Nanorana parkeri (Xizang Plateau frog): 108785277
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Entry
108785277 CDS
T04897
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04120
Ubiquitin mediated proteolysis
npr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108785277 (SYVN1)
04120 Ubiquitin mediated proteolysis
108785277 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108785277 (SYVN1)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108785277 (SYVN1)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108785277 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
Endonuclease_7
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108785277
NCBI-ProteinID:
XP_018409834
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MMRTAVMTSASLALTAAVVAHAYYLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRILALMLLLGVLDVLFVSHAYHSLVTRGASVQLVFGFEYAI
LMTMILTVFIKYILHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMVKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQTAAPADQPDPAQQPHAAPA
QQTPIIPPQPNFPPGMLPPFPPNMFPLWPPLGPFPPVPGAPGANAPEEAAHAGSSTASAA
RPSEGATAGGSDSSAGTSMPGFPFPPPFLGMPIFPPFGLPPMPMPPAGFAGLTDEELRAM
EGHERQNLEARLQCLQNIHTLLDAAMLQINQYLAVLANIGPPRPPVPSTQSPPVPTDTAS
SNLTEETPSDVPSEVTNVGPFQDTDTPESVSEEITNGAEGGSTIEEPDAAELRRRRLQKL
GTGSPESH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggacggcggtgatgactagtgccagtctggcactcacagctgcagtggtggca
catgcttattacctcaagaaccagttctacccaacagtggtgtacctaaccaaatcaagc
cccagcatggctgttctctacatacaagcatttgttctggtcttcctattaggaaagttt
atgggaaaagttttctttggtcagttgagagcagctgaaatggagcaccttctggagcgc
tcttggtatgctgttacagaaacgtgtttggctttcaccgtgttccgggatgatttcagc
cctcgctttgtagcactcttcactcttctgctgttcctcaaatgtttccactggcttgct
gaggatcgtgtggattttatggaacgcagcccaaacatttcctggctgtttcattttcgt
attcttgcattaatgctcttgctgggtgttctggatgttctgtttgtgtctcatgcttat
cacagtctggtcacccgcggggcctctgttcagctagtctttggcttcgagtatgccata
cttatgaccatgatcctcaccgtgttcataaaatacatcctgcactctgtggacctgcag
agtgagaacccatgggataacaaagccgtctacatgttatacactgaacttctgacaggg
tttattaaagttttgctgtacatggctttcatgacaatcatggtcaaagtccacacattt
cctttgtttgcaattcgtccaatgtatcttgcaatgagacagtttaagaaggctgtgaca
gatgccatcatgtcaagaagagccatccgcaatatgaacacactgtatcctgatgctact
ccagaagagctccaagcgatggataatgtgtgtatcatctgcagagaggagatggtgaca
ggagcaaagagactaccatgtaaccacatattccacacaagctgcctgcgttcctggttc
cagaggcagcagacatgtcctacatgccgtatggatgttctcagagcttcccttcctgct
cagacagcggcacctgctgaccagcccgatcctgctcagcagccacatgctgctcctgca
caacaaactccaatcattcctccacaacccaactttcctcctgggatgctccctcctttt
ccacctaacatgtttcctctttggccaccactgggtccttttccaccagttcctggagct
cctggagccaatgcccctgaagaagcagcacatgcaggatcttccaccgcatctgccgcc
agacctagtgaaggtgcaactgcaggtggctctgattcatctgctgggacatctatgcca
gggtttccttttcctcctccatttttgggaatgcccattttcccaccatttggacttcca
ccaatgccgatgcctcctgcaggctttgcaggtttaacagatgaggagctgagggcaatg
gagggtcatgaaagacagaacctggaagccaggctgcagtgtctgcaaaatatccatacc
cttctagatgctgcaatgctacagattaatcaatatcttgcagtgttggcaaacattggc
ccccctcgtcctccagtcccttctacgcagtccccaccagtacccacagacactgcttcc
tctaatctcacagaagaaactccttcagatgtcccatcagaggtgaccaatgttgggcca
tttcaagatacagatacccctgaatctgtcagcgaagagataacgaatggcgccgaaggt
ggctcaacgatagaagaaccagatgcagcagaattgcgccgacgtagacttcagaaatta
ggaactggttccccggaatctcactga
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