KEGG   Novosphingobium sp. PP1Y: PP1Y_AT4660
Entry
PP1Y_AT4660       CDS       T01515                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp00300  Lysine biosynthesis
npp00470  D-Amino acid metabolism
npp01100  Metabolic pathways
npp01110  Biosynthesis of secondary metabolites
npp01120  Microbial metabolism in diverse environments
npp01230  Biosynthesis of amino acids
Module
npp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:npp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PP1Y_AT4660
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PP1Y_AT4660
Enzymes [BR:npp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PP1Y_AT4660
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: CCA91423
UniProt: F6IHH2
LinkDB
Position
490768..492033
AA seq 421 aa
MDHFELKNGALHAEDVPLETIAREVGTPVYVYSRATLTRHARVFREALSALPSVHIAFAV
KSNPNLAVLHLLASEGYGADVVSEGEMRRALAAGIPARDIVFSGVGKSKRELKAAVEAGI
GQFNLESEEEGVELAQIAAALGKRASCALRVNPNVDARTHAKISTGKAENKFGVAYDVAA
GIYARLAGLPGLQMRGLAVHIGSQISDLEPSRQAFIKMGALMETIRAEGHEVTHMDLGGG
LGVPYKVGESLPTPDDYGRMVHDVAKDWGVTLMFEPGRVITGNSGVLVTEVIRVKQGASN
PFVVVDAAMNDLARPAMYDAWHDFAAVNPTGATMVANIVGPICESSDTFAMGREIDAVKA
GDFGVFRTAGAYGATMANTYNSRALVPEVMVDGEKWGLVANRIEPETILAAERVPDWLKQ
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaccatttcgaactgaagaacggcgcgcttcacgccgaggacgtgccgctcgaaacg
atcgcgcgcgaagtcggcacgccggtctacgtctattcgcgcgccacgctgacgcgccat
gcccgcgtctttcgcgaggcgctttcggccctgcccagcgtgcacatcgcctttgccgtc
aaatccaaccccaacctggccgtactgcatctgctggccagcgaaggctacggtgccgac
gtagtgtcggaaggcgagatgcgccgggccctggccgcgggcatcccggcccgtgacatc
gtcttttccggcgtcggcaagtcgaagcgtgagctcaaggcagcggtcgaggcgggcatc
gggcagttcaacctcgagagcgaggaagaaggcgtcgagctggcgcaaatcgccgcggcg
ctgggcaagcgggcctcctgcgcgctgcgcgtgaatcccaatgtcgatgccaggacccac
gccaagatctcgaccggcaaggccgagaacaagttcggcgtcgcctatgacgtggccgcc
ggcatctacgcccgcctcgccggattgcccggcctgcagatgcgcggccttgccgtgcac
atcggcagccagatcagcgacctcgaaccctcgcgccaggccttcatcaagatgggcgcg
ctgatggagacgatccgggccgaaggccacgaagtcacgcacatggacctcggcggcggc
ctgggcgtgccctacaaggtgggcgaaagcctgcccacgcccgatgactacgggcgcatg
gtccacgatgtggcgaaggactggggcgtcaccctgatgttcgaaccgggccgcgtcatc
accggcaattccggtgtgctcgtgaccgaggtgatccgggtgaagcagggcgcgtcgaac
cccttcgtggtggtcgatgcggcgatgaacgacctcgcccgtccggcgatgtacgatgcc
tggcacgatttcgcggcggtcaacccgaccggcgcgacgatggttgcgaacatcgttggc
ccgatctgcgaaagctccgacactttcgccatggggcgcgagatcgatgcagtgaaggca
ggcgatttcggcgtgttccgcactgccggtgcctacggcgcgacgatggccaatacctac
aacagccgtgcgctggtgcccgaggtgatggtcgacggcgagaagtggggccttgtcgcc
aaccgcatcgagcctgagaccatcctggccgccgaacgcgtgccggattggctgaagcag
gcgtaa

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