Novosphingobium sp. PP1Y: PP1Y_AT9134
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Entry
PP1Y_AT9134 CDS
T01515
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npp03009
]
PP1Y_AT9134
Enzymes [BR:
npp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
PP1Y_AT9134
Ribosome biogenesis [BR:
npp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PP1Y_AT9134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
CCA91853
UniProt:
F6IK35
LinkDB
All DBs
Position
980015..980563
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AA seq
182 aa
AA seq
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MARLILFNKPFDVLSQFTDLRSPTPRATLSDFIDLPGVYPAGRLDRDSEGLLLLTDDGRL
QARIADPKFKLAKTYLVQVEGEPDEASLERLRRGVALKDGMTRPAQVEPIDAPDLWPRNP
PVRFRKTVPDRWLRLTIREGRNRQVRRMTAAVGHPTLRLVRWQVGDWTLDGLATGQWREV
TV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgcctgatcctcttcaacaagccgttcgatgtcctttcgcagttcaccgacctg
cgttcgcccacgccgcgcgcgactttgtccgatttcatcgatctgcccggcgtctatccc
gcaggccggctggaccgcgacagcgaagggctgctgctgttgaccgacgacggccgcctg
caggcgcgtatcgccgacccgaagttcaagctggccaagacctacctcgtgcaggtcgag
ggagagcctgacgaggcgagcctcgaacgcctgcgccggggcgtggcgctcaaggacggg
atgacccggccggcgcaagtcgagccgatcgatgcgcccgacctgtggccgcgcaatccg
ccggttcggttccgcaagacggtgccggatcgctggctgcgcctgacgattcgcgaaggg
cgcaatcgccaggtgcggcgaatgacggcggccgtaggccatccgaccttgcgccttgtg
cgctggcaggtcggcgactggacgctcgatggcctcgctacgggccagtggcgtgaagta
actgtctga
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