Nanorana parkeri (Xizang Plateau frog): 108785387
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Entry
108785387 CDS
T04897
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03022
Basal transcription factors
npr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108785387 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
108785387 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108785387 (ERCC3)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108785387 (ERCC3)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108785387 (ERCC3)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108785387 (ERCC3)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108785387 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
DEAD
Helicase_C
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
108785387
NCBI-ProteinID:
XP_018409947
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MGKKDKSDRDKKKSKKRHYDEDEDDDDELPGNDQEAVPSAAGKQVDETATKVDEYGAKDY
RSQMSLKADHSSRPLWVAPDGHIFLEGFSPVYKYAQDFLVAISEPVCRPQHVHEYKLTAY
SLYAAVSVGLQTSHIIEYLQKLSKTGVPEGIVQFIKLCTVSYGKVKLVFNFSRYFVESAH
PEVIQDLLQDSIIRGCRLRNEEGEETELITETYTSKSAISKASDPASAPSTSQVPETQNK
ADVPTDLIDFYEQMDKEEEEEEETQTVSFEVKQENIELVQKQCIHLEYPLLAEYDFRNDT
MNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSW
EAERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILFYTMNPNKF
RACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNNASNSPSQAGQTPFSRHLAVCEDDQ
FRQKLLVQTSADHTLCLGVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGTI
SKKPNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFCTKEDQQL
LLQKVLAASDLDAEEEVVAGEFGSKSTHMARRFGTMSSMSGADDAAYMEYHTTRNKNAAG
KHVHPLFKRFRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaggacaagtctgatagagacaagaagaaatcgaagaagcgtcactatgat
gaggatgaggatgacgacgacgaactgcccggcaacgaccaggaggccgtgccctctgcc
gccgggaagcaggtggatgaaaccgccacaaaagtggacgagtatggagctaaagattat
cgatcgcagatgtcgctgaaggcggatcactcgtcccgtccgctgtgggtggcaccggac
ggtcacatcttcctggaaggtttctcccccgtctataagtacgcgcaggacttcctggtg
gccatctccgagccggtctgcagacctcagcacgttcacgagtataagctcacggcgtac
tctctgtacgcggcggtcagcgtgggcctgcagaccagtcacattatcgagtatttacag
aagctcagcaaaaccggcgtcccggagggcatcgtacaattcatcaagctctgtaccgtc
agctatggaaaagtgaagctggttttcaacttttccaggtactttgttgagagcgcccat
cccgaagtcatccaggacctcctgcaagattccatcatccgtggctgcagactccgcaat
gaggagggcgaggaaaccgaactcatcaccgaaacgtataccagcaagtcagcgatctct
aaggccagtgaccccgccagcgcaccctccacctcccaggttcccgagacgcagaataag
gccgatgtccctactgacttgattgatttttacgagcagatggacaaggaggaagaggag
gaggaagaaacacagacggtgtcctttgaggtcaaacaggagaatattgagttggtccag
aaacagtgcatccacctggagtatcccttactggcggagtacgacttcaggaacgacacc
atgaatccagacatcaacatcgacctgaagcccaccgccgtcctccgaccgtaccaggag
aaaagcctgcgcaagatgtttggcaatgggcgcgctcgatctggcgtgattgtcctgcct
tgcggtgcgggaaagtctctggttggcgtcacggcggcctgcacggtccggaagaggtgt
cttgtgttggggaattctgccgtttcagtggaacagtggaaagcgcagtttaagatgtgg
tccaccattgacgacagccagatatgtcgctttacatcagacgccaaggacaaacccatc
ggctgctctatcgccatcagcacctactccatgttggggcataccaccaagaggtcctgg
gaagccgagagggtgatggagtggctaaaaagccaggagtggggtctgatgattctggat
gaggtgcacaccattccagctaagatgttccgtcgtgtcctgaccatcgtccaagcgcac
tgcaagctcgggctgaccgccacattggtccgagaagatgacaaaattgtcgacttgaat
ttcctgattggccccaagttatacgaggcgaactggatggagctgcagaacaacggctac
attgctaaagtgcagtgcgccgaggtctggtgccccatgtcgcccgagttctacagagag
tacgtggccatcaagacaaagaagcgcattctcttctacaccatgaacccaaataaattt
cgtgcttgccagttcctgattaagttccacgagaggaggaacgacaaaataattgtgttc
gccgacaatgtcttcgcgctgaaggagtacgccatccggctgaacaatgcctcgaattct
ccttcccaagctggccagacacccttctcccggcatctggcggtctgtgaagatgaccag
tttagacagaagttgctggtccagacaagtgccgaccacactctttgtttgggggttgga
gacacgtccttcgatttacctgaagccaacgttctgatccagatctcctctcacggaggg
tcccgaagacaggaagcgcagcgtctgggacgtgttctgagagcgaaaaaaggtacaatt
tctaaaaagccaaatgcattcttctattctctggtgtctcaggatacgcaggaaatggcg
tactccaccaaaaggcagagattcctggtggatcagggctacagctttaaggtgatcacc
aagctggccgggatggaggaagaggatctggcgttctgcaccaaggaagatcaacagctg
ctcctgcagaaggtcttggccgcctccgatctggacgcggaggaggaagtggtggccggg
gaatttggatcaaagtctactcatatggcgcgccgtttcgggaccatgagttccatgtcc
ggagcagacgatgcagcttatatggagtaccacacaactcggaacaagaatgccgccggc
aaacacgtacatcccctcttcaaacgtttcagaaaatga
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integrated database retrieval system
