KEGG   Nanorana parkeri (Xizang Plateau frog): 108784552
Entry
108784552         CDS       T04897                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108784552 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npr03021]
    108784552 (TAF5)
   03036 Chromosome and associated proteins [BR:npr03036]
    108784552 (TAF5)
Transcription machinery [BR:npr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108784552 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     108784552 (TAF5)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108784552 (TAF5)
    STAGA complex
     108784552 (TAF5)
    TFTC complex
     108784552 (TAF5)
    SAGA complex
     108784552 (TAF5)
    SLIK complex
     108784552 (TAF5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF12 WD_LRWD1 PEP5_VPS11_N WD40_like Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 108784552
NCBI-ProteinID: XP_018408900
LinkDB
Position
Unknown
AA seq 645 aa
MPAIAWAKILLSRVTAGSAAISSAAHTAGKGVINSGPQDQPDVSAVLSAYTQQGDPALYE
EYYSGLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHENKAKSFFDRFHGDQECYY
EDDLRILASLSKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIVQE
HLYIDIFDGMPRSKQQIDAMVGSLSGEAKREANKVKMFFGLLKEPEIEVPLDDEDEEGEN
EEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRLSP
DFLPTICFYSFLNAYQGLTAVDVTDDSSMIAGGFADSTVRVWSLTPRKLRSVKSTSDLGV
IDKEADDVLERIMDEKTSSEIKVLYGHSGPVYATSFSPDRNYLLSSSEDGTVRLWSLQTF
TCLVAYKGHNYPVWDAQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVISTRF
HPNSNYIATGSTDRTVRVWDVLNGNCVRIFTGHKGPIHALAFTPNGKFLATGATDGRVLL
WDIGHGLMVGELKGHTNTIYALRFSRDGEILASGSMDNTVCLWDAIKAFEDLETDDFTSA
AGHINLNENCQELLLGSYLTKSTPVVHLHFTRRNLLLAAGAFSPQ
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgcctgcaattgcttgggcaaaaattctgctgagccgggtcaccgccggcagtgcggcc
atctcctccgccgcgcacacagcgggaaaaggtgtaataaatagtggcccacaggaccag
ccagatgtcagtgctgttctgtctgcatacacccagcaaggcgatccggctctgtatgag
gaatattacagtggcctaaagcgattcattgagtctgtactggactgccatcgagcagag
ctatctcagttattctaccctctctttgtacacatgtatctggaactggtctacaatcag
cacgaaaacaaagccaaatctttctttgacagattccatggagaccaggaatgttactat
gaagatgatctccgcattttagccagcctctccaagaaggagcacatgaaaggcaacgag
accatgttagacttccgaacaagcaagtttgtgctaagaatatcccgggactcctatcag
ctgcttaagcgccatctccaggagaggcagaacaatcagatatggagcatagtacaggaa
cacttgtacattgatatatttgatggcatgccacgaagcaaacaacagatagatgccatg
gtgggcagcttgtctggggaagccaagcgtgaagcaaacaaagtgaagatgttctttggt
cttctgaaagaaccagagattgaagtccctttggacgatgaagacgaggaaggagaaaat
gaagaaggaaagccaaagaaaaagaagccaaagaaggatagtgttggctcaaaaagcaag
aagcaggacccgaatgcaccacctcagaacagaattcctcttcctgaactaaaggattct
gataaactggataaaatcatgattatgaaggaagctgccaaaagggttcgccttagccct
gattttttgcctacgatctgtttctactcattcctgaatgcttaccagggtttgactgcg
gtggatgttacggatgattccagcatgatcgccggagggtttgcggattctactgtgcgc
gtgtggagtctgacgcccagaaaacttcggagtgtcaaaagcacatctgatctcggcgtg
atagacaaagaagcagatgacgttctggaaaggattatggatgagaagacctcaagtgag
ataaaggttttatatggtcacagcgggcctgtctatgcaaccagcttcagtccagacagg
aattacttattatcaagctcagaagatggcacagtccgtttatggagtctgcagacattc
acctgcttagtggcatacaaagggcataactatccagtgtgggatgcacagttctctcca
tatgggtactactttgtgtccggaggacatgacagagttgctcgcttatgggccacggac
cattatcagcctctacgtatctttgccggccatcttgcagatgtcataagtactcgtttt
catccaaactccaattacatagccacgggctctacagacagaacggtcagagtatgggat
gttttaaatggcaactgtgtgaggatttttactggacacaagggaccaattcacgcattg
gcatttactccaaatggaaagtttctggctactggggcaacagacggcagagtcttgctt
tgggatatcggccacggtttgatggttggagaattaaagggtcacactaacacaatctat
gcacttaggtttagccgagatggagagattttagcatcaggttcaatggataatacagtt
tgtttatgggatgcaataaaagcttttgaagacttggaaacagatgacttcacaagtgct
gcaggacatataaacttgaatgaaaattgccaagagctacttcttgggtcctatctgaca
aaatccacgcctgttgttcatcttcatttcacacgaagaaaccttcttctggctgctgga
gcgtttagcccacaatga

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