KEGG   Nanorana parkeri (Xizang Plateau frog): 108784620
Entry
108784620         CDS       T04897                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108784620 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npr03400]
    108784620 (WDR48)
DNA repair and recombination proteins [BR:npr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     108784620 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 Nucleoporin_N WD40_like RAWUL Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 108784620
NCBI-ProteinID: XP_018408986
LinkDB
Position
Unknown
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPTLNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTDLRNPDLRMLICEEKAPVLKM
ELDRSVDPPVALWVATTKSSVNKWPIKGIMNFRASGDYENDCSTPLSPVCSQPDQVIKGG
ASIIQCNILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKTRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEFWPRTHIN
HMEEEENEVNHVANGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVVDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINVDTESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQILDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcagctcatcacaggcagaacacggccgggcggaggaaagttcaggtctcatacgtc
attagagatgaagtggagaagtacaaccgcaatggagtgaatgctttacagcttgatcct
acactaaataggctttttacagctggccgtgactcaatcatcagaatatggagtgtaaat
cagcacaaacaagacccctacatagcatctatggaacatcatacagactgggtgaatgac
attgtactatgctgtaatggcaaaacattaatatcggcatcgtcagataccacagttaag
gtatggaatgcacacaagggattctgcatgtcaacattgagaacacacaaggattatgtg
aaagccttagcttatgcaaaagacaaagaattagtggcctctgcaggattggacagacag
atattcctctgggatgtaaatactctcaccgcactgactgcatccaacaatactgtcact
acttcttccctgagtggaaacaaagactctatatacagtctggccatgaatcagatgggc
acagtcattgtatctggctccactgaaaaggtgctaagagtttgggaccccaggacttgt
gccaagctgatgaaactgaaaggacatacagacaatgtgaaagcattacttctaaacaga
gatggtacacagtgtctttcaggcagctcagatggcacaatccgtttgtggtctttaggc
cagcagagatgtatagccacctatagggtgcatgatgagggtgtctgggctctccaggtc
aatgaaggcttcactcacgtgtactctggagggagagatcgcaagatctactgtacagat
ctgagaaatccagatctgaggatgcttatctgtgaagaaaaggctcctgttttaaagatg
gaacttgacagatctgttgaccctccagttgccctttgggttgcaaccacgaaatcatct
gttaataaatggcccataaagggtattatgaacttcagagcctcaggagattatgaaaac
gattgtagcacaccgttgagcccggtctgctcccagcctgaccaggttattaaaggggga
gcaagcattattcagtgcaacatactcaatgacaaaaggcacatactaaccaaagataca
aataacaacgtggcctattgggatgttctgaaagcttgcaaagttgaggatttgggaaaa
gtggacttcgaagaagaaatcaaaacgaggtttaagatggtttatgttccaaattggttc
tctgttgatctgaagacagggatgctgaccattactttagatgagagtgactgctttgca
gcctgggtatcggctaaggatgctggcttcagcagccccgatggatctgatccaaaattg
aacctcgggggtctgttattacaagcattacttgagttttggccaagaacccacatcaac
cacatggaggaagaggaaaatgaagtcaatcacgttgcaaacggggagcaggaaaatcgg
atccagaaaggcaatggctattttcaggtgccacctcatactccggtcatctttggtgaa
gcaggtggacgcactctgttcaggctactgtgtagagattccggtggggagactgaatcc
atgctactcaatgaaactgttccacaatgggtggttgatataactgttgataaaaatatg
cccaaatttaataagattccattctacctccaaccccattcatcatcgggagcaaagaca
ctgaagaaggacagactgtcagccagtgacatgctgcaggtcagaaaagtgatggaacat
gtctacgagaagatcataaatgtcgatacagagtctcagacaaccagctcctcaaataat
gagaagccaggagaacaggagaaagaagaagacattgctgtgctggcggaagagaagatc
gaactcttgtgtcaggaccagattctagaccccaatatggacctgcggactgtgaaacat
ttcatctggaagagcggaggtgatctaaccctccactaccgccagaaatccacgtga

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