Novosphingobium sp. PP1Y: PP1Y_AT6670
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Entry
PP1Y_AT6670 CDS
T01515
Name
(GenBank) putative TonB-dependent receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT6670
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT6670
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CCA91615
LinkDB
All DBs
Position
709745..711904
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AA seq
719 aa
AA seq
DB search
MKNDFEVTRTSVSAALRQRGSLTVLAAALCAIASPAAAQDSKEIVVTAQRVNATHVENGG
SAGVLGNKAAEDLPFNVRSFDETLILNQQPKSLGEVLENDPTVRTTYGFGNAAESFVIRG
FELFGDDVGLNGLYGITPRQLIAPELFESVQVLNGSSAFLNGAAPGGSGLGGSVNLLLKR
AGDAPLNRVTAGYTSDSHFGGSFDVSRRFGDFGVRVNGNYQDGQLGIDREDRMSGVLGAG
FDWSNGPVRVSLDLGYQKVRVDDLRPKVTIYTATIPRVPKASANYSQKYTYSKLRDIFGV
FNFEYDFAENATLWAKAGARDGSEDGIYGGFNLFDATTGDGSGNALYVPRTDNNEAAEVG
ARVKLGSAVTHEIVVGGNASWQVNRNAFDFLYGDGFAGFPTNLYDTPQLDPLTSSLVGGD
LNDPYPISRTRLWSAFASDTVGFLDDRILVTGGLRLQTLNIKTYGYYDGGLPESAYDADE
VTPVVGVVVKPVEGLSLYANRIEALQQGPSAGFGAANFGEVFPPYVSTQYEFGGKGKIGP
MFVSLAFYQIKKPNGYIDNNTLVFAVNGEQRNRGMELTLNGELAPGLRLISGLAVNDAKL
TKTGDATEGNDAKGVPDWTANANIEWDTPMIEGLTLTGRVIYTGKQWVDAANTLRLPDWA
VFNLGARYVLAAGDVPVTLRFNVDNVANKRYWASAYDAFSSALLQGQPRTFKASISADF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgattttgaggtcactcgcaccagtgtttccgcggcgctccggcagcgcggc
agcctgaccgtcctcgccgccgcgctttgcgccatcgccagcccggccgccgcgcaggac
tccaaggaaatcgtcgtcaccgcacagcgggtcaacgccacccacgtcgagaacggcggt
tcggcgggcgtgctgggcaacaaggccgccgaagacctgcctttcaacgtgcgcagcttc
gatgaaacgctgatcctcaaccagcagccaaagtcgctcggcgaagtgctcgagaacgat
ccgaccgtgcgcacgacctacgggttcggcaatgcggcggaaagcttcgtcatccgcggc
ttcgagctgttcggcgacgacgtcggcctcaacggtctctacggtatcaccccgcgccag
ctgattgcgccggaacttttcgaaagcgtccaggtgctcaatggctcgtcggccttcctc
aatggcgcagcgccgggcggttcgggccttggcggtagcgtcaacctgctgctcaagcgc
gccggtgacgcgccgctcaaccgcgtgactgcaggctatacctcggattcgcacttcggc
ggcagcttcgacgtctcgcgccgcttcggcgacttcggcgtgcgcgtgaacggcaactac
caggacggccagctcggcatcgaccgcgaggatcgcatgtcgggcgttctgggcgccggc
ttcgactggtccaatggcccggttcgcgtctcgctcgacctcggttaccagaaggtgcgc
gtcgacgatctgcgccccaaggtgacgatctataccgcgaccatcccgcgggtgcccaag
gccagcgccaactattcgcagaagtacacctacagcaagctgcgcgatatcttcggcgtc
ttcaacttcgagtacgactttgctgaaaatgcgacgctctgggccaaggccggcgcgcgc
gacggcagcgaggacggtatctatggcggcttcaacctgttcgatgcgaccactggcgac
ggttcgggcaatgccctttacgtgccgcgcaccgacaataacgaagcggccgaggtcggc
gcgcgcgtcaagctgggcagcgccgtcacgcatgagatcgtcgtgggcggcaatgccagc
tggcaggtcaaccgcaatgccttcgacttcctctatggcgacggttttgccggcttcccg
accaatctctacgataccccgcagctcgatccgctgacttcctcgcttgtcggcggcgat
ctcaacgatccctacccgatctcgcgcacgcggctctggtcggcctttgcctccgacacc
gtcggtttcctcgacgatcgcatcctcgtgaccggcggcctgcgcctgcagacgctcaac
atcaagacctatggctattacgatggcggcctgccggaatcggcttacgatgccgacgag
gtgacgccggtcgtcggcgtggtcgtgaaaccggtagaggggctgtcgctctacgccaac
cggatcgaggcgctgcaacaggggccctccgccggcttcggcgccgccaacttcggcgaa
gtcttcccgccctacgtctcgacccagtacgagttcggcggcaagggcaagatcggcccg
atgttcgtgagcctggcgttctaccagatcaagaagcccaacgggtacatcgacaacaat
acgctggttttcgcggtcaacggcgagcagcgcaaccgcggcatggagcttacgctcaac
ggcgaactggcccccggcctgcgcctgatctcgggtcttgcggtcaatgacgccaagctg
accaagaccggcgatgccaccgagggcaacgatgccaagggcgtgccggattggaccgcg
aacgcgaacatcgagtgggataccccgatgatcgagggcctgaccctgaccgggcgcgtg
atctataccggcaagcagtgggtcgatgcggccaatacgctgcgcctgccggactgggcc
gtgttcaacctcggcgcgcgctatgtcctcgctgcgggagacgtgcccgtcacgctgcga
ttcaacgtcgataacgttgccaacaagcggtactgggcctcggcctacgacgccttctcc
tcggccctgctgcaaggccagccgcggaccttcaaggcttccatctcggcagacttctga
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