Novosphingobium sp. PP1Y: PP1Y_Lpl1338
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Entry
PP1Y_Lpl1338 CDS
T01515
Name
(GenBank) putative integrase
Organism
npp
Novosphingobium sp. PP1Y
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_3
HTH_7
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CCA89933
UniProt:
F6ICA8
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Position
Lpl:122495..124021
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AA seq
508 aa
AA seq
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MALLSVIRRWHFRQNIPIREIERRTGLSRNTIRKYLRADTVEPKFKVPERPSKLDPFAEK
LSAWLRIEAGKSRKQRRTAKQMHADLVALGYEGSYNRVAAFARAWKADRQRDAQTSGRGT
FVPLIFRPGEAFQFDWSEDWAMIGGKQTKLQAAHTKLSHSRAFVVRAYPLQTHEMLFDAM
TQAFRVLGGVPQRGIFDNMKTAVDKIGTGKARQVNARFAAMASHYLFEPEFCNPAAGWEK
GQVEKNVQDARRRLWQAMPAFPDIDALNAWLEEQCIAQWGEIPHGVLPGTIADVHAAEIA
SLMPLGRPFDGFVEHTKRVSPTCLISFERNRYSVPASFANRPVSLRVYPERIVIAAEGQI
LCEHGRIIERSHDQPGRTIYDWRHYLAVIQRKPGALRNGAPFTEMPEAFRQLQSQLLKRP
GGDREMVEILSLVLHHDEQAVLCAVELALEAGVVTKTHILNILHRLVDGKDGTPPRIDAP
QALILRREPKANVARYDTLRDKDLRHAS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactgagtgtaatccgacgctggcatttccggcaaaacatcccgatccgggag
attgagcggcgcacgggcttgtcgcgcaacacgatccgcaagtacctgcgcgcggatact
gtggagccgaagttcaaggtcccagagcggccgagcaagctggacccgtttgccgagaag
ctgtcggcctggctgcggatcgaagctggcaagtcacgcaagcagcggcgcacagctaag
cagatgcacgccgatctcgtggctttgggatacgagggttcctacaaccgcgtggcagcc
ttcgcgcgggcctggaaggccgaccggcagcgcgatgcccagaccagtggtcgcgggact
ttcgtgccgctgatcttccgacccggcgaagccttccagtttgactggagcgaggactgg
gccatgatcggcggcaagcagaccaagctgcaggccgcacacacgaagctgtcgcacagc
agggctttcgtcgtcagggcctatccactgcagacccacgagatgctgttcgatgccatg
acccaggccttccgggttctgggcggcgtgccgcaacgaggaatcttcgacaatatgaag
accgcggtcgacaagatcggcaccggcaaagcgcggcaggtcaacgcccgttttgccgcc
atggcgagccactatctgttcgagccggagttctgcaacccggccgcaggatgggagaag
ggtcaggtcgagaagaacgtccaggatgcacggcggcgattgtggcaggcaatgccagcc
ttcccggacatcgatgcgctcaatgcctggctcgaggagcaatgcatcgcgcagtgggga
gagattccgcatggcgtgctgcccggcaccatcgccgacgtgcatgccgcggagatcgcg
agcctgatgccgctggggcggcccttcgacggcttcgttgaacacaccaagcgagtatcg
ccgacatgcctgatctccttcgagcgcaaccgctacagcgtccccgcgtccttcgccaac
cggccggtaagtctgcgggtctatcccgagcggatcgtcattgccgccgagggacagatc
ctgtgcgagcatgggcggatcatcgaacgatcccatgatcagccgggacggacgatctat
gactggcggcactatctcgcggtgatccagcgcaaaccgggagccctgcgcaatggcgcg
cccttcaccgagatgccggaggcgttccggcagctgcagagccaacttctgaagcgcccc
ggcggcgatagggagatggtggagatcctctcgttggtcctgcaccatgacgaacaggcc
gtgctgtgtgccgtcgaactggctctcgaggccggcgtcgtgaccaagacccatatcctc
aatatcctgcaccgcctggtcgacggcaaggacggcactccgcccaggatcgatgccccg
caggccctgatcctccgccgcgaacccaaggccaacgtcgcacgttatgataccctgcgg
gacaaggatctgcgccatgcgtcatga
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