Nanorana parkeri (Xizang Plateau frog): 108783861
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Entry
108783861 CDS
T04897
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108783861 (SMARCAL1)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108783861 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108783861
NCBI-ProteinID:
XP_018408054
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MSVCLTEEQKRKIEENRQRALARRAERLAVQKNGTNQSAPVSSGVQVSELGGNVQPNRPQ
GFNVPSTKVPGQNNSFEFNSSKTGSSHLQLIGGTGGGVPAQTSVGTAQSYSFDARTEAQP
PCQNAPAPLPAKVDSAAEQCFQPKSIGTMAAPNPSHEPPKLNPYKSSDAPLGAGKDGTGP
EKSTSNVSQFYGTSSKYVSAAENKSATDGREKAGGGGGISDTAQNKKPATAAKGRCIKHA
EDRFRVEVGYNAELIALFKTIPSKSYDPATKMWSFGLEDYTNLMSEVQRIQNVSLKPVEG
MEDVEIPALSKSSSGGAVINTLLAMCKNWQRPSATVKGHCLIISRSRFEVEIGYHVEVIS
LFKQMSSRNYDTKTRKWSFLLEDYQNLIEAISRIQQVEVEPLPRCVVQAFAPQFEKTSLS
RAEIPDVDLSSVDSKLVSSLMPFQREGVSFAISREGRLLLADDMGLGKTIQAICIAAYYR
KEWPLLVVAPSSVRFTWAEAFHRWLPSIRADSINVIVTGRDSQSVSLINIVSYDLLGKMD
KHITANFKVIIIDESHFLKNVKTARCKSAMPLLKSAKRVLLLSGTPAMSRPAELYTQIAA
VRPNFFPRFHDFGHRYCDAKQMPWGWDYSGSCNLGELKLLLEESIMIRRLKSEVLSQLPS
KQRKMVVIAPEGINAKTKAVLAAAAKEMAQGFKSKVQEKEALLQFYNRTAEAKIRCVIEY
IMDLLESGREKFLVFAHHKLVLDSVCEELGKKGVGFIRIDGNTSSADRQSHCQKFQLSDK
INVAVLSITAANMGLTLSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKG
TADDYLWPMIQEKIRILGQAGLSETNFSEMTESANYIYKDPKQQTIYDLFQRSFSQDGGA
DDADEALLLQACEEVDSGALCESAPKKRKIEDFF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtgcctgacggaggaacagaagaggaagattgaggagaaccggcagagggcg
ttggcgaggagggcggagagacttgccgtgcagaagaatggaactaaccagagcgctccg
gtctcttccggtgtccaggtgtcggagctcggagggaacgtgcaaccaaacaggccgcaa
ggctttaatgttccatcaaccaaagtgccgggacaaaataatagttttgagtttaactct
tcaaaaactggaagcagccatttgcagttgataggtggcactggcggtggggtacccgca
cagacctcggttggcactgcccaaagttattcctttgatgcaaggacagaggcacagcct
ccttgtcagaatgcacccgcgcccttacccgcaaaagtggactctgcagccgagcaatgc
tttcagcctaagagcatcggcactatggcagctccaaacccaagccacgagccacccaaa
ctcaatccgtacaagtcttcagacgcacctctgggtgctgggaaagatggcacgggacct
gaaaagagtaccagtaacgtgtctcagttttacggcaccagctccaaatatgtttccgct
gccgagaacaagagcgctacagatgggcgagagaaggcaggcggcggcggcggcatctcg
gatacggctcagaacaagaaaccagcgacggccgcaaaaggaaggtgcattaaacatgct
gaagatcgtttccgggttgaagtgggttacaacgcagagctcattgctttgtttaaaacg
atccccagcaaaagttacgatcctgccaccaagatgtggagctttggcctggaagattac
accaacctcatgagtgaagtccagcgaattcagaacgtgtctttaaaacccgtagaaggg
atggaggatgtggagatcccggcactgtcgaaatcgtccagcgggggcgccgttattaac
actcttctggccatgtgcaaaaactggcagagaccttctgccaccgtgaaaggccattgc
ctgataatttcccgctctcggtttgaagtggagattggataccacgtggaagtcatcagt
ctttttaagcagatgagctctcggaattatgatacaaagaccaggaagtggagctttttg
ttggaggactaccaaaatctgattgaagccatttcccgcatccagcaagtggaagtggag
cctctccccagatgtgtagtgcaggccttcgcgcctcagtttgagaagacgtccttaagt
cgcgccgagatccccgatgtggacctgtcttctgtggattccaaactcgtcagcagcttg
atgccgttccagagggagggagtcagctttgccatttcccgggaaggccgcctactcctg
gctgatgacatgggcttggggaagacgatacaagccatctgcatcgcggcttattatagg
aaggagtggccgctgctggtcgtggctccatcgtctgtcagattcacctgggccgaggct
ttccacaggtggttgccgtctatcagagcagacagcatcaatgtcatcgtgaccggacgg
gacagccaatcagtcagcctcatcaatatcgtcagctacgaccttctggggaagatggac
aaacatattactgcgaacttcaaagtgattatcatcgatgaatcccatttcctgaagaat
gtgaagaccgcgcgctgtaagtctgcaatgcctctgcttaagagcgcgaagagagtcctc
ttactgtccggcactcccgccatgtccagacctgcagaactgtacacgcagatcgcagct
gtcagacccaacttctttccgcgcttccatgactttggtcaccgctactgcgatgccaaa
cagatgccgtgggggtgggattactcgggatcctgcaacctgggcgagctgaagctgctg
ctggaggagtccataatgatcagaaggctgaagtctgaagttctgtcccagctgccctcc
aaacagcgcaagatggtggtcatcgctcccgaaggcatcaacgccaagaccaaggctgtg
ctggcggcagcggctaaggagatggcgcaaggcttcaagagtaaagtacaagagaaagaa
gcgctcctccaattctacaacaggactgcagaagccaaaatccgctgtgttatagaatac
atcatggatcttctagaaagtgggagagaaaagttcttggtgttcgcgcaccacaagctg
gtcttggacagtgtttgtgaagagctggggaaaaagggtgtggggtttattcgtattgat
ggaaacacctcatcggccgaccgccagtcacactgccagaagtttcagctctcggacaag
atcaacgttgccgttttatccattacggctgccaacatggggctgactctgtcatcggct
gacttggtggtgtttgcggagttattttggaacccgggggttctcattcaagcagaagat
cgagtccaccgaataggacagacgagctccgtgaatattcactacctggtggcgaaggga
acagccgatgactatttgtggccgatgattcaagagaagatcaggattctgggccaggca
gggctgtcagagaccaacttttccgaaatgacggaatcagccaactatatttataaggat
ccaaagcagcaaaccatctacgacctgttccagcgctctttctcgcaggacgggggggcg
gatgacgcggatgaagcgctcttactccaggcgtgcgaggaagtggactcgggagcgctg
tgtgaaagtgcgccgaagaaaaggaagattgaggatttcttctga
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