Nanorana parkeri (Xizang Plateau frog): 108785898
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Entry
108785898 CDS
T04897
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013
Nucleocytoplasmic transport
npr03015
mRNA surveillance pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108785898 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
108785898 (NCBP1)
03015 mRNA surveillance pathway
108785898 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108785898 (NCBP1)
03041 Spliceosome [BR:
npr03041
]
108785898 (NCBP1)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108785898 (NCBP1)
Spliceosome [BR:
npr03041
]
Common components
Common spliceosomal components
Cap binding complex
108785898 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
TFIID-18kDa
DUF1690
Importin_rep_6
Cob_adeno_trans
LUC7
Nuf2_DHR10-like
DUF1664
PRP1_N
Motif
Other DBs
NCBI-GeneID:
108785898
NCBI-ProteinID:
XP_018410578
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSRRRHSDESDGGQPHKRRRASEPLEIEDRLESLICRVGEKSSSSLESNLEGLAGVLEAD
LPNYKSIILKILCAVARTCPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETIKSNL
YTEATYLVRFLSDLVNCHVIAAPSMVAMFENFVGVTQEEDIPRVRSDWYVFALLSSLPWV
GKELYEKKDVEMDRIFSQIESYLKQRQKLHVSILQIWAADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSTLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDAPEG
PVMPGSHSVERFVIEDNLHCIIKSHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFAELF
QLPMPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYTRLDTMNSICVDRFINWFSHH
LSNFQFRWNWEDWSDCLSQDLDRPKPQFVREVLEKSMRLSYYQRILDIVPSSFSALYPAE
PKCVNKYEDESSSALPGYAIAVVLTNSIKNKAMSDDILNILKDLPNPNQDDDDDEGISYN
PLKIEVFMQCLLNLACKSFSHSFSALAKFHDVLKALTDSEEGKLHVLRVAYDVWKNHPQM
TAVLVDKLIRTQIVDCAAVANWIFSPELSQEFTRLYIWETLHSTIRKMNKHVQRIQKELE
DTKQRLAKQHKRRDNDDDSGREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILT
EHLVRCETGGIDVITPWYKICIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILTVF
QQFCALQA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcggaggcacagcgatgagagtgatggagggcaacctcacaaaaggagaaga
gcatctgaaccgcttgaaatagaagaccgtttggagtccttgatatgtagagttggagag
aagagctcctcatcactggagagtaacttggagggccttgctggggtcttggaagctgat
ctaccgaactataaaagcatcatcctaaaaatcctctgtgcagttgcacgtacttgtcca
gagaaaatgactgtttacactacgttagtgggactgctgaatgctagaaactacaacttc
ggtggggagttcgtagaagccatgattcgtcaactcaaagaaactatcaaatctaatttg
tacacagaagctacataccttgtacgctttctgtctgatcttgtgaattgccacgttatt
gcagcaccttctatggtcgcaatgtttgagaactttgttggggtcactcaggaagaagat
atacctcgggtgcgatctgactggtatgtgtttgctctcctctcctccttaccttgggtt
ggaaaagaactttatgagaagaaggatgttgagatggatcgtattttttcacaaatcgaa
agttacctcaagcaacgtcaaaaacttcatgtgtctattttacaaatatgggcagcggat
aaacctcacccacaggaagagtacttggattgcctgtgggcacagattcaaaagctgaaa
aaggatcgctggcaagagaggcacatcctgcgtccttaccttgcatttgacagcacactg
tgtgaagccctgcagcataacctcccacccttcacacccccgcctcacactgaggattca
gtgtatccaatgccaagggtcattttcaggatgtttgattatactgatgcccctgagggt
ccagtgatgcctggatctcattctgttgagcgatttgttatagaagataacctgcactgt
attattaagtcacactggaaagagaggaaaacttgtgcagcacagctacttagctaccct
ggcaagaataaaattcccttaaattatcatattgttgaggtcatttttgcagagttgttt
cagcttcctatgcctccacatattgacgttatgtatacaacactgttaattgaactttgc
aagctgcagcctgggtctttaccacaagtgcttgctcaagccaccgaaatgctatacact
cgattggacacgatgaactctatttgtgtggacaggttcataaattggttttctcaccac
ctaagtaattttcagttccgatggaattgggaagattggtctgactgtctttctcaagat
ctagatagacctaagcctcagtttgttcgtgaagttttagagaaatccatgaggctttct
tactatcagcggatattggacatcgtgccgtcatccttttctgccttgtacccagcagag
cccaagtgtgttaacaaatatgaggatgagagcagcagtgctctacctggatatgcaatt
gctgtggttttgacaaattctataaaaaataaggctatgagtgatgatattttaaatatt
ttaaaagatttaccaaatcctaatcaagatgatgatgatgatgaaggaatcagctacaat
ccactcaaaatagaggtttttatgcagtgcctgctcaacttggcctgtaaatcattcagt
cattcatttagtgcacttgcaaaatttcatgacgtattgaaagcactgactgacagtgaa
gaaggaaagcttcatgttctgagagttgcttatgatgtctggaaaaaccatccccagatg
actgcagtacttgtagataagcttatacggacccagattgttgactgtgctgctgtggcc
aattggattttctcacccgagttatctcaggagttcacaagactgtacatttgggaaact
ttgcattctacaattaggaaaatgaataaacatgttcagagaatacagaaggagttggaa
gatacaaagcaaagactggccaagcagcacaaacgtagagacaatgatgacgacagtgga
agggaggatgggcctctggaggaacaaatagagcgcctacaagagaaagtggagtctgct
caaagcgagcagaaaaatcttttccttgtcattttccagcgctttatcatgattctgacg
gagcacttagtacgctgtgaaactggaggtattgatgtgatcactccatggtacaagatc
tgtatagaaaggcttcagcaaatcttcttacagcatcatcagataatccagcagtacatg
gtgaccctggaaaacttgttgttcacagcagaattggatcatcacatcctgacagtcttc
cagcagttctgtgcactacaagcttga
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