Nanorana parkeri (Xizang Plateau frog): 108785436
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Entry
108785436 CDS
T04897
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108785436 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
npr04990
]
108785436 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
npr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108785436 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
Motif
Other DBs
NCBI-GeneID:
108785436
NCBI-ProteinID:
XP_018410000
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLNDGGKAAKAYIGIGDVVLTIDGIRTDG
MTHLEAQNKIKACTGSLSLTLQKAAAAPKTNPNPAQVETLKEIIKPVPIATPATPAAPKI
NTSANMTYNKAPRPFGAPSPSKPASIPSPSSAFSPASASQTSSQLSALSLLSAVNPPPPI
TSGVHANYKSATDGQSPALSATKTAVNVPRQPASYNSAVNLYANETAQDGADVQRRGQKE
NLGDEPQNGKPPPKRPPRKHIVDTNTDFYHTPIYSDASKKRLIDQTEDWHPRTGTSQSRS
FRILAQMTGTENLTEPEPDNVKNDPLETTPVATYSAEPAKNMPSSYKSGPAAYKPSGSSS
NTKSAGLQPASSTGRITNPPSTRTPASDNKPFVPPPMDDQDTLFQRAEHIPAGTRTPMCA
ICNLVIRGPFLLALGKSWHPEEFNCAHCKKNMAEIGFVQEKGALYCEICYEKFFAPDCAR
CQRKILGEVINALKQTWHVTCFVCVACNIPIRNSVFHLEDGDPYCEKDYYTLFGTMCHGC
EFPIEAGDRFLEALGNTWHNTCFVCSVCCESLEGQTFFAKKDKPLCKKHAHAVNI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtatctctggttggcccagctccctggggcttcagacttcaaggt
ggcaaagactttaacatgcctctcactatctccaggcttaacgatggagggaaggctgct
aaagcgtatatcgggatcggtgatgttgttcttaccattgatggcataagaacagatgga
atgactcatttagaggcacaaaacaagattaaagcatgcactggatcattgagtttgact
ttgcaaaaggctgcagctgctccaaagaccaatccaaaccctgcacaagttgaaactctc
aaagaaataataaagcctgtgcctattgcaactcccgctacacctgctgcacctaagatc
aacacttcagccaatatgacctacaacaaagctcctagaccatttggggccccatcccct
tccaagcctgcttcaatcccatcaccatcctcagccttttccccagcctctgcaagccaa
acctcctcacagctctctgctttatccctgctgtctgcagtcaacccacctcctcccatc
acatccggagtgcatgccaattataaatctgccacagatggccagtcacctgctttaagt
gcaactaaaactgcagttaatgtcccacggcagcctgccagctacaattcggctgtcaac
ctgtatgctaatgagactgcacaagatggggctgatgtgcagagaagaggacaaaaggaa
aacctgggtgatgaaccacaaaatgggaagcctccacctaaacgtcctcctcggaaacac
attgtggacacaaacacagatttttaccatactccaatttatagcgatgccagcaaaaag
cgtctcatagaccaaactgaagactggcatccacgcaccggtacttctcagtcacgttct
ttccgaattcttgctcagatgactggcactgaaaacctgacggaaccagagcctgacaat
gtgaaaaatgatccactggaaactaccccagttgctacctattctgctgaaccagctaag
aatatgcccagttcatacaaatctgggccagctgcatacaaacccagtggttcctcaagc
aataccaaatcagcaggcttgcaaccagcatcttctactggaagaatcacaaatccgcct
tctacaagaacacctgcatccgataacaaaccctttgtaccacctcctatggatgatcaa
gatacattgttccagagggcagaacatatacctgccgggacacgcaccccaatgtgtgct
atctgcaacctagtcattaggggaccatttttgttggctttggggaaatcgtggcatcca
gaagaattcaattgtgctcactgcaagaaaaatatggcggagattggctttgttcaggag
aaaggtgctctctattgtgaaatttgttatgagaagttctttgcaccagactgtgcccgt
tgccaaaggaagatacttggtgaagttatcaatgcattgaagcaaacttggcacgtcaca
tgctttgtttgtgtggcctgcaacattcctattcgaaacagcgttttccatttggaagat
ggagacccttactgtgagaaagattattataccttatttggtacgatgtgtcatggatgt
gagttccctattgaagctggagacaggttcctggaggcactgggaaacacatggcacaac
acttgctttgtgtgttcggtatgttgtgaaagtttggagggacaaactttttttgcaaag
aaagataaaccactatgcaagaagcatgctcatgctgtgaatatctga
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