Nanorana parkeri (Xizang Plateau frog): 108785231
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Entry
108785231 CDS
T04897
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03030
DNA replication
npr03410
Base excision repair
npr03420
Nucleotide excision repair
npr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108785231 (RFC5)
03410 Base excision repair
108785231 (RFC5)
03420 Nucleotide excision repair
108785231 (RFC5)
03430 Mismatch repair
108785231 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npr03032
]
108785231 (RFC5)
03036 Chromosome and associated proteins [BR:
npr03036
]
108785231 (RFC5)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108785231 (RFC5)
DNA replication proteins [BR:
npr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108785231 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
108785231 (RFC5)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108785231 (RFC5)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108785231 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
108785231 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
AAA_16
AAA_assoc_2
AAA_14
DNA_pol3_delta
DUF815
RuvB_N
AAA_24
ResIII
DEAD
AAA_5
AAA_19
AAA_30
ATPase_2
PhoH
AAA_7
TIP49
TniB
nSTAND3
T2SSE
bpMoxR
Mg_chelatase
AAA_25
AAA_2
RNA_helicase
Gp44_lid
Thioredoxin_6
AAA_18
Motif
Other DBs
NCBI-GeneID:
108785231
NCBI-ProteinID:
XP_018409776
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MVPEAKSQSRNLPWVEKYRPQTLDDLISHQDILNTIQRFISEDKLPHLLLYGPPGTGKTS
TILACAKQLYKEKEFNSMVLELNASDDRGIDTVRGPILSFASTRTIFKKGFKLVILDEAD
AMTQDAQNALRRVIEKFTENTRFCMICNYLSKIIPALQSRCTRFRFGPLSSEMMIPRLEH
VVQQENVDISPDGMKALVTLSNGDMRRALNILQSTNMAYGNVTEDTVYTCTGHPLRSDIA
NILDWMLNKDFTTAYKHIMELKTLKGLALHDILTEVHLYVHRVDFPPSVRIHLLTKMADI
EYRLASGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccgaagccaagtcacagagcaggaacttgccatgggttgaaaagtaccgtcca
caaactcttgacgatttgatctcgcatcaagatatcttaaacacaattcagaggtttatc
agcgaagacaaactacctcatctgttactctatggaccaccggggacaggcaaaacttcc
acaattctagcctgtgcaaaacaactttacaaagagaaggagtttaactctatggttttg
gagttaaacgcatcagatgaccgtggtatagatactgtgagaggtccgatattaagcttt
gccagcactagaaccatatttaaaaaaggcttcaagcttgtgatcttggatgaagcagat
gcaatgactcaggatgcgcagaacgctctaagacgagtgattgaaaaattcactgagaac
acacgtttctgtatgatttgtaattatctgtcgaagatcattcccgctctgcagtccagg
tgcacacgcttccgctttggtcccttaagctcagagatgatgatccccagactggagcat
gtagtgcaacaggagaatgtggacataagcccagatggaatgaaggccttagtgaccctt
tccaatggggacatgcgcagagcactgaatatattgcagagtacaaatatggcctatgga
aatgtgactgaagatacagtatatacctgcactgggcatcccttgagatcggacatagcc
aacattctggactggatgctcaacaaggacttcaccacagcctataaacatatcatggaa
ttaaagacactaaagggtctggctcttcatgacatcctgacagaagttcatctatatgtc
catcgagtggattttccaccatctgttcgaatacatttgttgacgaagatggcagatata
gaatacagactggcttctggtaccagtgagaagatacagctgagctccttaatagctgca
ttccaggtcacacgagacttgattgtagctgaagcttag
DBGET
integrated database retrieval system
