Nanorana parkeri (Xizang Plateau frog): 108786405
Help
Entry
108786405 CDS
T04897
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108786405 (TNRC6C)
03036 Chromosome and associated proteins [BR:
npr03036
]
108786405 (TNRC6C)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108786405 (TNRC6C)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108786405 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
108786405
NCBI-ProteinID:
XP_018411196
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MEEKKKKKQEEKKKKESTQKKAAEQKNKVPDPVKISSNQPQTATPSTSSTVPNSNGKRAS
ANGQQAAASRYLPREVPPRFRQQEQKQLLKRGQPLPSGTLTSANTGQDTGASPPPQQGAG
GAHHPTKTHSDLGFSGLGDHYENSYWGPQPTIRGETSYSWDKVIINRTDKEAWPSITGTE
TESASECTTDTDSASNCGSEKSSMATTSAQGTFTGHTKKLNGNNGTNGALVQSTSNQSVL
GAGGANGNGNLSRVWGAPSGSSSGTAHCSSSSGDGKVDSMIGESRSQNCWGASNSNAGIN
LNPNANPAAWPVLGHEGTLNGGNPSNICGPVSAIGQNIGNQNGNAAGTLGAWRNLQSQES
TEPQTSTSQNVSFSIQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGSIIP
PHLQSLPGANGSVSQVSGVGDSTGSSLWGLSPGGPAPGNSSSGFSQETGDTCSTAVSAKQ
NGGQKDGTVMNAWESGPPTSPGVLAWGRGRSNGGNMHSGPWGQPSRGTSNGMNGEWGKSQ
NQHSSNDISGKGSTGWDSSSITIQNSPQQGSDQINSRAKSASSIDRSNDNAGNPNEGRGS
ENQHGEKGMADQGQMQLPRQDLDPRVISNTGWGQVPVKQNIAWEFDEFKRPEKKNIGTEA
WGGTNSQPSNSGGKSEGSIMNSTNTSSVSGWANSQPISASVNAGWVENKAPNGPGGWGDP
ASSTVVNAAAKSGHAWSGSANQEEKSPTWSESHKPKPQGWVDGQKSNTSWTSGGGDWTDM
PPVPAHITDGKKNGAGWDTDGKSATGWNDNSRPGTSGWGNGTSTKANSGTGWGEPLKSPQ
QNWANKPQDVSGWGGATSVKQTGSGWSGAPMPSPPPAKQKDINSEPSGWEEPSPPSVRRK
MEIDDGTSAWGDPNIHQSKTVNMWDRNSTIVQTIPSANSNATPITPSNTSLVEPQPPHQS
SAQQNRSPLLGPGWGDMPPVHSKAEIPWGEPPSPSASVDNGTSAWGKPSKSGSGWVDGAP
ESSGNYGRTNAPAAAPVLCKPAQKSMQEGWSSGGEEVGHSQWEDEENDMWNNAASQDSNS
SCNSWGNGPKKGLSKGMKTPSKSDEAWIMTRLTKQLTDMGFPKEPAEEALKSNNMNLDQA
MSALLEKKVEMDKRGLVMADYNAVVAKPLSCRPPPISKESSMDRPTYLDKDGGLVEEPTT
SPFLPSPSLKLPHPNSALPNQALGGMTPGLNMQNLNSSRQIQSGNLGMFGNSGAAQARSM
QQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTM
LNQLYQLQLAYQRLQLQQQMLQAQRNVSGPMRQQEQQVARTINNMQQQIQQHQRQLAQAL
LLKQQTPPPHPPLHPPAGKSALDSFSPHAPGPSLSDLHTKEQQSSSSNFSSYPMVSGLNP
AMNVSSMDMAGGLSVKDTSQSQSRLPQWTHPNSMDSLANSASLDPSPGKSTALPGGLGIG
PPSKSNIDDSYNRYDLLQNSESPTSPPVPVPDSWSRAKPENDKISNGSSINWPPEFHPGV
PWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGAKLSDIKSNWSSSPISHT
QASLSHELWKVPRNTTAPTRPPPGLTNAKHSSAWGSNQLGWTSSYSTGSTWSTDSSGRTS
SWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCV
LGNTTILAEFAGEEEVNRFLAQGQPMPPTSSWQSNTGNSQPRLGGNGGSHNLVRNDAAHW
NPPCLSAKGGNDLLWGGVPQYSSSLWGPPGSDDARIIRSPTPLNTLLPGDLLSGESM
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaagaagaaaagaagaagaaggaaagtactcagaaa
aaggctgctgaacaaaaaaacaaagtgccagatccagtcaagatcagttccaaccagccc
caaactgccacacccagtacttccagcactgtcccaaatagcaatggaaagcgtgcatct
gccaatggccagcaagcagcggcctcccgttatctgccacgtgaggtgcctccacgtttc
cgccagcaagaacagaagcaacttctgaagagaggacagccactgccttctgggacattg
accagtgctaataccggacaggatactggggcaagcccacctccacagcaaggggctggt
ggagctcaccacccaacaaagacacactctgatctcggttttagtggtctcggagaccat
tatgaaaattcctattggggaccgcagcctactatccgaggtgaaaccagttatagctgg
gataaagtgataataaacaggactgacaaggaagcgtggccttccattacaggaactgag
actgaatctgcctcagaatgtactacagacactgattccgcctccaactgtggctcagag
aaaagtagcatggctacaacgagtgcccaaggcaccttcactggacatacaaagaaattg
aatggcaataatggcaccaatggagcactcgtccaaagcacttctaaccagagtgtcctt
ggagctggtggagcaaatggaaatggaaacttatccagagtttggggtgcaccttcaggc
tccagctctggcactgctcactgctcctccagtagtggtgatggaaaggtggacagtatg
attggagagagtaggagtcagaactgctggggtgcttccaactcaaatgctggcattaat
cttaaccctaatgccaacccagctgcctggcctgtccttggacatgaaggaactttgaat
ggaggtaatccttccaacatctgtggtccagtcagtgccataggccagaatataggcaac
cagaatggaaatgctgcaggtaccttaggtgcttggagaaatttgcagtcacaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcatacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaattcttcaccaaaccccattaatgca
atgcagacaaatggactgcccaactggggaatggctgttggaatggggagcatcatccca
ccccacctgcaaagccttcctggtgctaatggttcagtttctcaagtcagtggggttggt
gacagcacgggcagttcattgtggggtttatcgcctggtggtcctgctcctggaaacagc
agttctgggttcagccaggaaactggagatacttgtagtacagctgtaagtgctaaacaa
aatggagggcaaaaagatggaactgtgatgaatgcatgggaatcaggaccacctaccagt
ccaggagtcttagcttggggtaggggtagaagcaatggtggaaatatgcattctggacct
tggggtcagccaagtcgtggcacaagcaacggcatgaatggtgaatggggaaagtctcaa
aaccagcattccagtaatgacatcagtggaaaagggtcaacagggtgggacagttctagt
attaccattcagaattctccacagcagggaagtgatcaaattaattctagggccaaatct
gcatcatctattgacagaagtaatgacaatgctggaaatccaaatgaaggacgagggagt
gaaaatcagcatggggagaagggaatggcagatcaggggcagatgcaattgccaagacaa
gaccttgatccaagggtcatctccaacacaggttggggacaggttccagttaaacaaaac
atagcatgggaatttgatgaatttaagaggcctgaaaaaaaaaatattgggacagaagct
tggggaggtacaaactctcagccttcaaactcaggggggaagagtgaagggtccatcatg
aacagtacaaatacctcttcagtatcgggatgggccaactcccaacctatatctgcttct
gttaatgcaggctgggtggaaaataaagcgccaaatggtccaggaggatggggagatcct
gcaagctctactgttgtcaatgctgctgccaaaagtggtcacgcttggagcgggtctgct
aatcaggaggagaaatctcctacatggagcgagtctcataaacccaaaccccaaggctgg
gtagatggtcagaaatcgaatacaagctggacatcgggtggtggagactggactgatatg
ccacctgttccagcacatattactgatggaaagaaaaatggagcagggtgggacactgat
ggaaagtctgcaacagggtggaatgataattcacggcctgggaccagtgggtggggcaat
ggcacaagcaccaaggctaattcgggtacaggttggggggaacctttgaaatctcctcag
caaaactgggccaacaaaccccaagatgtgagtggttggggaggagccacatctgtaaag
cagactggatcggggtggagtggagcaccaatgccatcgcctccgccagctaaacagaag
gacataaactctgagcccagtggttgggaagaaccttcaccaccgtccgttcgccgaaaa
atggaaatcgatgatggtacctcagcttggggagacccgaacatacaccagagcaaaact
gtaaacatgtgggataggaacagcactatagttcagactattccctcagctaacagcaac
gccaccccaatcactccctcaaataccagtttggttgaacctcagccacctcatcagtca
agtgcccagcagaatcgatccccactacttggtccaggctggggagatatgcctcctgtc
cactcaaaggctgaaatcccttggggggagcccccatctccgtctgcttcagttgacaat
ggaacttctgcgtggggcaagccctccaaaagtggttcgggatgggtggatggcgctcca
gaatcatctggaaattatggcaggacaaatgctccagctgctgcccctgtgctgtgcaaa
ccagctcaaaaatctatgcaagaaggctggagtagcggaggagaagaagttggccacagc
cagtgggaggatgaagaaaatgatatgtggaataatgctgcttcccaagatagtaattct
tcttgcaattcttggggcaatggccccaagaaaggactttccaagggcatgaagactcca
agcaagtctgatgaggcctggatcatgactcgactgactaaacagctcactgacatgggc
ttcccgaaagagcctgctgaagaggccttgaaaagtaacaatatgaatctggaccaggcc
atgagtgctctactggaaaagaaggtggaaatggacaagcgtggattggtaatggctgac
tacaatgccgttgtcgccaagcccttgagctgtcgcccaccaccaatctccaaagagtct
tccatggaccgccccacttacttagacaaggatggcggcctagtggaagagcccactact
tcaccatttttgccttcaccaagcctgaagctcccccatccaaacagtgcactccctaat
caagcccttggtggcatgacgccaggcctaaacatgcagaacttgaattcctctagacag
atacagagtggcaatctgggtatgtttggcaatagtggagcagcacaagccaggtccatg
caacagccacagcagccaccagtgcaacctctcaactcatcccagcctagtcttcgtgct
caagtgcctcagtttttatcccctcaggttcaagcacagcttttgcagtttgcagcaaaa
aacattggtctcaaccctgcactattaacctcgccaattaatcctcagcatatgaccatg
ttgaaccagctctatcagctgcagttggcgtatcagcgtttacaactccagcagcagatg
ttacaggctcagcgtaatgtttccggacccatgaggcaacaggagcagcaagttgcacgt
acaatcaataacatgcagcagcagatacagcaacatcagcgccagctggcccaggctcta
cttttgaagcaacagactccccctccacacccaccattgcatcctcctgcaggcaagtca
gcactggacagcttctcaccccatgccccaggtccaagcctgtctgacctgcacaccaaa
gaacagcagtcttcttcaagtaatttctcttcttacccaatggtttctggattaaatcct
gctatgaatgtaagcagcatggacatggctggaggtttgtcagtaaaggatacgtcccag
tctcagtctcgtctgccacaatggacccatcccaattccatggatagcctggcaaattct
gcttctcttgatcctagccctggcaagtcaactgctcttcctggaggtcttggcatcggc
cctccttcaaagtccaatatagatgactcctacaatcggtatgatcttctccaaaatagt
gaatcaccaacaagtcctcctgtccctgttccggacagctggtcacgtgccaaacctgag
aacgacaaaatctccaacgggtccagtatcaactggcctcctgaatttcacccaggagtg
ccttggaaaggactgcaaaacattgaccccgagaatgatcctgatgtgaccccaggaagt
gttcctactgggcccactattaacaccacaatccaggacgtcaaccgttatctgctcaaa
agtggagctaaactgtcggatataaagtccaattggtcatccagccctatctcccacact
caagcatctttgtctcatgagctgtggaaagtaccgagaaacactacagccccaaccaga
ccgccgcctgggctaaccaatgccaaacactcctctgcctggggctcaaaccaacttggc
tggaccagctcctactcaacaggttccacctggagcacagacagttcaggaagaacaagt
agctggctggtcctgcgtaacctcactccacagatcgatggctccaccttgagaacgctg
tgtcttcaacatggtccgctgataacattccatctgaacctcactcaaggcaatgcagtg
gtcagatacagctcaaaggaggaggccgccaaggcacagaagtctctacatatgtgtgtc
cttggcaacactactattttggcggaattcgcaggcgaagaagaagtgaaccgtttcttg
gcacaagggcaacctatgccccccacttccagttggcagtctaacactgggaatagtcag
ccccggctagggggcaacgggggctcacacaacttggttcgcaacgatgctgctcactgg
aatcctccttgtttgagtgccaagggaggcaacgatcttctgtggggtggagtcccgcag
tattccagcagcttgtggggcccacctgggtcagatgatgccaggataattcgcagtcca
acacctctcaatactctgttaccgggagatttgctgagtggggaatcaatgtga
DBGET
integrated database retrieval system
