KEGG   Novosphingobium sp. PP1Y: PP1Y_Lpl475
Entry
PP1Y_Lpl475       CDS       T01515                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:npp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_Lpl475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_Lpl475
Enzymes [BR:npp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PP1Y_Lpl475
Secretion system [BR:npp02044]
 Type IV secretion system
  Trb secretion system protein
   PP1Y_Lpl475
SSDB
Motif
Pfam: P-loop_TraG CagE_TrbE_VirB AAA_10 AAA_22 TraG-D_C AAA_29 AAA_16 ABC_tran FtsK_SpoIIIE AAA_23 DO-GTPase2 DUF87
Other DBs
NCBI-ProteinID: CCA89853
UniProt: F6IC28
LinkDB
Position
Lpl:complement(40746..43169)
AA seq 807 aa
MNLAEYRRRCDCLADFLPWAALVAPGVVLNKDGSFQRTLRFRGPDLDSSTPAELVAVTAR
LNNVLRRLGTGWAIFVEAQRIPALAYPDCDFPDPVSALVDRERCEQFREDGRHFESCYYL
TLLWMPPAEDAARAESWLYEGRTSKGVDPGELLKGYTDRTNRLVQLIEGFVSQLAWLDDE
GTLTYLHSTISTKRQCVRVPETPMHLDALLADEPLTGGLEPKLGDHHLRTLTVTGFPSVT
FPGLLDELNAQGFEYRWSTRAIMLDKADATKAITKIRRQWFAKRKSVAAILKEVMTNEAS
VLLDNDASNKAAEADLALQELGADHAGMAYVTATVTVWDRDPAVAAEKLRLVEKVIQARD
FTVITETVNALEAWFGSVPGHVYANVRTPPISTLNLAHLIPLSAIWAGPERDEHFNAPPL
LYGKAEGSTPFRFSLHAGDVGHTLIVGPTGAGKSVLLALMALQFRRYANSQIFAFDFGGS
IRAAALAMGGDWQDLGGTSQHDGTQGVDLQPLARIDDAQERAWAADWLAAILAGESVQID
PHAREHIWSALTSLACAPREERTMTGLAVLLQSQALKAALAPWCLGGARGQLLDAESEDL
GQASMQAFETEGLVGSGAAAAVLSYLFHRIEGRLDGRPTLIVIDEGWLVLDSPAFAAQLK
QWLKTLRKKNASVVFATQSLADIEGSGIASSIIESCPTRIFLPNDRACEPQITRIYERFG
LNARQIEILSRATPKRDYYCQSQGGNRLFELGLGEIALAFTAASSKSDQLRITQIVEAHG
RDAFAHQWLRHRGLGWAADLLPPKPTG
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgaacctggccgaatatcgcaggcgctgtgattgcctagccgattttctgccctgggct
gcattggtggcgccgggcgtggtgctcaacaaggacggttcgtttcagcgcacgctgcgc
tttcgcggcccagatctcgacagttcgacaccggccgaactcgtcgccgtgacagcgcga
ctcaacaatgtgctgcgccgcctcggaacaggttgggcgattttcgtcgaggcacagcgc
attccggcactggcctatcccgactgtgactttcccgatcccgtttccgcgctggtcgac
cgggagcggtgcgaacaattccgagaagatgggcgacacttcgagagctgctattatttg
accctgctttggatgccgcccgccgaagatgcggctcgcgcggaaagctggctttacgaa
ggacggacaagcaagggcgttgatcccggcgaactgctcaagggctataccgaccgcacg
aaccggttggttcagttgatcgaaggctttgtgtcacaactcgcctggctcgacgacgaa
ggcaccctcacttacctccattccacgatttccaccaaacgccagtgcgtgcgcgtcccg
gaaactccgatgcatctggacgccttgctcgccgacgagccgctcactggcggcctcgag
cccaagctaggcgatcatcacttgcggacattgacagtgacgggatttccgagcgtcacc
tttcccggcctgctcgatgaactcaatgcgcaagggttcgaataccgctggtcaacgcgg
gcgatcatgctcgacaaggccgatgcgaccaaggctatcacgaagatccgccggcagtgg
tttgccaaacgcaagtcggttgcagccatcctcaaggaggtgatgaccaacgaggcatca
gtcctcctcgacaacgatgcatcgaacaaggcggccgaagccgatctcgcgctccaggaa
ctgggtgccgaccatgcaggcatggcttatgtcacggccacggttacggtctgggaccgc
gacccggcagtagcggcagaaaaacttcgccttgtcgagaaggtcatccaggcccgcgac
ttcactgtcattaccgagaccgtgaacgccctcgaagcctggttcggcagtgttccgggt
catgtctacgccaatgttcgaacacctcccatttccactctcaacctcgcccacctgatc
cccctgtcagcgatttgggcggggccggaacgggacgaacatttcaatgcgcctcccttg
ctttacggcaaagccgaaggttcgactccgttccggttttcccttcatgcaggcgatgtc
ggtcatacgctgatcgtcgggccaacgggcgcgggcaagtcagtgcttctcgccctcatg
gcgctgcagtttcgccgatatgcgaacagccagattttcgccttcgactttggcggatcg
atccgcgctgcagccctcgccatgggcggtgactggcaggatctgggcggcacctcgcag
cacgatggcacgcaaggcgtggacctgcagcccctggcgcggatcgacgatgcacaggaa
cgggcgtgggcggccgactggctcgctgcgatcctggctggcgagagcgttcagatcgat
ccgcatgcccgcgagcatatctggagcgcgctcacctcactggcctgcgcgccccgagaa
gagcggacaatgaccggccttgcagtgctcctgcaatcgcaggcgctcaaggcggctctg
gcaccctggtgccttggcggtgcgcgcggccagttgctcgatgccgagagcgaagacctt
ggacaagccagtatgcaggcgttcgagaccgaaggccttgtcggatccggggcggcagcc
gcggtcctctcctatctgtttcatcggatcgaaggccggctcgatggacgcccgaccctc
atcgtgatcgatgaaggctggctggttctggacagtccggcctttgccgcgcagctcaag
caatggctcaagaccttgcgcaagaagaacgcgagcgtcgtttttgcaacgcagagcctt
gccgacattgaaggttccggcatcgccagttccattatcgagagctgcccgacgcggatt
ttccttcccaacgaccgggcctgcgagccgcagataaccagaatctacgagcgtttcggg
ctcaatgcccggcagatcgagatcctgagccgggccacacccaagcgcgactattattgc
cagtcgcaaggcggcaatcgcctgtttgaactcggccttggtgaaatcgctctcgccttc
acagccgcctcctcgaaatcggaccagctgcgcatcacgcaaatcgtcgaggcgcatggt
cgcgatgctttcgcgcatcaatggctgcgtcatcgcggtcttggctgggctgcagacctc
ctcccccccaaaccaactggatga

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