Nanorana parkeri (Xizang Plateau frog): 108785827
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Entry
108785827 CDS
T04897
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108785827 (HTT)
04131 Membrane trafficking [BR:
npr04131
]
108785827 (HTT)
03029 Mitochondrial biogenesis [BR:
npr03029
]
108785827 (HTT)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108785827 (HTT)
Membrane trafficking [BR:
npr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108785827 (HTT)
Mitochondrial biogenesis [BR:
npr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108785827 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_ECM29
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
108785827
NCBI-ProteinID:
XP_018410480
LinkDB
All DBs
Position
Unknown
AA seq
3098 aa
AA seq
DB search
MATMEKLMRAFESLKSFQQQQQGPTVPEEPLPRAKKDPSTNKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKVVKALMDSNLPRLQLELYKEI
KKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTKICKRQEESVQETLAAAIPK
IMAAFGNFANDHEIKVMLKAFVANLKSSSPTIRRTAAGSAVHICQHSRRTQYFYTWLLNV
LLGLLIPIEDEQPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKEAEISPSREQL
TQVYELTLHYTQHRDHNVVTGALELLQQIFRTPPIELLNVLTCSGGIQHVTICRDESQNR
SRSGSIVELIAGGSSACSPALSRKQKGKMHLGEEEGLEDEAEGKSDATTAPFTAGSKKEG
SSEVATSSGVPTAASAATLDSSAHDIITEQPRSQHTLQSDSVDLSNSDVPSTVTEGDEED
ILSRSSSQISTVQSDANMDLNEGTTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVIDGAE
NLYSGMQIGQLQDEEDEGAIIHQEELVDRFGNMSLGLNQSHLLKSLGHSRQSSDSSVDRF
VTKEEVVEPGDLENKPSRIKGDIGHYTDGNAAPLVHCVRLLSASFLLTGQKGALVPDRDV
RVSVKALALSCIGAAVALYPEAFFNKLYKLQTDAMEPTDVQYVSDILNYISHGDPQVRGA
TSILCGTIVFSILNKSRYDAERWLAIVKSCSGNSFSLEDCIPLLQKCLKDESSVTCKLTC
VAVRHCISSLLCSTYSEHGLQLMIDLLTLKNSSYWLVRTELLETLAEIDFRLVNFLEGKA
DGLHRGVHHYTGRLHIQDRVLNGVIISLLGDEDARVRHVATATLAKIVPRLFFHCDQGQA
DPVVAAARDQSSVYLKLLMHETQPASHFAVSTITRIYRGYSIMQSPTDVTMENNLSKVIT
AVSHALTTSTTRALTFGCCEALCLLSSVYPVSTWSVGWHCGISQQSPSEEPRKSCTAGMA
NMILSLLSSAWFPLDLSAHQDALILAGNLMAATATKSLKNPWTGEDEANPTATKQEEPWP
ALGDRLMVGVVDQLFIHLLKAINICAHVIDDVPPGPVVKTTLPSLTNPPSLSPIRRKGKE
RESAEQTSVPLSPKKVSDTTPASRQTDASGPAQTSKSLGSFYHLPSYLKLYDVLKATYAN
YKVTLDLQSNNEKFGGFLRSALDVLSQILELATLTDIGKCVEEILGYLKSCFNREPVMVT
ICVQQLLKTLFGTNLASQFEALCSNPSKTQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQA
LADASLRNMVQADQEYDPSGWFDVLQKVSSQLKNSITNVTKHRADKNTIHNHIRLFEPLV
IKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRE
SEAIIPNVFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDL
FVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQ
IADIILPMLSKQQMHIDSHDALGVLNTLFETLAPSSLRPVDMLLRSMFVVPYTMASVSTV
QLWISGILAILRVLISQSTEDIVLSRIQELSFSPLLISCQNIAKLRDGDNNHQNTENGAE
QNQTKAPPEETFSRFLLQLVGILLEDIVNKELKVDLTEQQHTFYCQQLGTLLMCLVHIFK
SGTFRRITNAASRLFKGDGDNGNYYYTLESLSDLVESMFPTHPSLVLLWCQFLLLIDYTN
YNWWSEVHQTLKRNSLSSTKLLLSPQMSTDSDEPHPESKLGMCNREIVRRGALILFCDYV
CQNLHDSEHLTWLIVNHVQDLIYLSHEPPVQDFISAIHRNSAASGLFIQAIHSRCENLAT
PTSLKKTLQCLEGIHLSQSGAVLMLYIDKLLCTPFRVLARMVDTLACRRVEMLYFVSLQN
SMSQLPLEELDRIQEYLQSSGLAQRHQRLFSLLDRYRVTVDSDTVSPLPLMTSHPLDGDS
HPRLETLDPDEEWYVSLVRSQCYTHSDSALLEGAELVNRIPQADRLAFMTNKEFNMSMLA
PCLSLGVNQMIGDQDSSFFETAQSVLLDLISQTVQQLPDTHQIFQPLKPMEKDSYWEKII
TVLGDSEVYYSLVTLCRALAQYLLSLPKIPQSFHIRQENEVDMVKFVVMSVEALSWHFVQ
ELIPLGVDLQAVLECCCLTLQQPGLWNLLASAEYVTHGCSLITCIRFIIEAVAVQPGEQL
LSPERKKNASPEDQAGEEGHSGVRGTQGALFLKTACTMMSEMVDSLQTVLLFGHKKSCHI
AAFLTPVLQNIVVSLARLPAVNSYNRVPPLVWKLGWSPKTGGEFGTSLPEIPVEFLQEKE
VFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPIVMDQEESQQEEDTERTQINVLAVQ
AITSLVLSAMTIPSAGNPAISCLEQQPRNKTLKALDTRFGRKLSVVRGIVEEEIQALVSR
RDNIATHHAYQAWAPVPCLSAATTGALISHEKLLLQINTEREIGNMSYKLGQVSIHSVWL
GNNITPLRPEELDEDEEDETDAPAPSSPPLSPINSRKHRAGVDIHSCSQFLLELYSQWIL
PANTGKKTPVILVSEVVRSLLAVSDLFTERNQFEMMYTALTELQKQHPSEDEILIQYLVP
AICKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYVLECDLLDDTAKQLIP
IISDYLLSNLRGIAHCVNLHNQQHILVMCATAFYLIENYPLDVGPDFTAGIIQMCGVMVS
GSEESTPSMIYHCVLRGLERLLLSEQLSRLDGEALVKLSVDRVNMHSPHRAMTALGLMLT
CMYTGKEKISPGRTTDPSPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFL
DDFFPPQDVMNKVIGEFLSNQQPYPQFMAAVVYKVFQTLHATGQSSMVRDWVMLSLSNFT
QRTPVAMAMWSLSCFFVSASTSKWISAILPHVISRMGKSEPVDVNLFCLVAIDFYRHQID
EELDRRAFQSVFELVAAPGSPYHSLLMCLQNVHKTTVF
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatggagaagctgatgagagccttcgagtcgctgaagtccttccagcaacag
cagcagggacccaccgtgcctgaggagccgctaccccgagcgaagaaagatccatcgacg
aacaagaaagatcgcgtgaatcactgtctgacaatatgcgagaacatagttgcccagtct
ctgaggaattctcccgagttccagaagttgctggggatcgccatggagctcttcctgttg
tgcagtgatgacgcagagtctgacgtcaggatggtggctgatgagtgtctcaataaagtg
gtgaaagctttgatggattcaaaccttccaaggctacagcttgagctgtacaaagaaata
aaaaagaacggtgccccgcggagcctcagagctgccctctggaggtttgctgaactggca
cacctcgttcgacctcagaagtgcaggccttacttggtgaacttgcttccttgtctcaca
aaaatatgtaagcgccaggaagaatcggtacaggagacacttgctgctgctattccaaaa
atcatggctgcttttggaaactttgcaaatgaccatgaaatcaaggttatgctaaaagct
tttgtagccaatctaaaatcaagttctcccacaatccgccgcacagcagctggttctgcc
gtccatatttgccagcattcccggagaacgcagtatttctacacgtggcttctcaacgtc
cttctgggtcttctcattcctattgaagatgaacagccaactctcttaatcttgggagtc
ttattaacactacgctacctgatcccattactacaacagcaagtgaaggacacaagtctc
aaaggcagctttggggttaccagaaaagaagctgaaatatcgccatctcgagagcagcta
acacaggtttatgaactgacattacattatactcagcacagagatcataatgtggtgacg
ggtgctctggagctgttgcagcagatattcaggacgcctcctattgagctgctcaatgtc
ctgacatgttctggaggcattcagcatgtcaccatttgtcgagatgagtctcaaaaccgt
agccgcagtggtagcattgtggagctcatagccggcgggagctctgcctgcagtcctgct
ctgtccaggaaacaaaaaggtaagatgcacttgggagaagaggaaggattggaagatgag
gcagaaggcaagtctgatgccaccactgctccttttacagctgggtctaagaaggaaggc
tcctctgaagtggctacatcctctggtgtccctactgcagcatctgctgccactctggac
tcttcagctcatgacatcatcactgagcaaccacggtcccaacacactttgcagtctgac
tctgtagatctcagcaactcggatgtccccagcactgttacagagggggacgaggaagac
attttaagccgcagttccagtcagatcagcactgtccagtctgacgccaacatggacctg
aatgagggaaccacccaggcttcctcaccagtgagcgacagctctcagaccaccacagaa
ggtccagactctgctgtcaccccttcggacagctcggaaattgtaatcgatggtgctgag
aacctgtattccggcatgcagattgggcagctccaggacgaggaagacgaaggagcgatc
atccaccaagaagagttggtcgatcgttttgggaacatgtctcttgggctgaatcagagt
catttactaaaatccttgggccacagccgccaatcatctgatagcagcgtggatcgcttt
gtaacaaaggaggaagtggtggagcctggcgacctggagaataagccgtctcggataaaa
ggagatattggacactacacagatggaaatgctgctccccttgttcactgcgttcgcctg
ttatctgcttccttcttgctcactggacagaagggtgctcttgtaccagacagagatgtg
cgggtgagtgtgaaagcactggcattgagctgtataggggcagctgtcgctttgtatcct
gaggccttcttcaacaagctgtacaagctgcagacagacgctatggagccaacagatgtg
cagtatgtttcagacatcctaaattacattagtcatggggaccctcaggtcaggggggcc
acatctattctatgtggtactatcgtcttctccatcctcaacaagtcccgatatgatgct
gagcgctggctggccattgttaaaagctgttctgggaatagtttttcattggaagattgc
attcccttgttgcaaaaatgtctgaaagatgaatcttctgtgacctgcaagctgacttgt
gtggcagtcaggcattgcatatccagtctattgtgtagcacgtacagtgaacacgggcta
cagctgatgatcgatctgctcactttgaagaacagctcttactggcttgtcagaacagaa
ctgctggagactctggcagagatcgattttaggttggtcaatttcttagaagggaaagca
gatggacttcatagaggtgtacatcattatactgggaggctacatattcaggatcgagtg
ctgaatggtgtgattatcagccttttgggagatgaagacgctcgggtgaggcatgtagcc
acagcaactttagccaaaatagttccaaggctgttttttcattgtgatcaagggcaagct
gaccctgtagtggcagcagccagagaccaaagcagtgtctacctgaaattgctcatgcac
gagacccagccagcatcccattttgctgtcagtacaatcacaaggatctacagagggtat
agcattatgcagagccccacagatgtcactatggagaataatctgtccaaagtcatcact
gcagtttctcacgcactgacaacatcaaccactcgagcattgacgtttggttgctgtgaa
gctttgtgcctgttatcctctgtttatccagtaagcacatggagtgttgggtggcattgt
ggtatttcccagcagagcccctccgaagaaccacgcaagagctgcactgccggtatggcc
aatatgatactgtctctgttgtcctcagcctggtttccacttgatctctccgctcaccag
gatgccttgatactggctggaaatttgatggcagctactgctactaaatctttaaagaac
ccctggacaggggaggatgaagccaacccgaccgctaccaagcaagaggagccatggcca
gctctaggtgaccgcttgatggttggcgtggtggatcagctgttcattcatttactgaag
gccatcaatatatgtgctcatgtgattgatgatgtccctccagggcctgtagtgaagact
actcttccatctttaactaaccccccttctttaagtcccatccggaggaaagggaaggag
agggagagtgctgagcagacctcagtgccgctgagcccaaagaaagtcagcgacaccact
ccagcttcacgccagacagatgcctctggcccagctcaaacaagcaaatctctcggcagt
ttctaccatctcccatcctatttaaagttgtatgatgttttgaaagccacctatgccaac
tataaggtaacactggatcttcagagtaacaatgaaaagtttgggggttttcttcgctct
gctctggatgtcctctctcagattttggaactagctaccctgactgatatcggcaagtgt
gtggaagaaatcctgggttatctgaagtcctgctttaacagggagccggtgatggtcacg
atatgtgtgcaacagctattgaaaaccctttttggaaccaatttggcatctcagtttgag
gcgctgtgttcaaaccctagtaaaacccagggaaaagctcagcgccttggctcttctaac
ctgcgacccggcttgtaccattactgcttcatggctccgtatacacattttacccaggct
ctggcagatgccagtctacgtaacatggttcaagctgatcaggagtatgacccatcaggg
tggtttgatgtgcttcagaaggtttcctctcagttgaagaacagcattaccaacgttact
aagcaccgtgcagataagaacactattcataaccacattcgtctatttgagcctctggtg
attaaagctttgaagcagtacaccacgactacatctgtgcagctgcagagacaggtcctc
gatcttctagctcaacttgtccaacttcgagtcaactactgtctgctggactctgatcag
gtgttcattggctttgtgctgaagcagtttgagtacattgaagtaggccagttcagggaa
tcggaagccatcattcccaatgtcttctttttcctggttcttctgtcctatgaacggtac
cactctaagcagatcatcggcattcctaaaatcattcagctgtgtgacggcatcatggcc
agcgggaggaaagctgttacccatgccattccagctctgcagcccatagtccatgacctc
tttgtattaagaggaaccaataaagccgatgcagggaaagagctggagactcagaaggaa
gtggtggtgtccatgctgcttagacttatccagtatcatcaggtcctagagatgtttatt
ctggtactgcagcagtgtcacaaagagaatgaggacaagtggaagaggctctcccgccag
atagcggacatcattctgcctatgttgtcaaaacaacagatgcacatagactcccatgat
gctctgggtgtgttgaacactctatttgaaactctggctccttcctccctacgtccagta
gacatgctgctgagaagtatgttcgtcgttccatacactatggcctctgtgagcaccgtc
cagctttggatatctggaatattggccatcctcagagttctcatctcacagtctacagag
gacattgttctctcccggatccaggagctgtccttctccccccttctcatctcatgtcag
aatattgccaaattgcgggatggagacaataaccatcaaaacactgagaacggtgctgag
cagaaccagacaaaggccccaccagaggagacattctctcggttcctgttacagctggtg
gggattctcttggaggacatagtaaacaaggagctaaaggtggacctgactgaacagcag
catactttctactgccagcagctgggcaccctgctcatgtgccttgtccacatcttcaaa
tcaggaacattccgaaggataacaaatgcagcttcaagactgttcaagggggatggagac
aatgggaactactactacacgttggagagcctcagtgaccttgtggaatccatgtttcca
acccacccttctctagtgctgctgtggtgccagtttttgctgctcatagactacaccaac
tacaactggtggtcagaagtacatcaaacgctcaagaggaacagcctgtctagtaccaaa
ctgctgctaagtccccagatgtcaactgatagcgatgagcctcacccggagtccaaactt
ggcatgtgtaaccgggagattgtgcggagaggagccctcattctattctgtgactatgtg
tgtcagaacctgcatgattcagagcatcttacctggctgatagttaatcacgttcaggat
ctcatctacctgtcacatgaaccgccggtgcaagattttattagtgcaatacacagaaac
tcagctgccagtggtctcttcatccaggccatacattcccgctgtgagaatctagcaacg
ccgacttctctgaagaagacattgcagtgcttggaaggcattcacctgagtcagtccggt
gcagtgttgatgttatatatagacaagctgctgtgtaccccattccgtgtgctggctcgc
atggtggatacactggcctgtcgtcgggtggaaatgctatattttgtatcattacagaat
agcatgtctcagttacctctagaagagttggataggatacaagagtatctgcagagcagt
ggcttagcacaaaggcaccaaagacttttctctctgctggacagataccgggtgaccgtg
gattcagacacagttagccccttacctttaatgacctctcacccgctggacggggacagt
cacccacgactggaaacattggaccccgatgaggagtggtatgtgtccctggtacgttcc
cagtgttatacacactctgattctgcgctgctggaaggggcagaactggtaaaccgaata
cctcaggctgatcgtctcgccttcatgaccaataaggagtttaacatgagcatgctagcc
ccgtgtttgtccctgggagtgaaccagatgataggcgatcaggacagcagcttctttgaa
acagcccagtctgtcctgctggatctcatctcgcagaccgttcagcagctgccagacact
catcagatctttcagcctctgaagccaatggagaaagactcctactgggagaagataatc
acagtattgggtgactctgaagtatattattcccttgtcaccctgtgtcgtgcgctggcg
cagtacctgctgtctctccccaaaatacctcagtcttttcacatacggcaggaaaatgaa
gtggacatggtgaagtttgtggtcatgtcggtggaggcattgtcctggcattttgtacaa
gaactgataccgttgggagtggatctccaagctgtgctggagtgttgttgtctgactcta
caacagccaggattgtggaatttgctggcttctgcagagtatgtgacccacggctgctcc
cttatcacctgcatccgctttattatagaggctgttgctgttcaacctggagagcaactt
ctgagcccagagaggaagaaaaacgcctcgcctgaagaccaagcaggagaggaggggcat
tctggagtgcgaggtacacagggagcattatttcttaagaccgcctgcaccatgatgtca
gagatggtggactccctgcagacagttttgttgtttggacacaagaagagctgccatatt
gccgcatttctcactccggtgttacagaacatagttgtaagcctggctagattgcctgca
gtcaacagctacaacagagtcccaccgctggtatggaaattgggatggtctcccaaaacc
ggaggagaatttggaacctcacttcctgagatccctgttgagtttctacaagagaaagaa
gtattcaaagaatttatctaccgcatcaatacattaggatggacaagtcgcacccagttt
gaggagacttgggccacactgcttggagttctggtgactcagcctattgtaatggaccaa
gaagaaagtcagcaagaggaagacacagagcgaacgcaaataaatgtcctcgctgtacaa
gccatcacttctctggtcctcagtgctatgactattccttctgccggcaacccagccatc
agctgcctggaacagcagccacggaacaagaccctaaaagccctggacaccaggtttggc
aggaagctgagtgttgttcgagggatagtggaggaagaaatccaggcgttggtatctaga
agagacaacattgccacccatcatgcctatcaagcttgggctccagtgccttgcttatct
gctgcaaccacaggagcactgatcagtcatgagaagctgctactgcagatcaacacagag
cgagaaattggaaacatgagctataagcttggccaggtctccatccactcggtttggctt
gggaacaacattactccgctgagaccagaggagctagatgaagatgaagaggatgagact
gatgctccagctccatcatcacctccattgtctccaattaactccaggaaacatcgggct
ggagtggacatacattcctgttcacagtttctcctagagctgtacagccagtggattctc
cccgctaacactgggaagaagactccagtcatcttggtcagtgaggttgtgagatcgctt
ctggcggtgtctgatttattcacggagaggaaccagtttgagatgatgtacacggcacta
accgagctccagaaacagcacccatccgaggatgaaattcttattcagtatctagtgcct
gcaatctgtaaggcagctgccgtgctgggaatggataaagcagttgcagagcctgtcagc
cggctcttggagagcaccctgcgtagtactcacatgcccagccgcattggcgctctgcac
ggcatcctctatgtgctggagtgtgatcttctggatgacacagctaagcagctcataccc
atcatcagtgactacctgctgtccaacctgaggggcattgcacactgtgtaaacctgcac
aaccagcagcacattctggtaatgtgtgcgactgccttttatttgattgaaaactatccg
ttggatgtggggccagactttactgcgggcatcatacagatgtgtggagtgatggtgtca
gggagtgaggaatccacaccctccatgatataccactgtgtcctgagaggtctagagcgc
ctcctgctgtccgagcagctctccaggctggacggggaggccctggtgaagctgagtgtg
gacagggtgaatatgcacagcccacacagggctatgactgcgctaggattgatgctgaca
tgcatgtacacaggtaaagagaagatcagccctggtcgtaccacagatccaagtcctgct
gccccggacagcgagtctgtcattgtcgccatggagcgggtatctgtgctttttgacaga
atccggaaaggattccccttcgaggcaagggtggtggccaggatccttccacagtttttg
gatgactttttccctcctcaagatgtaatgaacaaggttattggggagtttttatccaat
cagcaaccctacccacagttcatggcagctgtcgtttacaaggtgttccagactctacat
gccactggccagtcctccatggtgcgtgactgggtgatgctctctctctctaactttaca
cagagaactccggtggccatggcaatgtggagcctctcctgcttttttgtcagtgcatct
accagcaagtggatttctgcaattcttccgcatgtgatcagcagaatgggcaagtctgaa
cctgtggacgtcaacctgttctgtttagtggccatagacttttacaggcaccagatcgat
gaagagctggaccgcagggccttccagtcagtgttcgagctggtggctgccccgggaagc
ccctatcacagcctgctgatgtgtttgcagaatgtgcacaagacgacggtgttctaa
DBGET
integrated database retrieval system
