Novosphingobium sp. PP1Y: PP1Y_Mpl5342
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Entry
PP1Y_Mpl5342 CDS
T01515
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_Mpl5342
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_Mpl5342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
CCA90447
LinkDB
All DBs
Position
Mpl:537688..540021
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AA seq
777 aa
AA seq
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MIGNKHLNCALKLLVTGLLASASTTALAQTAPDSAGGEGGGAPQKASGLEEIIVTARRVS
ESLQDTPVAVSAFTASAIDNKFATDIRGLAGDVPNVVITNVPGFNAASIGIRGQSTGDII
LTFEPAVAVVVDDFVLAHVQTQLFDLFDIDRIEVLRGPQGTLFGKNTVGGVVNVITKRPE
PGFSGEVRLGYSSFNTKDVKAAINIPFTDNLYFRAAGSFQESDGYYHLTKNNDVDGIQGV
PGRGQRWGGSKYFSGRAKLLWEPTADTNIMATYEILRDRGDSPPSVNETPPGFLFDVLGF
PGIQTTGASPFDTGTTLCQGSATAATCPGTLSGHRIDVDGLYLRGEHTLEGAGTITVVGG
WRRVKSSLPSDYTGENAYLFVSTRDDTRKQYSVEARFSSDFSDRIKFTVGAMYWGQKMDA
NATSFLGFLRFLGDPTALTDPNLSTANYKVDSYAVFGEAEYKVADPFSIFVGARYTKENK
SFAVQPQVRRSLVETGFWPQYTDSAKFDRPTMRAGYRWEIAPGINNYFTYSQGYKSGGYN
EQAMSATSALPFKEETADSFEFGLKTETADRVLRVNLAAFYVKYNDLQRDAVVPFIDPIT
GLPGQETRTTNAGKAKVYGLEVEASAAPTEGLTLGAALGWQRAKYLEFFTDVDGDGTNDD
ASYLHLRNAPKWTLSGNARYEFPPAEWGTIALSADVNYQSEFESTTLNADYSQGEARTLV
GASIAWTDPGDRYRIAIFGRNLLDEVYRVSANSVAGLFNFTNYAPPRSFGVEGSAKF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaacaaacacctgaattgcgccctgaaactgcttgtcaccggtctgctcgct
tcggcaagcacgacagccctggcgcagacggcgcctgattccgcaggcggcgaaggcggg
ggtgccccgcagaaggcaagcggccttgaagaaatcatcgtgaccgcaaggcgcgtctcg
gagtcgcttcaggataccccggtcgcggtttcggccttcactgcctcggctatcgacaac
aagttcgcaaccgacatccgcggacttgccggggacgtgccgaacgtggtcatcaccaat
gtcccgggcttcaacgccgcctcgatcggcattcgcggccagtccaccggcgacatcatc
ctgactttcgagccggccgttgcggtcgtcgtcgatgacttcgtgcttgcccatgtgcaa
acccagctcttcgacctcttcgatatcgaccgcatcgaagtcctgcgcggaccgcaggga
acactgttcggcaagaacaccgtcggcggcgtcgtcaatgtgatcaccaagcgccccgaa
ccgggcttcagcggagaggtccgtctgggctattccagcttcaataccaaggacgtgaag
gcggcgatcaacatccccttcaccgacaacctctatttccgcgctgccggttcgttccag
gagagcgacggctattaccacttgacaaagaacaacgacgtcgacggtatccagggcgtc
ccgggtcgcggacagcgctggggcggatcgaagtatttcagtggccgcgccaagctgctg
tgggagccgaccgccgacaccaacatcatggccacttatgagatcctgcgcgatcgcggg
gattctccgccctcggtgaacgagacgccgccgggtttcctgttcgatgtcctgggcttc
ccgggcatccagacgaccggcgccagccccttcgataccggcacgaccctatgccaaggt
tcggccacggcagcgacctgtcccggcaccctgagcgggcaccgcatcgatgtggacggg
ctgtacctgcgcggcgagcacactcttgaaggcgcgggcacgatcaccgtggtcggcggt
tggcgccgggtgaaatcgtcgctgccatcagactacaccggtgagaacgcctacctgttc
gtctccacccgcgacgatacgcgcaagcagtacagcgtcgaggcacgattctcctcggac
ttctccgatcgtatcaaattcacggtcggcgcgatgtactggggccagaagatggacgcc
aatgcgaccagcttccttggcttcctgcgcttcctcggcgatccgaccgcgctcaccgat
cccaacctgtcgacggccaactacaaggttgattcctatgcggtattcggtgaggccgaa
tacaaagtggccgatccgttctcgatcttcgtcggggcgcgctacaccaaggagaacaag
agcttcgcggtgcagccgcaggttcgccgttcgctggtcgaaaccgggttctggccgcag
tataccgacagcgccaagttcgatcgccctaccatgcgcgcgggctatcgctgggaaatc
gcgccggggatcaacaactatttcacctatagccagggctacaagtcgggcggttacaac
gaacaggcgatgtcggccacgtccgcgctgcctttcaaggaagaaaccgctgacagcttc
gagttcggcctgaagacggaaacggcggatcgcgtcctgcgcgtcaaccttgccgctttc
tacgtgaagtacaacgatctccagcgagatgccgtcgttcccttcatcgatccgatcacc
ggtctgccgggacaggagacccgcaccaccaacgctggcaaggccaaggtctacggtctt
gaagtcgaggcgtcggctgcccccaccgaggggctgacgctcggtgccgcgctcggctgg
cagcgagccaagtacctcgagttctttaccgacgtggatggcgatggcaccaatgacgat
gcgtcctatcttcacttgcgcaatgcgcccaagtggacgctcagcggcaatgcccgttac
gaattcccgccggcggaatggggtaccatcgcgctgagtgccgatgtgaactaccagtct
gaattcgaatccacgacgctcaatgccgattactcgcagggcgaggcgcgcactctggtc
ggggcgagcatcgcctggaccgatcccggcgacaggtatcgcatcgccatattcggtcgc
aacctgctggatgaagtctatcgcgtttcggccaactcggttgccggcctgttcaacttc
acgaactacgcaccgccgcgctccttcggcgtcgaaggctcggcgaagttctga
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