Nanorana parkeri (Xizang Plateau frog): 108786617
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Entry
108786617 CDS
T04897
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npr03037
]
108786617 (NPHP3)
Cilium and associated proteins [BR:
npr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108786617 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_14
TPR_17
NPHP3_N
TPR_19
TPR_3
KAP_NTPase
NACHT
Uso1_p115_C
TPR_11
AAA_22
ARM_TT21_4th
AAA_19
AAA_16
Folate_rec
FtsK_SpoIIIE
T2SSE
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
108786617
NCBI-ProteinID:
XP_018411445
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MGTASSMVSPGEVIEDTYGGGGGEACEIPVEVKPKARLLRSSFRRGPWVIGASFKSTASV
DLEYAAEYERLKKEYEIFRVSKNNEIASMQKKEVKLDEENKRLRAELQALQKTYQKILRE
KENAVEAKYQAMERAATFENDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQRLQAQ
GIQVFDPGECDSDDNDTDVTVPGTQCDYWTSGALGSEPSMGSMMQLQQSFRGPEFAHSSI
DVEGPFANVNRDDWDAAVASLLQVTPLFSQAVWSNTVRCYLINTKDTQPEVDIFLKEYSS
KLQRMCENLGYFFQVVCFPEECGNHYTAVRKWEIEKSSLVVLFICSSLTSSLWEDCKEAF
LKNTEAKPRIVYHKLEGSASDLDCMQQLIEQDPNKSNKTKIIDHSGDPNEGVYKAYCQVE
KVIKQDLLAAEISDPDSKDDTAIQEDDDFGDVLWDVHDEQEQMEAFQHASHSTCELGFDK
YYDRLNDLVAAPAPIPPLLITGGPGSGKSLLLSKWIQLQQKHSPNTLMLYHFVGKPMSTS
SEPALVIKRLTLKLMQHSWSISSFSMDPGKFLEEFPHWLEKLSIRYQGNIIIIIDSIDQV
EHPEKHMQWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKDVKALLNLECSGA
GIVLTKEQERKLERHCRSATPCNPLYVTLLARFLIWAGDMGNITDTLQQCLQCQDTVSLY
RLALQSVQEFMPSSKEKDYMREILCLISVSHNGVSECELIELCSELTWPVLSFLVYHLNK
MVVLRYSCGLLQFQHLQAEEAVRMEYMQGGQNIVSEYREKLVQYFTIQLSCDRVTWRSAD
ELTWLYQQQGEKQKLHRCLMNLFVSQNLYKRGHFAELLSYWQLVGKDKIAMATEYFDALK
QHEKLCEGEESMTCLADLYETLGRFLKDLGLLNQAVTPLQRSLEIRETALDPDHPSVAQS
LHQLAGVYVQSKKFGNAEQLYKQALEISENAYGSEHLRVAWELDALAVLYQKQNKYEQAE
QLRKRSLRIRQKAARRKGSMYGFALLRRRALLLEEVTLGKDTADNARTLNELGVLYYLQN
NLETAEMFFKRSLEMRERVLGPEHPDCSQSLNNLAALYNEKKQYDKAEELYERALDIRKR
ALSPDHPSLAYTVKHLAVLYKRKGKLDKAAPLYELTVEIRQKSFGPKHPSVATALVNLAV
LYCQMKKQVEALPLYDRAMKIYEDSLGRLHPRVGETLKNLAVLRYEEGDFEKAAELYKRA
MEIKEAETSVLGAKASSGHSSSGGDTYSLRNTLPVNVFTE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcatcgtccatggtcagccctggagaagttattgaggatacatatggcggt
ggagggggagaagcttgtgagattccggtggaggtgaagcctaaggcacgcctcttgcgc
agttctttcagacgtggaccatgggtgattggggctagttttaaatccactgcatcagtg
gaccttgaatatgctgctgaatatgaacgtctgaagaaggaatatgagatcttccgggtc
agcaaaaacaatgagattgcttccatgcagaagaaagaggtgaaactggatgaggaaaac
aagagactgagagcagagctacaggctcttcagaagacatatcagaagatcctcagggag
aaggaaaatgcggttgaagctaaatatcaggctatggagagagctgctacttttgaaaat
gacagagataaggtgaaaagacagtttaagatctttagagaaacaaaagaaaaagagatc
caagatttgcttagagcaaagcgagaccttgaagccaaactgcaaagactacaagctcag
gggatacaggtgtttgatccaggcgagtgtgattccgatgacaacgacactgatgtgaca
gttcccggcacacagtgtgactattggacaagtggagccttaggaagtgagccctccatg
ggcagcatgatgcagcttcaacagtcgtttcggggaccagagtttgctcacagttctatt
gatgttgaaggaccctttgctaatgtaaacagagatgactgggatgcagcagtagctagc
ctgctacaagtcacccctctcttctcacaggctgtgtggagcaacactgtacgatgttac
ctaataaacacaaaggatactcagcctgaagtagacatcttcctaaaggaatactcttca
aagctacagaggatgtgtgaaaatttgggctatttcttccaagttgtctgtttccctgaa
gaatgtgggaaccattacactgcagtgcggaagtgggaaattgaaaagagttcccttgtt
gtattattcatttgttcttccttgaccagttcattgtgggaagactgtaaggaagcattt
ttgaagaatactgaggcaaagcctcggattgtgtatcacaaattagagggcagtgccagt
gacttagactgcatgcagcagttaatagaacaagacccgaataaatcaaacaaaaccaag
atcattgaccacagcggagatcctaatgaaggagtttataaggcctattgtcaagtagaa
aaggtcataaaacaggatttgttggctgctgagatatcagaccccgattccaaagatgat
acagcaatccaggaagatgatgattttggagatgtcctgtgggatgttcatgatgagcag
gagcaaatggaggctttccagcatgcatctcattcaacatgtgagctcgggtttgataaa
tattatgatcgtttgaatgatttggtggctgccccagctcctatcccacctctccttata
acaggaggaccaggctcagggaaatcccttctcctatcaaagtggattcagcttcagcag
aagcattcaccaaacactctgatgttgtatcactttgttggaaaaccaatgtctaccagc
tcagagccagcactcgtcataaaaagactgacccttaagctaatgcaacattcctggtca
atctcatcattctcaatggaccctggaaagttcttggaagaatttcctcactggcttgaa
aaactttccattcgctaccaaggaaatattatcatcatcattgactccattgaccaagta
gagcatccagaaaagcatatgcaatggctcattgatcctttaccagtgaatgtccgagtt
attgtctcagtaaatgtggagacttgtcctcaggcatggaggttgtggccaactcttcat
ctcgatccattaaattctaaagatgtgaaggcacttttaaatctcgaatgcagtggagct
ggtattgtactgaccaaagaacaggaaagaaaactggaaagacactgtcggtctgccacc
ccctgcaatcccttatatgttactttgctggctagatttctcatttgggctggggatatg
ggaaacattacagacactttgcagcaatgtttgcagtgccaggatacagtgtcactatac
agacttgcacttcaatctgtgcaggagttcatgccaagttcaaaagagaaggactacatg
agggagattctttgccttatcagtgtcagccacaatggtgtgagcgaatgtgaactgata
gagctgtgctcagaactgacatggccagtattaagttttctggtgtaccacctaaataaa
atggttgtgttacgatacagctgtggtctgctccagtttcagcatttgcaggcagaagag
gctgtgagaatggagtatatgcaaggaggtcaaaatattgtctccgagtacagagagaaa
cttgtgcagtacttcaccatacaattaagctgtgaccgtgtgacatggaggagtgcagat
gagctcacttggctgtaccagcaacaaggcgagaaacagaagctgcacagatgtctaatg
aacctctttgtgtcccagaatctctataaaagggggcattttgctgagctgctcagctat
tggcagcttgtgggtaaggacaaaatagccatggctacagaatactttgatgctttgaag
caacatgagaagctctgtgaaggagaggagagcatgacctgcttggcagacctgtatgaa
acacttggacgatttctcaaagaccttggtcttctcaatcaggctgtgacacctcttcag
cgctcgttggaaatccgagaaactgctctagacccagaccatcccagtgtagctcagtct
ctacaccagctggcaggtgtctatgtacagtccaaaaagtttgggaatgctgagcagctg
tataagcaggctctggagataagtgagaatgcctatggcagtgaacacctgagagtggcc
tgggaactggatgctctggctgtgctatatcagaagcagaacaaatatgaacaagcagaa
cagctaaggaaaaggtcattaaggattcgacagaaagcagcgagaagaaaaggcagtatg
tatgggtttgcattattaagacgccgtgctcttctgctggaggaagtaacgctgggcaaa
gacactgcagacaatgctcgaacactgaatgaacttggagttttgtattacttacagaat
aaccttgaaacagcagaaatgttttttaaacgttcactggaaatgagggaacgggtcctg
ggtccagaacatccagactgctcacagtctctcaacaatctggctgctttatacaatgag
aagaagcaatacgacaaggcggaggagttgtatgaaagagcattagacataagaaagaga
gctctgtctccagaccatccatcattggcctatacagtaaaacatttagctgtgctttac
aaaagaaaaggaaagcttgacaaagccgcacctctgtatgaactcactgtagaaatccga
cagaagtcatttggtcccaaacacccgagtgttgctactgccttggtgaatcttgccgta
ttgtactgtcagatgaaaaaacaagtggaagctttacctctctatgaccgtgccatgaag
atttatgaagacagcttggggcgactgcaccctagggttggagaaacactaaagaactta
gctgtactaaggtacgaagaaggtgactttgaaaaggcagcagagctgtataaaagagcc
atggaaattaaagaagctgaaacatcggtgttgggggctaaagcttcctctgggcactcc
tctagtgggggagacacgtatagtctcaggaacactttaccagtcaatgtcttcactgaa
tga
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integrated database retrieval system
