Novosphingobium sp. PP1Y: PP1Y_AT35162
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Entry
PP1Y_AT35162 CDS
T01515
Name
(GenBank) holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PP1Y_AT35162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT35162
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PP1Y_AT35162
RecFOR pathway proteins
PP1Y_AT35162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
Motif
Other DBs
NCBI-ProteinID:
CCA94228
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All DBs
Position
complement(3689284..3689892)
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AA seq
202 aa
AA seq
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MIAKLTGLLDDTGSDWAIIDVNGVGYLVHCSARTLEHLGIRGDRVVVHTEMQVSETDQRL
IGFASAAERNWFRLLTAVQGVGSKVALAILSALNTEELQRACAGGDAAMVARANGVGPKL
ASRIVNELKEKAGGMPTAPGSPGVATSAAPAGSVSADAVSALQNLGFKPAIASTAVAHAM
GELGDDADLNAIVRVALKRAAG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccaagcttacaggtctgctcgacgataccggctcggactgggcgatcatcgac
gtcaacggggtgggatacctcgtccattgctccgcccgcacgctggagcacctgggtatt
cgcggcgacagggtcgtcgttcataccgaaatgcaggtctccgaaaccgaccagcgcctc
atcggctttgccagcgcggcggagcgcaactggttccgcctgctgacggccgtgcagggc
gtcggctccaaggtggcgcttgcgatcctctcggcgctcaacaccgaggaactgcagcgc
gcttgcgccggcggtgatgccgcgatggtcgctcgggccaatggcgtcgggccgaaactg
gcaagccgaatcgtcaacgagctgaaggaaaaggccggcggcatgccgaccgcgccgggc
tccccgggtgtggcgacgtcagcagcgcccgcaggttcggtcagcgccgatgcggtctcc
gcgctgcagaacctcggcttcaagcccgccatcgccagcaccgcagtggctcatgcgatg
ggcgaactgggcgatgacgccgacctcaacgccatcgttcgcgtggccctcaagagggct
gcggggtga
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