KEGG   Nanorana parkeri (Xizang Plateau frog): 108786296
Entry
108786296         CDS       T04897                                 
Symbol
RFWD2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04115  p53 signaling pathway
npr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108786296 (RFWD2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    108786296 (RFWD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npr04121]
    108786296 (RFWD2)
Enzymes [BR:npr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108786296 (RFWD2)
Ubiquitin system [BR:npr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108786296 (RFWD2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108786296 (RFWD2)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 zf-C3HC4_2 Beta-prop_EIPR1 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 zf-RING_2 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 WD40_RFWD3 RING_XB3-XBAT31 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 108786296
NCBI-ProteinID: XP_018411058
LinkDB
Position
Unknown
AA seq 683 aa
MSSGRQPQQLPGPGGGTGPSSPSPSPSSSSSSVPLRQGLVGVTSLSRLGVPGGSSALAGR
SGGSGPRKRPLPTPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSL
EDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFDDKRLKLDPSNGHRWQIFQDLLAT
DQDNLDLANVNLMLQLLVQKKRQLEAESHAAQVQILTEFLKVARRNKREQLEQIQKELSV
VEEDIKRVEEMSGLYSPRSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGNSQTKKQPW
YNSTLASRRKRLTAHFEDLEQCYFSTRMARVSDDSRTVSQLDEFQECLSKFTRYNSVRPL
ATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMT
CNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKL
LASGSDDAKVKLWSTNLDNSVACIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNT
KQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVSRPHCLRSFKGHINEKNFVGL
ASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRAL
PDGESNVLIAANSQGTIKVLELV
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtcctcgggtcggcagcctcagcagctccccgggccgggaggtggaacgggcccttcc
tccccctccccttccccatcaagttcttcttcatctgtgccgctgcgccagggacttgtg
ggggtcaccagcctgtccaggctcggcgttccaggcggcagctcagcgctcgcaggaagg
tccggcggctccgggccgaggaagaggcctctgcctaccccactgtgcaacgggctcatt
aactcctatgaggacaagagcaacgacttcgtgtgtccgatttgtttcgatatgatcgag
gaagcctacatgacgaagtgtggacacagcttctgctacaaatgtatccatcaaagtctg
gaggacaataaccgctgcccaaagtgtaactatgtggttgataacattgaccacctttac
cccaactttttagtaaatgaactaattctgaaacaaaagcagaggtttgatgacaagcgc
ctaaagttggacccatcgaatggtcatcggtggcagatcttccaggatctgttagcaact
gatcaggataacctggatcttgccaatgtgaatctgatgcttcaacttctggtacagaag
aagaggcagcttgaagctgaatcacatgctgctcaagtccagatcctcacagaattcctg
aaagttgcccggcggaataaaagagagcaactggagcagatccagaaagaactgagtgtg
gtggaggaagacataaagcgtgtggaggagatgagtggtttatactctccacgcagtgaa
gacagcactgttccccaatttgaggccccatccccatcacacagtagcataattgactcg
acagaatacagccaaccacctggcttcagtgggaactctcagacaaagaagcagccttgg
tacaacagcacgttggcatcgcggcggaaacgtctcaccgcccattttgaagatttggag
cagtgctatttttctaccaggatggcccgtgtatcagatgatagccggacggtgagccag
ctggatgagtttcaggagtgcctatccaaattcaccagatataattctgtgcgccctctt
gccacactgtcttatgccagcgacctgtataatggctccagcattgtgtccagcatagag
tttgaccgagactgtgattactttgccatcgctggggtgactaagaagattaaagtgtac
gagtatggtacagttatccaggacgctgtagacattcattatccagagaatgaaatgacc
tgtaattctaaaatcagctgtataagttggagcagttaccacaaaaacctcctggccagc
agcgattatgaagggaccgtgattctgtgggatggctttacagggcagagatcaaaagtt
taccaggaacatgaaaaaaggtgttggagtgtggactttaacctcatggaccccaaactt
ttggcgtccggctcagatgatgccaaagttaagctgtggtctaccaacttggataattct
gttgcttgtattgaagccaaagccaatgtatgctgtgtcaaatttagtccctcttctcgc
tatcacctggcatttggctgtgcagatcactgtgtacattactacgacctccgcaacact
aagcagccgatcatggtttttaaagggcatcgcaaagctgtctcttacgccaagtttgtg
aatggtgaagaaattgtctctgcgtcaacagacagccagctgaagctgtggaacgtctcc
agaccacattgcctgcgctccttcaaaggtcatatcaatgaaaagaattttgtgggttta
gcatcgaacggagattatattgcctgtggaagtgaaaacaattccctctacctgtattat
aagggtctctcaaagaccctgctgactttcaagtttgacaccgtaaagagtgtgttggac
aaagaccgcaaagaagacgacaccaatgagtttgttagtgctgtatgttggagagctctt
cctgatggggagtcaaatgttcttattgctgctaacagccagggcacaatcaaggtactg
gagctggtatga

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