KEGG   Nanorana parkeri (Xizang Plateau frog): 108783752
Entry
108783752         CDS       T04897                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013  Nucleocytoplasmic transport
npr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108783752 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    108783752 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108783752 (THOC3)
   03041 Spliceosome [BR:npr03041]
    108783752 (THOC3)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108783752 (THOC3)
Spliceosome [BR:npr03041]
 Complex C
  Other components
   EJC/TREX
    108783752 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108783752 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st DSE1_N WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_TEP1_C eIF2A RMC1_N NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Tricorn_2nd PAC11 Beta-prop_WDR75_1st ASA1 TRM82_WD PD40 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_ACSF4 CFAP251_N Peptidase_S9_N Beta-prop_Nup120_160 Beta-prop_ELP1_1st Cytochrom_D1 CNH WD_LRWD1 Beta-prop_WDR11_1st Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 108783752
NCBI-ProteinID: XP_018407900
LinkDB
Position
Unknown
AA seq 327 aa
MTSVVRLAMSAQVLQEHFRGNCKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVL
EKDRLVKEINFRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRSERCVTTVTTKGEN
INICWSPDGQTIAVGNKDDVVTFIDIKTYRPRAEEQFKFEVNEISWNNDNNMFFLTNGNG
CINILSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDIEELVCVRCFSR
LDWPVRTLSFSFDGKMLASASEDHFIDIAHVETGEKLCEVQCESPTFTVAWHPKRYVLAF
ACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 984 nt   +upstreamnt  +downstreamnt
atgacgtctgttgtgcggcttgcgatgtctgcccaggtgctgcaggaacatttccgtgga
aattgtaagacccgagagttcccggcccacagcgccaaggtgcattcggtggcctggagc
tgtgatggacgccgcctcgcttccggttcgttcgacaagacggccagcgtttttgttctg
gagaaagatcgactggtaaaagaaattaattttcgaggccatggagacagtgtggaccag
ctgtgctggcacccctcaaacccagatctctttgtcactgcttcaggagataagacgatc
cgcatatgggatgttagatctgaaagatgtgtcacgactgttacaacaaaaggtgaaaac
ataaatatctgctggagcccagatggtcagaccattgcagtaggcaataaggatgatgtt
gtcactttcatagatataaaaacgtaccgccccagagcagaggagcagttcaaatttgag
gttaatgaaatctcttggaacaatgataacaatatgtttttcctcactaatggaaatggc
tgcatcaacattctgagctacccagagctaaagccaattcagtcgatcaacgctcaccca
tccaattgcatctgcataaagtttgatcctacggggaaatactttgccacaggcagtgct
gatgccctcgttagtttatgggatatagaagagcttgtatgtgtacgctgcttttcacgt
ttggattggcctgtgagaacactgagtttcagctttgatggaaaaatgttggcgtctgct
tctgaggatcatttcattgacattgctcatgttgaaacaggtgaaaagctgtgcgaagtt
caatgtgaatcccccactttcactgtggcctggcatcctaagagatatgttctggctttt
gcttgtgatgacaaggatggcaagtatgacagtagtcgtgaagctggcactgtaaagttg
tttggtcttcctaatgactcttga

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