Nanorana parkeri (Xizang Plateau frog): 108784699
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Entry
108784699 CDS
T04897
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108784699 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108784699 (NUP54)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108784699 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
108784699
NCBI-ProteinID:
XP_018409076
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MAFNFGSATGATTNQGTTGFSLGSFNPKTTAAGFGFGAATTTASTGFGGFGGLESATSNT
TGFNFGGFGLAANPALNFNIGNFSVSTAPAPPFNFGNALASAGGFGGFGTTTTTAPGTGF
SFTAPTNTGTTGLFGNSQNKGFGFGAFGATGTNTGLGTGGLSTGFGLTGFNTQPQQQQQN
VLGGLFGQPAQNANQSNQLYNAASALNAPILLGDERDAIMAKWNQLQALWGTGKGYFNNN
IPPVEFTQENPFCRFKAIGFSCVATNKDEDGLVELVFNRKEADIRAQQQQLVESLHKVLG
AHQTLTVNVEGVRTVPDDQVEVVIYVVERSPNGTSRRVPSSSLQGYFEQANVKANLQQLG
VALTMARTELSPTQIKQLLQNPPAGVDRNIWEQAKIDNPDSERLIPVAMVGFKELLRRLK
VQDQMTKRHQSRLDMISEDISELQKNQATTVAKIAQYKRKLMELSHRVLQVLIKQEIQRK
SGFAIQAEEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEENYYVDAD
LLREIKQHLKQQQEGLSHLITIIKDDLEDIKLIEQGLIDNVHIRGGMFS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaatttcgggtccgctacaggggccacgaccaaccaaggaacaactggcttt
tccctaggaagttttaatccaaaaaccacagcagcaggctttggatttggtgccgctacc
acaacagcatcaacaggatttggcggatttggagggcttgagtcggcaacgtccaacacc
actgggtttaactttggtggtttcggactagctgctaaccctgccttaaactttaatatt
gggaacttcagtgtttccactgctccagcgccacccttcaattttggtaacgccctggca
agtgcaggtggttttggaggctttggaaccacaactactacagcccctggcaccggtttt
agtttcacagcgcctactaacactggcacaactggtctttttggaaacagtcaaaacaaa
ggatttggatttggcgcttttggagcaacaggaacaaacacaggtcttggcactggtggt
ttatcaactggttttggtctgactggcttcaacactcaacctcagcaacaacaacagaat
gttctaggtggactctttgggcagccagcgcaaaatgctaatcagtcaaatcaactgtac
aatgcagcaagcgcacttaatgcaccaatattacttggtgatgagagagatgccatcatg
gcaaaatggaaccaacttcaggccttgtggggaacaggaaaaggttactttaacaataac
ataccccctgttgaattcacacaagaaaacccgttttgcaggttcaaggccattggtttc
agctgtgtagccaccaacaaggatgaagatggtcttgtggaattggtatttaacagaaag
gaagcagacattcgagctcaacaacaacagttagtagaatcattgcacaaagtcctagga
gcgcaccagaccctcactgttaacgtggagggagtcagaactgtgcctgatgaccaagtg
gaagttgtcatatacgttgtagagcgttcaccaaatggaacctccagaagagtcccatcc
agttctttacaaggctactttgagcaagccaatgtgaaggctaatttgcagcagcttgga
gtcgcattaactatggccagaacggagctttccccaacacaaataaagcagctgctgcag
aacccacctgcaggtgtggatcgtaatatttgggaacaagcaaaaatagacaaccctgat
tcagagaggctgatccctgttgcaatggttggcttcaaagagctacttagaagacttaaa
gttcaagatcagatgacaaaacggcaccagagtagactagacatgatatctgaagatata
agtgaactgcaaaaaaatcaggcaacaacagtggctaagattgcacagtacaaacggaaa
ctaatggagctctcccacagagtccttcaggttttaataaaacaagaaattcagagaaag
agtggatttgcaattcaagcagaagaggaacatctgcgtgtgcaactggacaccatccag
agtgaacttaatgctcctacacaattcaaggggagacttaatgaactgatgtcacagatc
agaatgcagaaccactttggagcagtgagatcagaagaaaattattatgtagatgcagat
ctcttgagagaaatcaagcagcacttaaaacaacaacaggaaggactgagccatttaatt
actataatcaaggatgatcttgaagacatcaagctgattgaacaagggttgattgataat
gttcacatacgaggaggaatgttcagctga
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