Novosphingobium sp. PP1Y: PP1Y_Lpl321
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Entry
PP1Y_Lpl321 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_Lpl321
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_Lpl321
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
CCA89842
LinkDB
All DBs
Position
Lpl:27525..30110
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AA seq
861 aa
AA seq
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MIAALLAGSMVSASPVPAWAQTKGQAAPVYEFNLPAQDLGDALQAVARRARLELYATSSD
VNGVRAPGLNGKMSVREALDILLGGTGLEAEISEGAVLIMRPGQRRGAEADEVSDKQIIV
TGTHIRGAIPVAPVRTASREDIEEQGHSDLGDFIRSIPENYTGGQNPTVAGGGSQGVDNE
NSSSSSALNLRGLGPAATLTLLNGHRMAYDTVSQGVDISQIPLAAIDRIEIVTDGSSALY
GSDAVGGVANVILRRDYEGAYVSARLGGSSDGGNFQQQYDALTGSRWESGGIMVAGSFSD
VTEISARDRSYTRSLDDSTTLVPWRRQYSLIAAGHQDLTDRLGLEFDAQYNNRVTQLSQP
FTTTADVTTNGLQSRPKVQSATVSAGLHWDLGHSWTVSATGVYGFSNNHITSHRYIGGAE
TLRTWLNYDNDVATGEVTAEGALLDLPGGEVRLALGAGYRHMGLDVFVRQETGGTSNITK
DIRSGREVWFGYGELSLPLVGKANRMPLIERLQLSLAARYEDYPGTAHLLTPKAGVVYEP
IEGLTLRGAWGKSFKTQTLYQQYQYRQGSLNPAAYFPGSPTNLPVLLVAGGNINLKPEKA
TTWNLGFKLAPKALDGFELEATWFDIRYRDRVVSPVSSVLAIYTNPVYADYVTLNPSTAQ
VLAAIADLPQGLNNQTGEPFDPSAVGALVDASFQNAARQHLRGFDLAARYRIELGEDETV
KLEGSASYLKSDQRLSAGYPLEELAGTIFDPPHWRGRLGATWHKDNVTLSAFGNYIGGVT
DDRFSPIEHVKSFTTLDLVGRLRSQARSGIGQGMELTVSIQNLFNEKPGTIQNTIPVYPP
YDSTNYSSIGRVITIAVSKVL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgcgcttctggccggtagcatggtgagcgcaagtccggtcccggcctgggcg
caaaccaaaggccaagcagcgccggtttatgagttcaatctaccggctcaggatctgggc
gatgctctgcaagcggtcgcaaggcgcgccaggctcgaactctacgctacatccagcgat
gtgaacggtgttcgggcgcctgggctcaacggcaagatgtcagtgcgcgaggcgctcgat
atcctgcttggagggaccggactcgaggccgagatttccgagggtgcggtgctcatcatg
aggcccggtcagcggcgcggtgccgaggcggatgaggtctcggacaagcagattatcgtg
accggtacccatattcgcggagctatcccggtcgcccccgttcgaacggcgagccgcgag
gacatcgaggagcaggggcattcggatctgggtgatttcatccggtccatcccggaaaat
tatacaggaggccagaacccgaccgttgccggcggcgggtcgcaaggcgtggacaacgag
aattccagctcttcctccgcgctcaatttgcgcggcctcggcccagccgcgaccctgaca
ctgctcaatgggcacaggatggcatacgacacggtgtcgcagggcgtcgatatctcccag
atccccttggctgcgatcgaccgcatcgagatcgttaccgacggatcttcggcgctttat
ggttcggacgcggtgggcggcgttgccaatgtcatcctgagacgcgactacgaaggcgcc
tatgtctcggcgcgtttgggcggatcgagcgatggcggtaatttccagcagcagtacgat
gccctgacaggcagccgctgggagagcggcgggatcatggtggcaggaagcttctccgat
gtgaccgaaatctctgcccgggaccgctcctacacgcgcagtctcgacgattccacgacg
ctcgttccctggcggcgccagtacagcctgatcgctgccggccaccaggatctcaccgat
cgcctcggcctggaattcgatgcccagtacaacaaccgcgtgacgcagctgtcacagccg
ttcaccacgaccgcggatgtgacgaccaatgggctccaatcgaggcccaaggtccagtct
gcgactgtatcggcgggcttgcactgggacctggggcattcgtggaccgtgtcggcgacg
ggcgtctatggtttcagcaacaatcacattacgtcccatcgctacataggcggggccgag
acgcttcgcacgtggctcaactacgacaacgacgtcgcgaccggcgaagtgaccgccgag
ggggctttgctcgatttgccgggcggcgaggtgcgcctcgctctgggcgcaggctatcgc
cacatgggtcttgatgtctttgtgcgtcaggaaacgggcgggacttcgaacatcacgaag
gacatcaggtccgggcgcgaggtctggttcggctacggcgaactctcgcttccgctcgtt
ggcaaggccaaccgcatgccactcattgagcggttgcagctcagtctcgcggcgcgatac
gaggactatccgggaaccgcgcatctgctgacgccgaaggccggcgttgtctacgagccg
attgaggggctgaccctgcggggcgcctggggcaagtcattcaagacacaaacgctctac
caacagtaccagtaccggcagggttcgctcaatccggcagcctactttcccggctctccc
acgaacctgccggtgctgctcgttgccggcgggaacatcaatctcaagccggagaaggca
acgacctggaacctgggcttcaagcttgcgcccaaggcgctggatggtttcgagcttgaa
gcgacgtggtttgacattcgctaccgcgaccgcgtcgtctcgcccgtatccagcgtcctc
gccatctataccaaccccgtctatgccgactacgtcacgctcaatccgtccactgcgcaa
gtgctcgcagcgatcgcggatctcccgcagggcctcaacaaccagaccggcgagcctttc
gatccctctgcggtcggcgctctggtcgatgcctcgttccagaatgccgcgcgccagcat
ttgcgcggatttgaccttgcagcgcgttatcggatcgaactgggcgaggatgagaccgtc
aaactcgaaggctcggccagctacctcaaaagcgatcagcgcctgagtgcagggtatccg
ttggaagaactggcgggcacgatcttcgatccgccgcactggcgcggcaggcttggcgcg
acctggcacaaggacaatgtcacgctctcggcattcggcaactacatcggcggcgttacc
gacgatcgcttcagcccaatcgaacatgtgaagtcgttcacaacgctcgatctcgtcggg
cgcctgcgctcgcaagcccgaagtggcatcgggcaggggatggaattgacagtgtcgatc
cagaacctgttcaacgaaaagccgggtacgatccagaacacgatcccagtctatccgccg
tacgattcgaccaattactcctcgattggccgggtcatcactatcgccgtttcgaaagtg
ctgtga
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