KEGG   Novosphingobium sp. PP1Y: PP1Y_Lpl517
Entry
PP1Y_Lpl517       CDS       T01515                                 
Name
(GenBank) type IV secretion system protein VirB11
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:npp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_Lpl517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_Lpl517
Enzymes [BR:npp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PP1Y_Lpl517
Secretion system [BR:npp02044]
 Type IV secretion system
  Trb secretion system protein
   PP1Y_Lpl517
SSDB
Motif
Pfam: T2SSE Zeta_toxin AAA_16 TrwB_AAD_bind nSTAND3 DEAD FtsK_SpoIIIE Sigma54_activat AAA_30 ResIII CbiA AAA_22 AAA_19 AAA_7 ABC_ATPase RsgA_GTPase SLFN-g3_helicase ABC_tran AAA_28 ATPase Mg_chelatase AAA DUF87 NACHT DUF815 IstB_IS21 nSTAND_NTPase5 AAA_29 AAA_18 TsaE AAA_25 P-loop_TraG MobB MMR_HSR1 Septin CLP1_P AAA_11 PhoH GTP_EFTU RNA_helicase AAA_10 TIP49
Other DBs
NCBI-ProteinID: CCA89856
LinkDB
Position
Lpl:complement(43770..44756)
AA seq 328 aa
MAGQQIRKGAGSRSARMLRTAMGDAIAGWLGDPAIIEIMLNPDGRLWVERLGKGVSDSGL
SLAPSDGERIIRLVAHHVGVDVHDRRPRVSAELPETGERFEGLLPPVVVAPIFAIRKPAV
IVFTLGDYCDAAIMTREQAETMRRAVADRCNILVAGGTGTGKTTLANALLTEVANAADRV
VLIEDTRELQCTAPNMVSLRTKDGVASLADLVRSSLRLRPDRIPIGEVRGPEALDLLKAW
GTGHPGGIGTIHAGSAIGALRRMEQLIQEAVVTVPRALIAETIDLIAVLVRDGHGRRLAE
LARVDGLDPATGDYRLTLYPSQTDGDRP
NT seq 987 nt   +upstreamnt  +downstreamnt
atggctggacagcaaatccgaaaaggagctggatcgcgcagtgcgcgcatgctgcgcacg
gcgatgggcgatgcgattgcgggatggctcggcgatcccgcaatcatagaaatcatgctc
aatccggacggccgcctctgggtcgagcgtttgggcaaaggcgtcagcgatagcggcctg
tcactagctccttccgatggcgagcggatcattcgccttgttgcccatcatgtcggcgtg
gatgtgcacgaccgacgcccccgggtttccgccgaacttcccgaaaccggcgaacgtttc
gaaggcttgctgccgcccgtagtcgtcgcgccgatctttgctatccgcaaacccgccgtc
atcgtcttcacgctcggcgactattgcgatgctgccatcatgacccgggaacaggccgag
acgatgaggcgagccgtcgccgatcggtgcaacatcctggtcgctggcggaacgggcact
ggcaagaccacgcttgccaatgccctgcttacagaagtggcaaatgcagcagaccgcgtg
gtcctgatcgaggatacgcgcgagcttcaatgcactgcgccaaacatggtctccctgcgc
accaaggatggggttgcttcgctagcagatctcgtgcgttccagtctgcgcctgcggccc
gatcgcatcccgatcggggaagtgcgcggccccgaggcgctcgaccttctcaaagcatgg
ggcacaggccatcccggcggcatcggcacaatccatgcgggaagcgctattggtgcgctg
cggcgcatggaacagctgatccaggaagctgtggtcacagtaccgcgcgcgctgatcgca
gagacaatcgacctgattgctgtgctggtccgcgatggccacggccggcgcttggccgaa
ctcgcacgggtcgatgggcttgatcccgcaaccggcgactatcgcctcaccctttatccc
tcacagactgatggagaccgtccatga

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