Nanorana parkeri (Xizang Plateau frog): 108784643
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Entry
108784643 CDS
T04897
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108784643 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108784643 (MID1)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108784643 (MID1)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108784643 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
zf-RING_2
TRIM_CC
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108784643
NCBI-ProteinID:
XP_018409012
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCANNESVESINAFQCPTCR
YVITLSKRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAYDTNNSMTSSEKVLC
QFCDQDQAREAIKTCVTCEVSYCDDCLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHE
DEKVNMYCVTDDQLICALCKLVGRHRDHQVAALADRYDKLKQSLEINLTSLIKRNTEMEM
LLAKLIQTCQHVEVNASRQEAKLMEESDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQI
GNCKQCIERSTSLISQAEQSLKEADHARFLQSAKSTTERVSMATASSQVLIPEINLNDTF
DTFALDFSREKKMLECLDYLTAPSPPVIREELCTASYDTITVHWTSDDEFSVVSYELQYT
IFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSDPGKL
KTNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFLDSG
RHYWEVVISGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNNNWAVRHNNKEIPIEPSP
HLRRIGILLDYDNGSLSFYDALNSFHLYTFDIAFAQPVCPTLTVWNKCLTILTGLPIPDY
LDCIEQLQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtctgaactgacctgccctatctgtctggagctgtttgaggatcca
ctgctgctgccttgcgctcacagcctctgtttcaactgtgcgcatcgcatcctggtctcc
cactgtgccaacaacgaatccgtggaatctattaacgccttccagtgccccacctgtcgt
tatgtcatcacactcagcaagcgtggcttagaaggactcaagcggaacgtgactttgcag
aacatcatcgacagatttcagaaagcatctgtgagcgggcctaattcccctagcgagacg
cgccgtgagcgggcatacgataccaacaacagtatgacatccagtgagaaagtactctgc
cagttctgtgaccaggaccaggcacgagaggccataaaaacatgtgtgacctgtgaagtg
tcctactgtgatgactgcttgaaggcaactcacccaaataagaaaccattcactggtcat
cgtttaattgaacctatccctgactcgcatatcagagggttaatgtgtctagagcatgag
gatgaaaaggtgaacatgtactgtgttacagatgaccaacttatatgtgccttgtgtaaa
ctggtcggccggcatcgagatcatcaggtggctgctcttgctgaccgatatgacaagttg
aagcaaagcttggaaatcaacctcaccagcctcatcaaaagaaacacagagatggaaatg
ctgctagccaagcttattcagacatgccaacatgtcgaggtgaatgcatcacgtcaagaa
gcgaaactcatggaagagagtgatcaattaattgaaattattcaacagagaagacaaatt
attggaacaaaaattaaggaaggaaaggtggtccggctgcggaagctagcccagcagatt
ggcaactgcaagcaatgcatagaacgatccacgtccctcatatctcaggcggagcaatct
ctgaaagaggcagaccatgcacgcttccttcagtcagccaaaagcactacagaaagagtt
tcaatggcaacagcatcgtctcaagtgctgatcccagagatcaacctgaatgacaccttt
gacacattcgctttagatttctccagagagaagaagatgctagaatgtcttgattatctc
acagctcccagccctcctgtgatcagggaagaactctgcacagcatcttatgacacgatt
actgttcactggacatctgacgatgaattcagtgttgtttcctatgagcttcagtacacc
atatttacaggacaagccaatgttgtcagtttatgtaactctgccgacagctggatgatt
gttccaaatattaaacagaaccactatacagtacatggtctgcagagcggcaccaagtat
atcttcattgtcaaggccatcaatcaggctggcagtcggaacagcgaccctggaaaatta
aagacaaacagtcaaccttttaagctagaccccaaatctgcacatcggaagctgaaagtt
tcacatgacaatttgactgtagaaagagacgaaacttcttctaaaaagagccacacacca
gagcgttttacaagccaaggaagttatggcgtagctggcaacgtgttccttgacagtggc
cgccattactgggaagtggttataagtggaagcacctggtatgctgttggcattgcatac
aagtcggcaccaaagcatgagtggataggaaaaaattccgcctcttgggtattgtgtcgc
tgcaacaacaactgggcagtgagacataacaataaggagattccaattgaaccctcacca
cacctgcgccgcattggaattttgttagactatgataatggctctctgtcgttttatgat
gctttgaactcctttcacctctacacttttgacattgcttttgcacagcctgtgtgccca
accctcactgtgtggaacaagtgtctgacaatattaacaggccttcctatacccgattac
ctggactgcattgagcagctgcaatga
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