Nanorana parkeri (Xizang Plateau frog): 108783849
Help
Entry
108783849 CDS
T04897
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108783849 (PDZRN4)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108783849 (PDZRN4)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108783849 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108783849
NCBI-ProteinID:
XP_018408031
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPHNR
GHGSSQEAHLVNVSTQTDITFEHIMAQAKLRPSTPPVPDICPFLLSDSCHSLHPMEHEFY
EGNEYLSSLPGDGDRTEDFEYEEVELCRLNSQDRLGLTVCYRTDDEEDTAIYVSEVAPKS
IAARDGRIREGDRILQINGQDIQNREEAVILLSSDECRKIVLLVARPDIPLDEGWLDDER
NEFLEELNMQMLEEQHNESVQYTTNEVQQQKKPEEEDGTTDTATSSSNNHEKDSGVGRTD
ESQHHDESSEMENKVKDHRITCLQKNPKLRQSQDTLGSIELQFNDSMVSGEYIDSDPTIS
QEEECERFRQLLELKCQIRNRGEYDLYYSSSTIECSTTEPCGVEHELQLLNEELRSIELE
CQSIMQAHRLQNVRNKTSDILEIHSDDLCNYNTSTDLQRDKVGNLGEHTERSDKDSSSAY
NTAESCRSTPLTVGKSPESTLQRIISITNRKNLSSTIVTNHLTSGLSSIEYTPTKSLTTG
QNSPAEYQDNMLECSKFLDHRKPVPDEIPYLSPYHSSSYRYGNIPVHARHYQSYMQLVQQ
KTAVEYAQSQLNLVTMCRDSQRPLEPRMEWKVKIRSDGTRYITKRPVRDKLLKERALKIK
EERSGMTTDDDMMSEMKMGRYWSKEERKQHLMRAKEQRRRREFMMRSRLECLKESPQSGS
ESKKEISIIELSHRKMMKKRNKKILDNWMTIQELMTHGERSPEGSRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcaatctgtgcacttttcagaagagagaggagcactacaaactgctctatgaa
gtttcccaggttaatgggaaagacctctcaaaggcaacccacgaagaagcagttgaagcc
ttccggaatgctaaagaaccaatagtagtccaagttttaagaagagcaccccataacaga
gggcatggaagttcacaggaagcacaccttgtgaatgtgagcacccaaacagacatcaca
tttgagcatatcatggctcaagccaaactcagaccatccactccaccagttcctgacatt
tgtccttttcttctttcagacagctgccattctcttcatccaatggagcatgaattttat
gaaggtaatgagtatctttccagcctgcctggtgatggagatagaactgaagactttgag
tatgaggaagttgaactgtgccgtctgaatagccaggacagactgggcctaactgtctgc
taccggactgatgatgaggaagatacagcaatatatgtcagtgaggttgctccaaaaagt
attgcagcaagagatggtcgcattcgagaaggagacaggattttgcagattaatggccag
gatatccagaacagagaggaggcggtgattttactttccagtgatgaatgtaggaaaatt
gtccttctggtagcaaggccagacataccgctggatgaagggtggcttgatgatgaaagg
aacgaattcttggaagagttaaacatgcagatgctggaggaacaacataatgaatcagtg
cagtacaccactaatgaagtgcaacagcagaaaaagccagaagaggaagatggtacaact
gacacagcaacttcgtcgtccaataaccatgaaaaagacagtggtgtaggacgtacagat
gaaagtcagcaccatgatgaaagctctgaaatggaaaataaagtgaaagatcacagaatc
acttgtcttcagaaaaacccaaagctaagacaaagtcaagatacattaggaagtattgaa
ctccagttcaatgacagtatggtttctggggaatatatagattctgatcctactattagt
caagaagaggagtgtgaaagatttcgacaactgttagagctgaagtgccaaatccgaaac
cgaggagagtatgacctgtactactcaagcagcactattgaatgtagcacaacagagcct
tgtggagttgaacatgagttacagcttttgaatgaagagttaagaagcattgaacttgag
tgccaaagtataatgcaggcgcaccggctccaaaatgttagaaataaaaccagcgatatt
ttggaaattcacagtgatgatttgtgcaattataacactagcacagacttacagagagac
aaagtgggtaatctcggagagcacacagagagatctgataaggacagttctagtgcgtat
aacacagcagaaagttgtaggagcacaccactgactgtaggcaagtccccagaaagcacc
ttacagagaataattagtatcacaaaccggaaaaatctcagtagcaccattgtgacaaac
catttaacttctggactgagcagtattgagtatactccaaccaaatctcttactaccggg
cagaactctccagcagaataccaagataatatgttagaatgtagtaagttcttagatcat
aggaaaccagtcccagatgaaatcccttatctttcaccataccacagttcatcatataga
tatgggaatataccagtccatgcaagacattatcaaagttacatgcaacttgttcaacag
aaaactgcggtggaatatgcacaaagccagctaaatctagtaacaatgtgcagagattct
caaaggccattggagccaaggatggaatggaaagtaaaaataaggagtgatggcacgaga
tatatcactaaaaggccagtaagagacaaacttctgaaagagcgtgccttaaaaatcaaa
gaagagaggagtggtatgacaacagatgatgatatgatgagtgagatgaaaatgggacga
tactggagtaaagaggaaaggaaacagcaccttatgagggcaaaagagcagagaaggcgt
agagaattcatgatgcgcagtagacttgagtgtcttaaagaaagcccacaaagcggcagt
gaaagtaaaaaagaaatcagtataattgaactaagtcacagaaaaatgatgaaaaagcgg
aacaaaaagatcttagacaactggatgacaatccaagaacttatgacacacggtgaaaga
tctcctgagggttccagagtacataatgcctttttatcagtcactactgtttga
DBGET
integrated database retrieval system
