Novosphingobium sp. PP1Y: PP1Y_AT36857
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Entry
PP1Y_AT36857 CDS
T01515
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00061
Fatty acid biosynthesis
npp00071
Fatty acid degradation
npp01100
Metabolic pathways
npp01212
Fatty acid metabolism
npp02024
Quorum sensing
npp04146
Peroxisome
Module
npp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PP1Y_AT36857
00071 Fatty acid degradation
PP1Y_AT36857
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PP1Y_AT36857
09145 Cellular community - prokaryotes
02024 Quorum sensing
PP1Y_AT36857
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
npp01004
]
PP1Y_AT36857
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npp04147
]
PP1Y_AT36857
Enzymes [BR:
npp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PP1Y_AT36857
Lipid biosynthesis proteins [BR:
npp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PP1Y_AT36857
Exosome [BR:
npp04147
]
Exosomal proteins
Exosomal proteins of breast milk
PP1Y_AT36857
Exosomal proteins of breast cancer cells
PP1Y_AT36857
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CCA94381
LinkDB
All DBs
Position
complement(3864239..3866044)
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AA seq
601 aa
AA seq
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MDLADFDKSTNIVSLFLARADALGDAPMLWSKRGGEWVSLSWAQVARDVCLIAQSLRQMG
LKAGDRVVIVSENRPEWCIADLGVMAAGCVTVPTYTTNTVRDHIHILENSGARAAIVSTE
KLARQLLPAIVQTDLCRHVVGMERVPGMQGGVYETYDWDALLTGDPVAARAEAEARLVDV
NRQDLACIIYTSGTGGAPRGVRQHHGMLLTNIAGAAEIIRDDFGWDAGETFLSFLPLSHA
YEHTGGQFFPIGLGGQIYYAEGLDKLASNIEEVRPTIMVVVPRLFEVLRTRIMKQIEKQG
ALPARLMHLALAVAARKAAGQQRLTDYPLDLLLEHTLRPKIRARFGGRNKALVSGGAPLN
PEIGVFFDAMGLTLLQGYGQTEAGPVISCNRPAAGLAMDTVGPPLRGVEVRIAEDGEILT
RGELVMHGYWQNEAASANVLIEGWLHTGDIGHFDDAGRIRITDRKKDMIVNDKGDNISPQ
KVESMLTLQPEIAQAMVSGDRRPYVVALIVPDADWALEWSRLNDIPFDIRALQDLPVFRN
AIRGAIDRVNADLSVIEKVRQFVFADEPFSIENEMMTPSLKIRRHKVREAYGERIDALYR
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgccgatttcgacaagagtacgaacatcgtttctctgttcctggcgcgcgcg
gacgccctgggcgatgccccgatgctgtggagcaagcgcggcggcgaatgggtttcgcta
agctgggcgcaagtagcgcgcgatgtctgcctgatcgcgcaatcgctgcggcagatgggc
ctcaaggcgggagaccgggtggtcatcgtctcggaaaaccggcccgaatggtgcatcgcc
gaccttggcgtcatggccgccggctgcgttaccgtgccgacctacacgacaaataccgtg
cgcgatcacatccatatcctcgaaaattcgggtgccagggctgcgatcgtctcgaccgag
aagctggcgcgccagcttctgccggccatcgtccagaccgacctgtgccgccatgtcgtg
gggatggagcgggtcccggggatgcagggcggcgtttacgagacctacgattgggacgcg
ctcctcaccggcgatccggtggcggcgcgcgccgaagctgaggcgcggctggtggacgtc
aaccggcaggacctggcctgcatcatctacaccagcggcaccggcggagcgccgcgcggg
gtgcgccagcatcacggcatgttgctgaccaacatcgccggcgcggcggagatcatccgc
gacgatttcggctgggatgccggagagaccttcctgtccttcctcccgctcagccatgcc
tatgagcacaccggcgggcagttcttcccgatcggcctgggcggacagatctactacgcc
gagggcctcgacaagctggcgtccaatatcgaggaagtgcgcccgacgatcatggtcgtc
gtgccgcgcctcttcgaagtcctgcgcacgcgcatcatgaaacagatcgaaaagcagggt
gccctgcccgcgcggctgatgcatctggcgctggccgtggcggcgcgcaaggcggccggg
caacagcgcttgaccgactatccgctggacctgctgctcgaacataccctgcggcccaag
atccgcgcgcgcttcggcgggcgcaacaaggcgctggtttccggcggcgcgccgctcaat
cccgaaatcggcgtatttttcgatgcgatgggcctgaccctgctgcagggctatggccag
accgaggccggtccggtgatcagctgcaaccggcccgcggcggggctggcgatggacacc
gtgggcccacccttgcgcggggtcgaggtccggattgccgaggatggcgagatcctgacc
cgcggcgagctggtcatgcatggctactggcagaacgaggcggcctcggccaatgtcctg
atcgaaggctggctgcataccggcgacatcggccatttcgacgatgccgggcggatcagg
atcaccgaccgcaagaaggacatgatcgtcaacgacaagggcgacaatatctcgccccag
aaggtcgaatcgatgctgaccctgcagccggaaatcgcgcaggccatggtcagcggcgac
cggcggccctatgtcgtcgcgctcatcgtacccgatgcggactgggcgctggagtggagc
cgtctcaacgacattcccttcgacatcagggcccttcaggacctgccggtgttccgcaac
gcgatccgcggcgccatcgaccgggtcaatgccgatctctctgtcatcgagaaggtccgc
cagttcgtcttcgccgacgaaccattctcgatcgagaacgagatgatgacgcccagcctg
aagatccgtcgccacaaggtgcgcgaggcctacggcgagcggatcgacgctctctaccgc
aactga
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