Novosphingobium sp. PP1Y: PP1Y_AT37269
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Entry
PP1Y_AT37269 CDS
T01515
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03030
DNA replication
npp03430
Mismatch repair
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP1Y_AT37269
03430 Mismatch repair
PP1Y_AT37269
03440 Homologous recombination
PP1Y_AT37269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npp03032
]
PP1Y_AT37269
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT37269
Enzymes [BR:
npp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP1Y_AT37269
DNA replication proteins [BR:
npp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP1Y_AT37269
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP1Y_AT37269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCA94433
LinkDB
All DBs
Position
complement(3907829..3908512)
Genome browser
AA seq
227 aa
AA seq
DB search
MREIIFDTETTGFDPKNGDRMVEIGCIEMVNRVLTGRTFHAYFNPERSMPAEAEAVHGLS
DAFLADKPLFAERAHEFLDFIEDSPMVAHNAGFDFNFINFELQTCGHAEVSRDRMVDTVA
LAKVRHPGAKLSLDALCTRYGIDRSHRTKHGALLDAELLAQVYVELRGGRQIGLELGAEI
TEIVTETKILTRRDRPFRQPRSHAATEEELAAHAEFLKSVDTPLWGA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatcttcgataccgaaacgacggggttcgaccccaaaaacggtgaccgg
atggtcgaaatcggttgcatagaaatggtcaaccgagtgctcactggacgcaccttccac
gcctatttcaatcccgagcggtcgatgccggccgaagcggaggccgtccacggtctttcc
gatgctttcctggccgacaagccgctgtttgccgaaagggcgcacgagtttctcgacttc
atcgaagacagcccgatggtggcgcataacgccgggttcgacttcaacttcatcaatttc
gaattgcagacctgcggtcatgcggaagtcagccgcgatcggatggtagataccgtggcc
ctggccaaggttcgccatcccggcgcgaagctttcgctcgatgcgctgtgcacacgctat
ggcatcgaccgcagccaccgcacgaagcatggcgccctgcttgacgcggaactgctggca
caggtctatgtcgagctccgcggaggccgccagatcggcctcgagctgggagccgaaatc
accgagatcgtgacggaaacgaagatcctcacacgaagggatcgacctttccgtcagccg
cggtcccacgcggccaccgaagaggaactcgccgctcatgcggaattcctcaagtcggtc
gataccccgctctggggtgcctga
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