KEGG   Novosphingobium sp. PP1Y: PP1Y_AT7136
Entry
PP1Y_AT7136       CDS       T01515                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:npp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP1Y_AT7136
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_AT7136
Enzymes [BR:npp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PP1Y_AT7136
Secretion system [BR:npp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PP1Y_AT7136
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_16 TrwB_AAD_bind ABC_tran nSTAND_NTPase5 CbiA
Other DBs
NCBI-ProteinID: CCA91656
LinkDB
Position
764021..766453
AA seq 810 aa
MAPKTKSRRAIPGLKGWAGKEALVGDRLPYQALVDENVVLLRDGSVMLSLMVPGLAFETA
DTDELNAHVATREVLLRSSLDARFVLYHHVIRRRVEIELEGHFDDPLAAHIDSRWRARTG
SGALFVNDQFITLVRRPARGKAGWADKLSRMMKRKGGEAVEADPADVRSLRAAASAMVAS
LGSYGARMLGDYDTAKGQCSEVLELLSALYNGEMRPVRRPAEGTDIGHMLPYRRINFGMD
ALELRGASNASFASVVSLKDYPDSTAPGLTDALLRLPCELVLTETYAPCDRQIARERIDL
AIRRLRSADEEAMAERREMASARDSLGTGAVGFGDHHLSVLVRADSLEGLDEVTAMCAAS
LADAGAVAVREEVNLEPAFWGQLPGNEGFIVRRALISSANMACFGSLHGFAMGQASGNHW
GDAVTLLSTTSSTPFFFNFHQGDLGNFTVIGPSGSGKTVVMNFLAAQAQKFAPRTILFDK
DRGAEVFLRGIGGTYSRVAAGHPTGFNPLSLPDTATNRAFLRDWLGVLLSANGPEELATI
AGAVDAAYANDPSLRRLSYFRELLAGSRRPQPGDLASRLDAWIGGGEHGWLFDNQYDRLD
LSARVLGFDMTALLESPRLRTPVMMYLFHRIEERLDGEPTMILIDEGWKALDDEVFAARI
RDWLKTLRKRNALVGFATQSARDALDSKIATALVEQTATMIFMPNARARAEDYCEGFGLT
QHELDVIRTLPAHSRCFLIRQSDASVVVRLDLAGMPEVLTVLSGRESTVRKLDTLRERYG
DDPAAWYPVLTGMTWPGDAEDGAAWIQAAE
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggcgccaaagacgaagtcgcgacgcgcgatcccgggcctgaagggctgggccggcaag
gaagcccttgtcggcgaccggctgccctaccaggcgctggtggacgagaacgtcgtgctg
ctgcgcgacggttcggtgatgctgtcgctgatggtcccgggcctcgcgttcgaaactgcc
gataccgacgagctgaacgcccacgtcgccacccgtgaagtgctgctgcgttcctcgctc
gatgcgcgtttcgtgctgtaccaccacgtgatccgccgccgggtcgagatcgagctggaa
ggtcacttcgacgatccgcttgcggcgcacatcgattcgcgctggcgggcccgcaccggt
tcgggcgcgctgttcgtgaacgaccagttcattacccttgtccgccgccccgcgcgcggc
aaggcgggctgggccgacaagctgtcccgcatgatgaagcgcaagggcggcgaggcggtc
gaggccgatcccgctgacgtgcgctcgctgcgtgccgccgccagtgcgatggtcgcctcg
ctcggctcctacggcgcgcgcatgctgggcgactacgacaccgccaagggccagtgctcc
gaggtcctcgaactgctttcggcgctctacaacggcgagatgcggcccgtacgccgccct
gccgagggcacggatatcggccatatgctgccctatcgccggatcaacttcggcatggac
gcgctggaactgcgcggggcttcgaatgcctcgttcgcctcggtcgtcagcctcaaggac
tatcccgattcgaccgctccgggactgactgacgccttgctgcgcctgccctgcgagctg
gtcctgaccgagacatatgcgccttgcgaccgccagatcgcgcgtgaacgcatcgatctt
gcgatccgccgcctgcgttcggcggacgaagaagcgatggccgagcgccgcgaaatggcg
agcgcccgcgattcgctcggcaccggtgcggtcggtttcggcgatcatcacctctcggtg
ttggtgcgtgccgattcgctggaagggctcgacgaagtgaccgcgatgtgtgcggcctcg
ttggccgatgccggtgccgtcgccgtacgcgaggaagtcaatctggagcccgccttctgg
ggccagcttcccggaaacgagggcttcatcgtccgccgcgcgctgatttccagcgccaac
atggcctgtttcggcagcctgcacggctttgcgatgggccaggcgagcggcaatcactgg
ggcgatgcagtgacgctgctgtcgaccaccagctcgacgccgttcttcttcaacttccac
cagggcgacctcggtaacttcactgtcatcggtccgtcgggttccggcaagacggtagtc
atgaacttcctcgccgcccaggcgcagaagttcgcgccgcgcacgatcctgttcgacaag
gaccgcggcgccgaagtcttcctgcgcggcatcggcggcacttacagccgcgtcgccgcc
gggcatccgaccgggttcaacccgctctcgctgcccgacaccgccaccaaccgcgctttc
ctgcgcgattggctcggcgtcctgctttcggccaacggccccgaggaactggcgacgatc
gccggcgcggtcgatgccgcctatgccaacgatccgagcctgcgccgcctctcgtatttc
cgcgagttgctggccggttcgcgccgtccgcagccgggggacctcgcgtcgcggctcgat
gcctggatcggcgggggcgagcatggctggctgttcgataaccagtacgaccggctcgac
ctttcggcccgcgtgctgggcttcgacatgactgcgctgctggaaagcccgcgcctgcgc
acgccggtgatgatgtacctgttccaccggatcgaagaacgcctcgacggcgaaccgacg
atgatcctgatcgacgagggctggaaggcgctcgacgacgaggtcttcgccgcgcgcatc
cgtgactggctcaagaccctgcgcaagcgcaacgcgctggtcggttttgcgacccagtcc
gcgcgcgatgcgctcgacagcaagattgccacggcgctggtcgagcagaccgcgacgatg
atattcatgcccaatgcgcgcgcgcgcgccgaggactactgcgaaggcttcggcctgacc
cagcacgaactcgacgtgatccgcacgctgcccgcgcattcgcgctgcttcctgatccgc
cagtccgatgcctcggtcgtggtccggctcgaccttgcgggaatgcccgaggttctgacc
gtcctgtcaggtcgcgagagcacggtgcgcaagctcgacaccttgcgtgagcgctatggc
gacgatccggccgcatggtacccggtactgaccgggatgacctggccgggcgacgccgag
gatggagccgcctggatccaggcggccgagtga

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