KEGG   Nanorana parkeri (Xizang Plateau frog): 108786262
Entry
108786262         CDS       T04897                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108786262 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npr03041]
    108786262 (SF3A1)
Spliceosome [BR:npr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108786262 (SF3A1)
 Complex B
    108786262 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    108786262 (SF3A1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 108786262
NCBI-ProteinID: XP_018411014
LinkDB
Position
Unknown
AA seq 786 aa
MPAGPVQLLAPQAPEGGQQQMEEEKKEEVVYTKPIVGIIYPPPEVRNIVDKTASFVARNG
PEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAIPKVMQQQQSVQ
QLPQKVQAQVVQESIVPKEPPPEFEFVADPPSISAFDLDVVKLTAQFVARNGRQFLTQLM
QKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLPKLKKEAENPTEVLDQVRYR
VEWAKFQERERKKEEEEKERERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGA
RILIQERYEKFGESEDVEMEVESDEEEEVKDGKGDEGTSQMDQDTQVQDMDEGSDDEDYA
QKAPLPPESPMQPPLPPTPDQVIVRKDYDPKASKPQPPAPASDEYLVSPITGEKIPASKM
QEHMRIGLLDPRWLEQRDRSIREKQGDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIG
KKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEEDGKDKI
GPSKPNEVTQPPPPSSAPTMTSPAPPINSAPRPPPPRVNTTMVSALPVMQRPPMGSVVRL
PHGSVLTAPMPPILHAPRINVVPMPPNPSSMMAQRGPHMIVPAAFVSAPPVAPVPTQAPM
PPAHPPPPLDDEPSAKKMKSEDSLIPEEEFLRRHKGPVTVKVQVPNMQDKTEWKLNGQIL
AFTLPLPDQVSVIKVKIHEATGMPAGKQKLQYDGIFIKDSNSLAYYNMQNGATIHLALKE
RGGRKK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgccggcgggtccagtgcagctgttggctcctcaggcgcccgagggagggcagcagcaa
atggaggaggaaaaaaaagaagaggtggtttacactaagcctattgtgggtatcatctat
cctccaccagaggtccgaaatattgtggacaagactgcaagctttgtggcaagaaatggc
ccagagtttgaagccagaatccgtcaaaatgaaatcaacaatcctaagtttaatttcttg
aacccaaatgatccttatcatgcttactaccgtcacaaggtcaatgagttcaaagaggga
aaagcgcaggagccatctgctgccatacctaaagttatgcagcaacagcagtctgtacag
cagcttccacagaaggttcaagctcaggttgtccaagaaagcatagttccaaaggaaccc
cctccagagtttgagtttgtagctgatccaccgtctatctctgcctttgacctggatgtg
gtgaaactgacagcccagtttgtggctcgtaacgggcgccagtttttgacccaactgatg
cagaaggaacagagaaattaccagtttgacttccttcggccccagcacagtcttttcaac
tacttcaccaagcttgtggaacaatatactaagattttgattcctccaaagggattactc
cccaagctgaagaaagaagctgagaaccccacggaggttttagaccaggtgcgttatcgt
gtggagtgggctaaatttcaggaaagggagaggaaaaaagaggaagaggagaaagagcga
gaacgtgtggcctatgcacaaattgattggcatgactttgtggtagtggaaacagttgac
ttccagcctaatgaacaaggcaactttccacctccaacaacaccagaggagctgggtgcc
cgtatattgatccaagagcgatacgagaaatttggtgaaagtgaagacgtggaaatggaa
gttgagtctgatgaggaagaagaagtaaaggatggcaagggtgacgaaggcacatctcaa
atggatcaggatactcaagtgcaggatatggatgagggttcagatgatgaagattatgca
cagaaggctcctcttccccctgagtcaccaatgcaaccacctttacctcccacaccagat
caagtaatagttcgaaaagattatgatccaaaagcctctaaaccgcagccaccagctcct
gcgtcggatgaataccttgtatctcctatcactggggagaagattcctgccagcaagatg
caggagcatatgcgtattggactcttggatccccgctggttggaacagagagatcgctcc
attcgagagaagcaaggggatgatgaagtttacgctccaggcttggatatcgaaagcagc
ttgaagcagttggctgaacgccgtaccgatattttcggtgttgaggaaaccgctattggt
aaaaagattggagaggaagagatccagaaaccagaggagaaggttacatgggatggacac
tctggcagcatggcacgtacccaacaagctgcacaggccaatattacactacaggagcaa
attgaggccatccataaggctaagggtttggttcctgaagaggatggcaaggacaagata
ggacctagcaagcccaatgaagtcacacagccgcctcctccatcctctgcacctaccatg
accagccctgctccgcccatcaactctgctccaagaccacctcctccacgtgttaatact
actatggtgtccgctttacctgtgatgcagagacctcccatgggctctgtggtgcgcctt
cctcacggctctgttttaactgctccgatgcctcctattctgcacgcaccaaggataaat
gtggtaccaatgccaccaaacccatcctcaatgatggcacagagaggaccacacatgatt
gttccagcagcatttgtctctgctcctcctgttgcacctgttcctacacaagctccaatg
cccccagctcatccaccaccaccattggacgatgaaccatctgccaagaaaatgaaaagt
gaggactctcttattccagaggaagagttcttgcgcaggcacaagggtccagtcactgtt
aaagtacaagtgcccaatatgcaggacaagacagaatggaagctgaacggccagattctg
gcattcacccttccacttcctgatcaggtctctgtaataaaggttaagattcacgaggca
actggaatgccggctgggaagcagaagcttcagtatgatggaatctttattaaagattca
aactctctcgcttactacaacatgcagaatggagctacaatccacttggctctgaaggag
agaggaggtcgtaaaaaataa

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