Nanorana parkeri (Xizang Plateau frog): 108785384
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Entry
108785384 CDS
T04897
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npr04515
]
108785384 (PCDH12)
Cell adhesion molecules [BR:
npr04515
]
Cadherins
Protocadherins
108785384 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF6479
Prominin
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
108785384
NCBI-ProteinID:
XP_018409945
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MARTMKVIRQVFSLLFIYCFHRSFQNSVSLMVRFRIQEEVSLGTVIGRISDASGWTEDAN
EEYKLIQETNTFPVQVGLKNGSISTTGRLDRESLCHVHGRCILSFNVLATKALALVHVEI
EILDINDNEPMFPKAELDVEISESASLRTRIPLDRAWDPDSGSNAVKLYTLSPNEHFTLE
IISGSDGVKHPELVVVKELDRELQSTFSLVLTALDGGYPPKSGITQVRINVLDSNDNSPI
FEESSIILEVSEDTSPGTILINLTATDPDQGPNGEIEFSFSKHTPHHVLSMFSIDPKLGE
IVLKQPLDYESRHSYEIDVQAKDLGPNPIPTHCKVVIKVLDINDNTPDIKVTWATQDSPE
IIVSEAVPLGSFVALVMANDPDSGSNGDAHCHLIQDHEHFRLQKAKGNSYILTTNAILDR
EKWEVYDITIQAQDQGKPSFTAKKSLKIFVRDANDNAPIFQRPIYDVSLYENRGPPTHLL
TVNAQDVDFGENAEVTYKIIDSVISGTPLSTFFSVQSKTGEIVVLKAIDYEEIKEIQFFV
QAEDNGDPRLSSNASVKVLVRDQNDNSPLIVQPQLKRGHASITILVNAESGFFLSASEVT
NSEALGYTSDEILSETAKLNKHPIFQVIATDADSDENAKLLYHLLDDYQGLFAMDEHLGY
IYINSSNASNLIGSVMDLQVTVRDCGIPYQETKAQLTIMFTSHLDHLKNSASETNNKLSL
SVVIVICLSVLLVVCLLILALIMSFCRVDRKDNRAYNCREEESAYRKQPRRPQRQIQKAD
IHVVPVLRGRQQPQPVTPVEEAKLFPMPDEGQEVPEDQTLHTPFHLTPRLYRTLRHHHNQ
EILSEDTTDLEQSFSLPASVCRTLQYQRQRSYSRENFEDYNGTLPFSNKTLKNPGSPQIR
VHDNVSSSEPMIFNEESFSPATSLTLRRQKNAEQSSKEQILRSLVRLSMVALAEKEAVEL
TMQSPHVQQISQLLSMLHQGQVHPKTLHRGNKYSSKSGRTGGQETDGQSTKDSGHGESEA
GDLDSESGGDFSTSHNFLEDNLETLLGPHAGSKGNRLSDLDPGWIARLSLPLANSYKENI
FTPNDQITLEPPITASEKEDLRTFLTFGKASDGSQDNRLASTFLSEMSTLFEMLLTQKAE
SHGDTASEVLMRLSACSKSMDSRNDGTRN
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggctcggacaatgaaggtgatcagacaggtcttcagtcttctttttatctactgcttc
cacagaagttttcaaaattcagtttctttaatggtgaggtttcgcattcaggaggaagta
tcccttggcacagtgattggacgtatatctgatgcatcaggctggacagaggatgcaaat
gaagaatacaagcttatacaagagaccaacacttttccagtacaagtgggtttgaaaaat
ggatctataagcaccacaggtcgtctggacagagaaagtctttgtcatgttcatggacgc
tgcattctgtcttttaatgttctagcaaccaaggccttagctctagttcatgtggaaatt
gaaatcctggacatcaatgataatgaaccaatgtttccaaaagctgaactagatgtagag
atctctgaaagtgcttcccttcgtaccagaattccacttgacagagcttgggaccctgac
agtggcagcaatgctgtgaaactatatactctctctccaaatgaacactttacattggaa
attatttctggttctgatggtgtcaaacatcccgaactagtggtggtaaaagaattggac
agagaactgcaatctactttcagccttgtgttaacagcattagatggaggatatccaccg
aaatcagggataacacaggttaggattaatgtgttggactccaatgataacagccctatt
tttgaggaaagctctataattttagaagtctcagaagacacatcacctggtacaattctt
ataaatctcacagctactgacccagatcaaggcccaaatggggaaattgagttttcattt
agcaaacacacaccccaccatgttctcagcatgtttagtattgaccccaagttaggtgaa
atagttctgaaacagccacttgactatgaaagcagacattcttatgaaatagatgtacag
gcaaaagatttgggccctaatcccatccctactcattgcaaggtagtcattaaagttctg
gatattaatgataacacccctgatattaaagtcacttgggctactcaagattcccctgag
atcattgtgtctgaggctgttccattgggcagttttgttgctttggttatggcaaatgat
ccagattcaggttcaaatggagatgcgcactgtcaccttattcaagaccatgaacatttt
aggcttcaaaaagctaaaggaaacagttatatactgaccaccaatgccattcttgacagg
gaaaaatgggaggtgtatgacataactatccaagcccaagatcaaggtaaaccgtctttt
acagctaaaaagtcattaaaaatatttgttcgcgatgccaatgacaatgctcccattttt
cagaggcctatatatgacgtttcactatatgaaaacagaggtcctcccactcatcttctc
actgtaaatgctcaggatgttgactttggtgaaaacgcagaggttacctacaagattatt
gactctgttatctcagggacaccactatctacctttttctctgtccagtccaaaacaggt
gaaattgttgtgcttaaggccattgattatgaggaaataaaagaaatccaattctttgtc
caagcagaagacaatggtgatcctcgactcagcagcaatgcttctgtcaaggtgttggta
agagaccaaaatgacaatagcccattaatcgtgcaacctcaacttaaaagaggccatgcc
agtatcaccatccttgtgaatgctgaaagtggattctttctttctgcctcagaagttacc
aactcagaggctttaggatacacatcagatgagatattatcagaaactgccaaacttaac
aaacacccaatatttcaagtaattgccactgatgcagactcagatgagaatgctaaactt
ctctaccatctgttggatgactatcaaggattatttgctatggatgaacatcttggatac
atatacataaactccagcaatgccagcaacctaataggtagtgtcatggacttacaggtc
actgtcagagactgtggaattccatatcaggaaaccaaagctcaactaacaattatgttc
actagccacttggaccacttgaaaaattcagctagtgaaaccaataataagctgagtctg
tctgtggtaattgttatttgtctgtctgttcttctagttgtatgtctcctcatattggca
ctcataatgtccttttgtcgagtagatagaaaggacaacagagcatacaactgcagggag
gaagaatctgcctataggaagcaaccaagaaggcctcaaaggcagatacagaaggcagat
attcatgtagtacctgtacttagaggtcggcaacaaccacaaccagtgacaccagtagag
gaggccaagttatttcctatgccagatgaaggacaagaagttccagaggatcagactctc
catactccttttcatctcacacctagactatatcgcacactgaggcaccatcataaccag
gaaatattaagtgaagatactacagatttagagcagtctttctcattacctgcctctgtg
tgtcgaactttacagtatcagagacagagaagctactctagagagaactttgaagactac
aatggaactcttccatttagtaataaaaccttaaagaacccaggtagtcctcaaataaga
gtccatgataacgtcagctcttctgaacccatgatattcaatgaagaaagcttttctcca
gcaacttctctcactctaagaagacaaaagaatgctgaacaatcatctaaagagcagatc
ttgagaagcctggtgcgactctcgatggtggcactagcagagaaggaagctgtggaactt
accatgcagtcaccacatgtgcagcaaatttcacagcttttatctatgctccaccaaggg
caagttcaccccaagacacttcacagaggaaacaagtactcatctaagtctggcagaact
ggcgggcaagagactgatgggcagagcacaaaggacagtggccatggtgaaagtgaagct
ggggatctggactctgagtctggaggtgacttctctactagccataacttcctggaggac
aatctcgagactcttctgggccctcatgcaggttctaaaggcaaccgcttgagtgatctc
gaccctggatggatagctcggctctccttacctttggccaacagctacaaggagaatatt
ttcactcctaatgatcaaataactctggagcctccaatcacagcatcagagaaagaagat
ctaaggaccttcctaacatttggcaaagcttccgatgggtcacaagataacagattggcc
agcacttttctctctgaaatgagcaccctcttcgagatgctgttgacacagaaagccgag
tcgcatggggatacagcttccgaggtgctaatgagactttctgcctgcagcaagagtatg
gatagtagaaatgatggcactaggaactaa
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