Nanorana parkeri (Xizang Plateau frog): 108785243
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Entry
108785243 CDS
T04897
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108785243
Spliceosome [BR:
npr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108785243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_12
NRDE-2
TPR_10
HAT
Motif
Other DBs
NCBI-GeneID:
108785243
NCBI-ProteinID:
XP_018409789
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MAAPRSFSSGGSAGNSSVSDFLTMDCDVLTTEDCSGSDEEEESCVVECNMPPEFNTYWKT
ALEKPYNFIAWTKLVAYSEHQKNLAACRKAYDAFLSRYPLCHIYWKKYADLVQHLGNEQE
VEKIYDRAVQANPLNLTLWINYIQYLKRTLNMTLTKSVDKLRGVFKEAVKAAGMEFHSDE
LWNTYIEFEMQQKNLKEVTVLFDRVLTIPTQQSQPHYERFKAFVSMYSPNEILNTEEWNW
IRSRVELESDNEQIAAEDSDDCKRPDDAFDQQLESKFRVHILKIREQLHLLNEAEVKKRW
TFEEGIKRLYFYAAPINIKQLQNWRKYLQFEISEGQHVRIVLLYERCLMTCALYEDFWLS
YARYMEDHSVEAARSVFERACRIHLPLKYNLHLHWAAFEEKHGCLDSARAILCRLENVIP
GLAIVRLRRVGLERRNGNLQEAERLLKEAVEISAGTKSAGFYAVKLSRLFLKFHRDTHKA
KTVLEEALKKDPDNALLHMSMLEVEMSRNYTEDAPLVCVEQALKCNLSDGSKKILSQRRL
EFIEDFGNSLTSWIDAYNEHQTYLKRKEDDG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaggagtttttcgtcgggaggctctgcagggaattcctccgtgtctgat
ttcctcaccatggactgcgatgttctgaccacggaggactgttccggtagtgatgaggag
gaggaatcctgtgttgtggaatgtaacatgcctcctgagttcaacacctactggaaaaca
gctttagagaaaccgtacaatttcattgcttggactaaactggtagcatattcagaacat
cagaaaaacctggcggcatgtaggaaagcttatgatgcattcctctcacgttaccctctt
tgtcacatctactggaagaagtatgccgacctggtgcagcatcttggcaatgaacaagag
gtggaaaagatctatgaccgtgctgttcaggccaacccgttgaatctcaccttgtggatc
aactacattcaatacctaaagaggactttgaacatgactctgacaaagtctgttgacaag
ttgcgaggtgtgtttaaggaggctgtaaaggctgctggtatggagtttcattcagatgag
ttatggaacacatacatagaatttgagatgcagcagaagaacctgaaagaagttactgtg
ctgtttgatcgagtgcttactatccccactcagcagtctcaaccacattatgagagattt
aaggcttttgtatccatgtattccccaaatgaaatcttgaacacagaggaatggaattgg
atacgctcaagagtagagcttgaaagtgacaatgaacagattgctgctgaagactccgat
gattgtaagagaccagacgacgcatttgatcagcagttggagtcaaagtttcgggtacat
atactcaaaattagagaacagttgcatctccttaatgaagcagaagttaaaaagcgttgg
acctttgaagaggggatcaaacggctttatttctacgctgcaccaataaatattaagcaa
ctgcaaaactggaggaaatatctgcagtttgagatatctgagggtcagcacgtacgcata
gtattactgtatgagcgctgcctgatgacctgtgcgctctatgaggatttctggctgtcg
tatgcacggtatatggaggaccattctgtggaggctgcccgttctgtatttgagagagcc
tgtcgtatccacttaccactgaaatataatctacatcttcattgggcagcatttgaggag
aagcatggatgcttggactctgcccgtgccattttgtgtcgcctggaaaatgtaataccc
ggcttagccattgttcgtttgaggcgtgttggtctagagagacgaaatggaaatctacag
gaggctgaaaggttgttaaaggaggctgtggagatcagtgcaggcacaaagtcggcaggg
ttttatgctgtgaagctttcacggctatttctaaagttccacagagacacacacaaggca
aaaactgtactagaggaagcccttaagaaggatccggataatgctctattgcatatgtct
atgctggaggttgaaatgtccagaaattatactgaagatgctcctctggtttgtgtggaa
caagcattgaaatgtaatctctccgatgggtcaaagaagatcctatctcaaagacgactt
gaatttatagaagactttggcaatagcctgacaagttggatcgatgcctacaatgaacat
caaacatatctgaagaggaaagaagatgatgggtga
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