KEGG   Novosphingobium sp. PP1Y: PP1Y_AT35939
Entry
PP1Y_AT35939      CDS       T01515                                 
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npp03400]
    PP1Y_AT35939
Enzymes [BR:npp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PP1Y_AT35939
    5.6.2.6  RNA 3'-5' helicase
     PP1Y_AT35939
DNA repair and recombination proteins [BR:npp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PP1Y_AT35939
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: CCA94315
UniProt: F6IJR1
LinkDB
Position
complement(3774103..3776556)
AA seq 817 aa
MSKQAGVPPEIAQWFQARGWRARRHQADMLAAADEGRHALLVADTGAGKTLAGFLPTLAA
FCPSRLGGMKPAEGLHTLYVSPLKALAHDVQRNLVTPVEEIGLPIRIETRSGDTPSDRKA
RQRARPPHVLLTTPESLSLLLSYPEAPELFSTLQRVVIDEVHAFATGKRGDLLALSLARL
QALAPAMQRAALSATLADPDSYRGWLAPWGDIDTVALVAGEAGAEPDVSILLPRDERIPW
SGHAATWAIDQLYEKIRAHRTTLVFTNTRFLAEYIFQCLWDANEDKLPIGIHHGSLSKEA
RRKVEGAMARGELRALVCTASLDLGIDWGDIDLVVQMGAPKGSSRLLQRIGRANHRLDSP
SEAILVPGNRFEFFEAFAAQEAVREGRRDGEGFRPGGLDVLAQHVMAIACSGPFREEDVL
SEVRSTQAYAWVDEAIFARVLDFVATGGYALRSYDRFRRILKDRDGTWRLTHPEHAARHR
LNAGIIVDAEMLDVRFRNGRSLGKVEEGFGASLEPGDTFRFAGMDLEVESLKDLDLVVRA
AKRSATIPSYMGQRMPISTHLADRVREMLADRAGWARFPDDVREWLEVQDWRSHLPAPGR
LLVESFPHRGLAYTTYYTFEGWPANQSLGMLVTRRMEDRGLGPLGFVATDYALSIWGLKP
VEDPAVLLSPDILTDEFVDWVQQSYLLRRAFREVAVISGLVERQHPGKRKSGRQVTFSTD
LIYDVLCKYEPDHLLIEAAWADARSRMTDVARVADVLDRAAREIDHIRLDRISPLSVPVL
SMIGRESLPSGAADDELLHEAESLASLAMRVDPALDE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgagtaagcaagcgggagtcccgcccgagattgcgcaatggttccaagctcgcggctgg
cgcgcccggcgccatcaggccgacatgcttgcggctgcggacgaggggcgccatgcgctg
ctcgtggccgataccggggccggcaagaccctcgcagggtttctgccgacgctggcggcc
ttctgcccgtcgcggctgggcgggatgaagcctgcagagggtctccacacgctctacgtc
tctccgctcaaggcgctggcacacgacgtgcagcgcaacctcgtcaccccggtcgaggaa
atcggtctgccgatccggatcgagacccgcagcggcgatacgccttcggaccgcaaggcc
cgccagcgcgcccgcccgccgcatgtcctgctgacgacaccggaatcgctttcgctgctg
ttgagctaccccgaggcgccggagctgttctcgaccctgcagcgggtggtgatcgacgag
gtgcatgccttcgccacgggcaagcgcggcgatcttctggcgctctcgctcgcgcggctg
caggcactggcgcccgcgatgcagcgcgcggcgctttcggcgaccctggcggatccggat
tcctatcgcggctggctggcaccctggggcgacatcgatacggtcgcgcttgtcgcgggc
gaagccggggccgaacccgatgtttcgatcctgctcccgcgcgacgagcgcattccctgg
agcgggcatgcggcgacatgggcgatcgaccagctctacgaaaagatccgcgcccaccgc
acgacgctggtgttcaccaacacgcggttccttgccgagtacatcttccagtgcctctgg
gatgccaacgaggacaagctgcccatcggcatccatcacggttccctgtcgaaggaggca
cgtcgcaaggtcgaaggcgcgatggcgcggggcgagttgcgggcgctcgtctgcacggcc
agtctcgacctcggcatcgattggggcgatatcgaccttgtcgtccagatgggcgcgccc
aagggctcctctcggctgctgcagcgcatcggcagggccaaccaccgtctcgacagcccg
agcgaggccatactggtcccgggcaaccgcttcgagttcttcgaggcattcgccgcgcag
gaggcggtgcgtgaaggccggcgtgatggcgaggggttccgtccgggcgggttggacgtc
ctggcccagcacgtcatggccattgcctgttccggtccgtttcgggaggaagacgtcctg
tccgaagtacgctccacccaggcctatgcatgggtggacgaagcgatcttcgcccgggtg
ctcgatttcgtggcgaccgggggctacgcactgcgctcctacgaccgctttcgccggatc
ttgaaggaccgggacggcacctggcggttgacccatcccgagcacgcggcgcgccaccgg
ctcaacgccgggatcatcgtcgatgccgagatgctggatgtgcgcttccgcaacgggcgc
tcgctgggcaaggtggaggagggcttcggcgcgagcctggagccgggcgataccttccgc
tttgccgggatggatctcgaagtggaatcgctcaaggatctcgaccttgtcgtccgggcg
gcgaagcgttcggcgacgatccccagttacatgggccagcgcatgccgatttcgacccat
ctggcggatcgggtccgtgagatgctggcagaccgcgcgggctgggcgcgctttcccgat
gacgtgcgcgaatggctcgaagtgcaggactggcgttcgcacctgccggctccgggacgt
cttctggtcgagagcttcccccatcgcggattggcctacacgacgtactatactttcgaa
ggctggccggcgaaccagtcgctcgggatgctggtgacgcggcgcatggaggatcgcggc
ctcggccctctcgggtttgtcgcgacggactacgcgctgtcgatctggggcctcaagccg
gtggaagatccggcggtgctgctttcaccggacatccttacggacgaattcgtcgattgg
gttcagcagtcctacctgttgcgccgcgccttccgcgaagtcgcggtcatctccggcctc
gtcgagcggcaacatcctggcaagcgcaagtcggggcgacaggtgaccttctcgaccgat
cttatctacgacgtcctgtgcaagtacgagcccgaccacctgctgatcgaggctgcctgg
gccgatgcccgctcacgcatgaccgacgtggcgcgcgtggcggacgttctcgaccgggcg
gcgcgagagatcgatcatatccggctcgaccggatcagccccctgtcggttcccgtgctc
tcgatgatcgggcgcgagagcctgccctcgggcgcggcggatgacgaactcctgcatgaa
gcggagagcctggcctcgcttgccatgcgggtcgatccggcgctcgatgaatag

DBGET integrated database retrieval system