Nanorana parkeri (Xizang Plateau frog): 108783946
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Entry
108783946 CDS
T04897
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr00310
Lysine degradation
npr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108783946 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108783946 (PRDM2)
03036 Chromosome and associated proteins [BR:
npr03036
]
108783946 (PRDM2)
Enzymes [BR:
npr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
108783946 (PRDM2)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108783946 (PRDM2)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108783946 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_11
zf-C2H2_ZNF462_1st
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
108783946
NCBI-ProteinID:
XP_018408164
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MNQDAIKYQEAAESLADVPEHVLRGLPEEVTLCPSSVDKLRLGVWSRKPLPRGKKFGPFV
GEKKKRSQVKNNVYMWEVYYPNLGWMCVDATDPHKGNWLRYINWARSAKEQNLCPLEINR
AIYYKTLKPIEPGEELLVWYNGEDNPEIAAAIEEERAASHRSKKNSPKSRRGRRRSFHGK
KKLNQNKEDKKSSPEVGSFEMKDSSDAPNEDDTKPLGSPVLSLEQTAVIQEMVNQNVLPE
TISITASELHKLPDNRGVEDATTDLELADDLQRESSERDSINQEEESPEMLDDLRSTSDE
TPEGSPKKKSLKISKPKLDVNGELPEGSMFPCQHCERKFTTKQGLERHMHIHISTINHAF
KCRYCGKAFGTQINRRRHERRHEAGPKRKTLMVSCSSELGQSHKHIIDSLKSSDEYSSSR
LQCKMTDSDRETSHSVLSEENGESSRELHPCKYCKKVFGTHTNVRRHQRRVHERHLIPKG
VRRKGHLLEDPHLKSEQSPQVENIYVASTEMEDEGEADDVYIMDITNNISENLTYFIDGK
IPSCSTNTSCDALEVEASTTDVLGINCLLTPIKVEVSQNIRPLQTATDNANPVSDSSCSG
ISEPKRRRTVSPPLLTKIKTEVDLEAVTPSCSLSIPLTVSVSDNLPFQKEKHFYLSSKLK
QLLQTQESNKSPVSPSLLSEIPKLSPAVSSIPTAPNRFKRRTASPPSSPQHSPAPKEFVK
QGEGKTSWNEGLGTKIPKVESHNSSPACSLSGREERENLSPCCEDLKVTKEWTPNISFGN
VCNQQPLDLSSGVKQKCESKSRSQVPWESVLDLSINRKPVCDAEGKDYKGNNLCIGVKKK
KPTTCMLKKVLLNEYDDLEVPGETASQPDADLLSCRTDGGELLPELVAGSSGDIAFSPED
ASPTPVESTCTPVCQSPPVLTPSEAPSPSLCTTFVMDITSPPPLLTTNVPSLPESSCSVP
PTPSCPSPLSVSTQSPLPVLSRTASPTPSLSPTTDDPSGCASPGPPTLSSSSSSSSSSSS
CAASSSSSSCSSPPPLSVVSSIVSPSLNSESSATTFVKQEKQEDETASKDSSQSSHRDSV
SEGFNKTFVCNVCESPFVSIKDLAKHLVVHAEEWPYKCEFCVQLFKDASYLTEHRSVLHG
VGKIFVCSLCKKEFAFLCNLQQHQQDLHADKEYSHHELESGSLRPQNFTDPTKAILLQNQ
RMDEEPMTPEEDGDLNDSSEELYTTIKIMASGEKSKDPDVRMGLNQHYPSFKPPPFQYHH
KNPLGIGTTATNFTTHNIPQTFSTAIRCTKCGKGVDNLPELHKHILVCASASDKKRYTPK
KNPIPLKQTVMPKNSVGVVVLEPAENNSFRRMGQPKKLNFTLEISKMSSGKLKLGALKRK
NQLIHKAILQKNKKARQKSSLRFGMSGSSHVCPYCNREFTYIKSLDKHASFSCPKKPASP
STKKHATKPQKKATSAKKHKISIIRRTADAEIQMQTTEAHLGKTRARSVAPTAPIQLPTI
PIKTKQTVKAGPLVKSKKQNVPIVRNSSPVRISKSQAAQDGKKTKKIPLQVLPHAFGKTA
QKLHVKMQKNKMANKQLVKKKLDKFSGKSRERIGGPRTRSSTDFPDRREDGRQDSRSLY
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggatgcaataaagtaccaagaagcagccgagtcattggctgacgtgcctgaa
catgtgctgagggggcttcctgaggaagtgactctttgtccgtcttctgtggataagctg
agactcggtgtttggtccaggaagcctctcccaagagggaagaaatttggaccttttgtt
ggggagaagaagaagaggtctcaagtgaagaacaatgtgtacatgtgggaggtgtattac
ccaaacctgggctggatgtgtgttgatgccactgacccacacaaaggaaactggctgcgc
tatataaactgggctcgctcagcaaaggagcaaaacctctgccctttggagattaacagg
gcaatatactacaagaccctcaagccaattgagccaggagaggagctgctagtctggtac
aatggagaagacaacccggagatagcagctgctattgaggaagagagggctgcaagccac
cggagcaagaaaaactcacccaaatccaggaggggcaggaggagatcctttcatggtaaa
aagaaattaaatcaaaataaagaagacaagaagagcagccccgaggttggttcattcgag
atgaaggattcctcagatgctcctaatgaagatgataccaagcctctaggctcccctgtc
ctgtctctagaacaaacggctgtgattcaagaaatggtgaatcaaaatgtcctgccagag
acaatatccatcacagcttctgaactgcataaattgccagacaacaggggtgtcgaagat
gctaccactgatttggagctcgctgatgacttgcaaagggagagttcggagagagattct
attaatcaggaagaagagagtccagagatgcttgatgaccttcgaagcacatctgatgag
actcccgaaggttcaccaaagaagaagtcccttaaaatttctaaacccaaattagatgtt
aacggggagcttcctgagggttctatgtttccatgccagcattgcgaaaggaaattcacc
acgaaacaagggctagagagacacatgcacatccacatttccacaatcaaccatgcattt
aaatgccgatactgtggaaaggcatttggaacccagattaaccgcagaaggcatgagagg
cgccacgaagctggccctaaaaggaaaacattaatggtgtcatgttccagtgaacttgga
cagtctcacaaacatatcattgattctcttaaatccagtgatgaatacagcagctctaga
ctgcagtgcaaaatgacagattctgaccgagagacatcacattctgttctctctgaagaa
aatggagaatcaagccgagagcttcacccatgcaagtactgtaagaaagtgtttggaact
cacacaaacgtgaggagacaccagcgcagagttcatgaacggcatcttattccgaaggga
gtgaggcgaaaagggcatcttctggaagatccacaccttaaatcagagcagtccccacaa
gtcgaaaacatttacgtagcaagtacagaaatggaggatgaaggggaagcagatgacgtc
tacatcatggacatcaccaacaacatttctgaaaaccttacctacttcatagatggcaag
ataccatcatgtagcacaaatactagttgtgatgccctagaagtggaggcaagtacaact
gacgtcttaggaatcaattgcttgcttactccaatcaaggttgaagtttcacaaaacata
agaccactgcagactgcaactgataatgcaaatccagtaagcgactcttcctgcagtggg
atttcagaaccaaaaagaagaagaaccgtcagccctcctttgctgacaaaaataaagact
gaagttgaccttgaagcagtaactccctcctgttcgttgtcaattccattaactgtttct
gtaagcgataacttgcctttccaaaaggagaaacatttctatctgtcttcaaagcttaag
caactgctgcagacgcaggaaagcaacaagtctcctgttagtccatcattgttatcggag
atccctaagctgagcccggctgtgtcttccataccaacagcacccaacagatttaaaaga
cgcactgcttctcctccaagttccccacagcacagcccagctccaaaggaatttgttaaa
caaggagaaggaaaaacttcttggaatgaaggacttggtacaaaaataccaaaggtggaa
agtcacaacagttcacctgcctgcagtttatctggcagagaggaaagggagaacttaagt
ccttgttgtgaagatctaaaagttactaaagagtggactccaaatatatcctttggtaat
gtttgcaaccagcaacccttagacttgtccagtggagtaaaacagaaatgtgaaagcaag
agtcgctctcaggttccttgggaatctgtgcttgaccttagcattaataggaagcctgtc
tgtgatgctgaaggaaaggattacaaagggaataacttatgcattggagtcaaaaagaag
aagcctactacatgtatgttaaagaaggttctgttgaatgagtatgatgacttggaggta
cctggtgaaactgcttcgcaaccagatgcagatttactttcctgtagaacagatggagga
gaacttctaccagaactggttgctgggtcaagtggtgatattgctttttctccggaagac
gcttcccccactccagttgagagcacctgtactccagtttgccagtccccacctgttctg
actccttcggaagcaccttcaccttccctgtgtacaacatttgtgatggacattacatct
ccaccacctcttcttactactaatgttccttcactcccagaatcttcctgtagtgtacca
cccactccatcatgcccatcccctctctctgttagcacacagtctccacttccggttctt
tcgcgtacggcgtcaccaaccccttctctttcccctactactgatgatccttctggttgt
gcttcacctggtcctcctactctgtcctcctcctcgtcctcttcatcatcctcttcttcc
tgtgctgcctcatcctcttcatcatcttgttcatctcctcctcccttatctgtggtttca
tcaattgtatctccctctttaaactcggaatcctcagcaaccacatttgttaaacaagaa
aaacaagaagatgaaactgcctctaaagactcttcacagtcaagtcatcgtgactcagtt
tccgaaggttttaataagacttttgtgtgcaatgtttgtgaatccccatttgtgtctatt
aaagaccttgccaaacaccttgtggtgcacgctgaagaatggccctacaaatgtgaattt
tgtgtgcagctttttaaagatgcttcatatcttacagaacatcgctcagtgcttcatgga
gtagggaagatttttgtttgttctttatgcaaaaaggagtttgcttttctttgtaatttg
caacaacatcaacaggacttgcatgctgataaagagtatagtcatcatgaacttgaaagc
gggtctcttcggccacagaactttactgacccaacaaaggcaattttactccaaaatcaa
agaatggatgaggaacccatgactcctgaggaggatggagatttaaatgactcttctgaa
gagctgtatacaacaattaagattatggcttcaggggaaaaatcgaaagaccctgatgta
cgtatgggtcttaatcagcactaccccagtttcaaaccgccaccgtttcagtatcaccac
aagaatcccctgggtattggtacaactgcaacaaactttacaactcataatattccacag
actttctctacagctatacgttgtactaaatgtggaaagggtgttgacaatttacctgag
ttacacaaacatatattggtgtgtgcatcagctagtgataaaaaaagatacactcctaag
aaaaaccccatacccctaaaacagactgtgatgcctaaaaatagcgtaggggttgtggtt
cttgaacctgccgaaaataattcattccgaagaatgggtcaaccgaaaaagcttaatttt
accctggaaatcagtaaaatgtcttcaggcaagctcaaactgggtgcacttaaaaggaaa
aaccagctcattcacaaagcaatattacaaaagaataagaaggccaggcaaaaatcgagt
ctaagatttggcatgtctggttcttctcatgtttgtccatactgcaatcgagagtttaca
tacattaaaagtctggacaaacatgcctctttcagttgcccaaagaagccagcctctcca
tctaccaaaaaacacgctactaaaccacagaaaaaggccacctctgccaagaaacacaaa
atcagcattataagacggacagcagatgctgagatacaaatgcaaacaacagaagcacat
ttgggaaaaactagagcgaggagcgtagcacccacggctccgattcagttacccacaatt
cctattaagactaagcaaactgtaaaagctggccctctggtcaagtccaaaaagcagaac
gtgcccattgtaagaaactccagcccagtgaggatatcgaagagccaagctgctcaggat
gggaaaaaaacaaagaaaattccacttcaggtcctaccacacgcttttggcaaaacggcg
caaaagctgcatgttaaaatgcaaaagaacaagatggcaaacaagcagttggtaaagaaa
aaactggacaagttcagcggtaaatctagagaaaggattggtggacccaggacacgcagc
tcaacagacttccctgacagaagagaagatggaagacaagattctaggagcctgtattaa
DBGET
integrated database retrieval system
