Novosphingobium sp. PP1Y: PP1Y_AT7409
Help
Entry
PP1Y_AT7409 CDS
T01515
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00300
Lysine biosynthesis
npp00550
Peptidoglycan biosynthesis
npp01100
Metabolic pathways
npp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP1Y_AT7409
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PP1Y_AT7409
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PP1Y_AT7409
Enzymes [BR:
npp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PP1Y_AT7409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
BT_MCC_alpha
Motif
Other DBs
NCBI-ProteinID:
CCA91681
UniProt:
F6IJ55
LinkDB
All DBs
Position
794099..795595
Genome browser
AA seq
498 aa
AA seq
DB search
MNAVARILDWPAELSDENPSALWDAVAIARAVKGTANAEFTVSGVEIDSRDVQPGDLFFA
LKGESMDGHRFVEMAFAKGAAAVVVDRPVDGPHILVKDTTEALEKLGAAARQRARGPIIG
VTGSVGKTGVKESIFAALDRSSRGDAHRSVKSYNNHVGVPLSLARMPSRARFGIFEMGMN
HAGEIAALTRQVRPHVAVITTIAPAHIEMLGSEEAIADAKAEIFQGLEEGGTAVIPADSP
HFLRLRDAAVACGAKVVSFGKAADADVRLLDTVSAIGGGSLVTVDMGDRRVCYTVAAPGE
HWVMNSLAVMAAVRAVKGDLGAAGVALAEMGGLPGRGARVEIDVPGGEADDEGQRKALLI
DESYNANPASMRATLAQLGRTPARRRIAVLGAMKELGSHGPDYHAALAEPIREAGVDYAV
LVGEEMAPLAKVLDEGELGKSEGAKLGKTVAFAHCGSVGEAVDALRAFGLERDDAILVKG
SNSVGLASLVTALSKQEG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgttgcccggattctcgactggcctgctgaactgtcggatgagaacccgtct
gcgctgtgggacgcggttgcgatcgcgcgcgcggtcaagggcacggcgaatgccgaattc
accgtttccggtgtcgagatcgacagccgcgacgtccagcccggagacctgttcttcgcc
ttgaagggggagagcatggacgggcaccgtttcgtcgagatggcctttgccaagggcgct
gcagccgtcgtcgtcgaccgtcccgtggacggccctcacatcctcgtgaaggacacgacc
gaagcgctggagaagctgggtgcagccgcacgccagcgcgcgcgcggtccgatcatcggc
gtgaccggatcggtcggcaagaccggcgtcaaggaatcgattttcgcggctctcgatcgc
tccagccgcggcgacgcgcatcgctcggtcaagagctacaataaccacgtcggcgttccg
ctcagccttgcgcgcatgcctagccgcgcgcgcttcggcatcttcgagatgggcatgaac
cacgccggcgagatcgccgcgctgacccggcaggtgcgcccgcacgttgcggtgatcacc
accattgccccggcccacatcgagatgctgggctccgaagaagcgattgccgatgccaag
gccgagatcttccagggactggaggaaggcggcacggcggtgatcccggcggacagcccg
catttcctgcgcctgcgcgatgcggcggtggcatgtggggcgaaagtggtgtcgttcggc
aaggccgccgatgccgacgttcgccttcttgataccgtttcggccatcggcggcggttcg
ctggtaacggtggacatgggcgaccgccgcgtctgctacaccgtcgctgccccgggcgaa
cactgggtaatgaattcgcttgccgtcatggcggcagtacgcgcggtcaagggagacctt
ggcgcagctggcgtggcgctcgccgaaatgggcggccttccgggccgcggtgcgcgcgtc
gagatcgacgttccgggcggcgaggccgacgacgaaggccaacgcaaggcgctgctgatc
gacgagagctacaacgccaatccggcctcgatgcgcgcgacgctggcccagctcggccgc
actccggcgcgtcgccggatcgccgtgctcggtgcgatgaaggagctgggcagccacggg
cctgactatcatgccgccctggccgaaccgatccgcgaggcgggcgtcgactacgccgtg
ctcgtcggagaggaaatggcgccgctcgccaaggtcctcgacgaaggggaattggggaaa
tcggaaggcgcgaaacttggcaaaaccgtggctttcgcgcattgcggcagtgtaggggaa
gctgtcgatgccttgcgcgcattcggacttgagcgggatgatgcaatccttgtcaaaggt
tcgaattcggtgggcctcgcttccctcgtgaccgcgctcagcaagcaggaagggtag
DBGET
integrated database retrieval system
