Nanorana parkeri (Xizang Plateau frog): 108786298
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Entry
108786298 CDS
T04897
Name
(RefSeq) tenascin-R-like
KO
K06252
tenascin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510
Focal adhesion
npr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108786298
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108786298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108786298
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108786298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_2
EGF_Tenascin
FN3_Tor_3rd
DUF4998
fn3_2
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
108786298
NCBI-ProteinID:
XP_018411059
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MGSEGASNALGPLQVGVHLIVLLCIFRHSKCNAEVNTGQSPGMHIPTRGEGNQTDPGPGS
KHQPLVFNHIYNFNVPLGFPCTLEPESPEEASWVSQQSDNTADAESQITFTHSIRVPQRL
CQCYTAPHAVQHLLSRIEALEREVMLLRERCNERGCQDVEATGLTEFAPPCSGHGNFSLD
SCVCSQGWGGENCSEPLCPLGCSGRGTCIEGICVCEPDYTGEWCTDLLCPEECSPHGHCQ
DGQCLCQEPYTGVSCNELRCPGDCLGKGRCANGTCVCQDGYVGEDCGRMWCVNACSGRGQ
CQNGVCECEEGYSGQDCSEVAPPVDFTVTAVGDHWMDLTWQGTSAVTEYVISYQPAVPVE
WGTQQRLQQRVPGDWSAVTIRELEPGTTYNISVCSVISDITSEPASITMSTHISPPKGLQ
FKNVTQTSVEVQWEPPLFSIDGWEISFTPKNNEGGLTVQLPSIVTSYNQTGLKPGEEYTI
SIISLKEPARSPPTSGSVSTAIDGPSNILVRDVSDTVAFVEWTPARARLDFIQLQYGPIN
GEGEKTTFRLQPPLSQYSMQVLRPGSQYEVSVCGIRGDTRSDPVTTTFTTELDAPKNLRV
MGRASTTLELEWDNSEAEGDGYRVVFSTLAGDQYHELRIPRHPGQTTKATLTDLIPGTEY
GIGISAIRDNLYSAPATMNARTELDSPSDLMVNGSTDKTISLVWTKAQGPIDHYRISFTP
SSGMASEITVPPEITQYDLTDLEAGTEYTITIIAERGRQQSRETTVDAFTGFRPITQLYF
SGITAYSVNVSWTDPSPPADRFILSYTPIGGDEPIELSLEASVRQTRLIDLLPSTEYLVT
LLPIHGTLRAELVEGTVTTGVAPPMDVSVINVTEDRMTVIWRPPPSSLHHYRLSYQSTKG
RMDSVVIANDQTQYSLTNLQPTTEYRISLSCVWGREESERVTITAQTALDPPLGLRASNI
SDSGAVLLWEPPRADIESYIITLTHHTVSGETILIDGDSQEFQLQNLLPHTHYSVSLSAS
SGPQASRSSGVSFTTFLDPPINLTASAVSRTSALVSWQPPVSATENYILTYKSTNGSRKE
LIVDAEDTWIRLEGLLESTEYNVTLLSVLDGERSAVTHTVFTTGGRVFAYPQDCAQHLMN
GDTQSGVYTISINGDQSLSLPVFCDMTTDGGGWIVFQRRHNGLTDFFRKWSDYRVGFGNL
EDEFWLGLDTLHQLTSQGRCELRIDMRDGQEAVYAYYNKFYVGDPRSMYKLRIGDYNGTA
GDSLTYHQGRPFSTKDRDNDVAVTNCASSYKGAWWYKNCHRTNLNGKYGETRHSQGINWY
HWKGHEFSIPFVEMKMRPYSHRTMKKRSLQL
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgagggagcgagcaatgctttgggtcctttgcaagttggtgtgcacctcatt
gtgctgctttgtatattcagacactcaaagtgcaatgctgaagtgaatactggccagtcc
ccggggatgcacattccgaccagaggagaagggaaccagacagatccaggacctggtagc
aagcatcaacctttggtttttaatcacatctacaattttaatgtccctctgggatttccc
tgcacattggaacctgaatctccagaagaagcaagctgggtatcccaacaatcagataac
acagcagatgctgagagtcagataacctttacacacagtatccgagttccacagaggttg
tgtcagtgctacacagcccctcatgctgtgcagcatctccttagcagaattgaggctctg
gaaagggaggtgatgctgctccgagagcgctgtaatgagaggggatgccaggacgtagaa
gctacaggtctcacggaatttgcacctccttgcagtggtcatggtaacttcagtctggac
tcctgcgtgtgcagccaaggctggggaggagagaactgttcagagcctctgtgcccacta
ggctgctctgggaggggcacctgtatagagggcatctgtgtatgtgagccagactacacc
ggcgagtggtgcacagacctgctgtgtccagaggagtgcagccctcatgggcactgtcaa
gatggacaatgcttgtgccaagagccatacacgggtgtcagctgcaatgaactccgctgc
ccaggtgactgcttgggaaaaggacgttgtgccaatgggacctgcgtatgccaagatggt
tatgtcggagaggattgcgggcgcatgtggtgtgtgaatgcctgcagtggcagagggcag
tgccagaatggtgtctgtgagtgcgaggaggggtacagtgggcaggactgttctgaagtt
gccccgcctgtggatttcacagtgactgctgttggagatcactggatggacctgacatgg
caaggaacgtctgctgtgacagagtatgtcatttcataccagcctgcagtgccagtagag
tggggaactcagcagcggttacagcaaagggtccctggagattggagtgctgtcaccatc
agagaactggagcctggaacaacctacaatatcagtgtctgctctgtcatcagtgacatc
accagcgaacctgccagcatcactatgtccactcatatttctccacccaaaggactgcag
tttaaaaatgtgactcagacctcggtggaggtgcagtgggagccccctttgttctctatt
gatggctgggaaattagttttaccccaaagaataacgaaggtgggctgactgttcagctc
cccagcattgtcacatcctataatcagacaggactaaagcccggagaggagtacaccatc
agcataatttcactgaaagagcctgccaggagtcccccaacttccggaagcgtatcaact
gccattgatggtccctccaacatcttagtcagagatgtatctgacacagtagcctttgtt
gaatggacccctgcaagagccagactggacttcattcagctacagtatgggccaatcaat
ggggaaggggagaagactactttccgtctacaaccccccctgagtcagtactccatgcaa
gtcctgcggcctggctcacagtatgaggtgtcagtatgtggtatccgtggagacacacgc
agcgatcctgtcactacaactttcactacagaacttgatgcccccaaaaatctgcgtgtg
atgggaagagcctcaacaaccctggaactggaatgggataacagcgaagccgagggagat
gggtaccgcgttgtctttagcacccttgcaggtgatcagtaccatgaactcagaatacca
cgtcatcctggccagacaacaaaagccacacttacggatttgatcccaggaacagaatat
ggaataggaatatctgctattcgagataatctctacagcgccccagcaacaatgaacgca
cgtactgagttggacagcccaagtgatctgatggttaatggatctacagacaagaccatc
tccttagtctggaccaaagctcagggccctattgaccactaccgcatctcttttacacca
tcttctggtatggcctctgaaatcacagtcccccctgaaatcacccagtatgatctcacc
gacctggaagcaggaacagaatataccattaccataatcgcagagagggggagacagcag
agccgggagaccactgtagatgcttttacaggcttccggcccatcacacagctttatttt
tctggtataacagcatacagtgtgaacgtctcatggactgacccctctcctccagctgac
cgcttcatcctgagttatactcccatcgggggtgatgagccaatagaactatcacttgaa
gcctcagtaaggcaaacacgtctcattgacctgttacccagcacagagtatctggtcacc
ctcctgcccatccacgggacactaagagcagagctggtggagggaacagtaactacagga
gtggcaccacccatggatgtgtctgtgataaatgtaacagaagacagaatgacagtgatt
tggagaccacctccttcctcactccaccattatcgactgtcttaccaatctactaaaggg
aggatggatagtgtggtgattgctaatgatcagactcaatattcactcaccaatctacag
ccaaccactgaatacagaataagcctaagctgcgtgtggggccgtgaggaaagcgagaga
gtcaccatcactgcacagacagccttggatcctccgcttggcctgagggccagtaacatc
agtgactcgggagctgttttgctgtgggagccaccaagggcagacattgagagttatata
atcacactgacacaccacacagtttcaggagagacaattctcattgatggggacagccag
gagtttcagctgcagaaccttctccctcatacccattactcagtctccttgtcagccagc
agcgggcctcaagccagccggagctctggtgtcagctttaccacatttttggatcctccc
ataaacttgacagcctcagcggtatcaaggacaagtgctctggtgtcatggcagccgccg
gtttctgcaaccgaaaactatattctgacttacaaatctaccaatggcagcagaaaggaa
ttgattgtggatgcagaggacacatggatccgcctggagggtctgctggagagtaccgaa
tacaatgtcactttactatcagtactggatggagaacgaagtgctgtcactcacacagtc
ttcactacaggaggaagagtgtttgcctatccccaggactgcgctcaacatttaatgaat
ggagacactcaaagcggagtatacactatttctattaatggtgaccagagtctgagtttg
cctgtgttttgtgatatgaccaccgatggaggaggctggattgtattccagagacgtcat
aatgggttgacagatttctttcgtaagtggtctgactaccgagttggctttggaaacttg
gaagatgagttttggctgggtctggacacccttcaccagctgacgtctcagggccgctgt
gaactgagaattgacatgcgtgatggacaggaagctgtgtatgcctattataacaagttt
tatgtgggcgatccacgcagcatgtataaactgcgcattggtgactacaatggaaccgca
ggtgattcccttacttatcaccaagggcgtccattctccaccaaggacagagacaatgat
gtggctgtaacaaactgtgcatcgtcatataaaggcgcatggtggtataagaactgtcac
cggactaacctgaatggaaaatacggagagacaagacacagtcagggtataaactggtat
cactggaaaggacatgaattttctatcccttttgtggagatgaagatgagaccatacagc
catcgtaccatgaagaaacgctctctccaactctaa
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