgcgcggcggcctggctcgatcgcggcgacaccgaagctcgctggaccgtg
agcatgagccccgagggcaatctcgaggtggagcgcctgtggcgcggcgtcaccgatcac
cacaagatcgaggctgccttcctcaccagcgccgaggcccgcaagctggcccgtctcgcc
gccgagaacgtcgacgtctatgccaatgccgcccgcctcgtgcgcgctacggccgtggcc
gagacggccgagcccgaggaggcgaacgacgacgatggcgaaacgagcgcagcgcgtccg
gtggtcggcgaagatgccatcacccggccgagcgaactgctcgagaaggtgctcagcaca
ggccgcaaggggctctcgatccagcgctacaagggtcttggcgaaatgaatgccgagcag
ctgtgggagaccacgctcgatccggagaaccgcgccttgctgcaagtcaaggtcgaggac
gcggacgtgaccgacgagatcttcacccgcctgatgggcgacatcgtcgaaccgcgccgc
gaattcatccaggaaaacgcgctcaacgtcgccaacctcgacgtctga
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