Nanorana parkeri (Xizang Plateau frog): 108786726
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Entry
108786726 CDS
T04897
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K19720
collagen type III alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108786726 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108786726 (COL4A3)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108786726 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
108786726
NCBI-ProteinID:
XP_018411581
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MMSFVQITSLLCILAVAYPSLVLAQQQEQVSACTHDGQLYADRDVWKPEPCQICVCDGGN
VLCDEILCDDTDPECPNPEIPFGECCPICSTASPPTPTNGGVKTGTKGEKGDKGTNGIPG
RNGENGGPGVPGPPGPPGICENCASPGGPYQPQYDSKSGYDFKSGGGQMGSQSMLGHPGP
PGPPGPSGPAGQTGPHGYQGPPGESGQSGPPGPPGPSGLIGPPGQPGKDGESGRPGRPGE
RGVAGAPGNRGPPGMSGFPGMKGHRGIDGRDGTKGDTGSAGARGEPGAPGDNGLPGSAGP
RGQPGERGRSGSPGTAGARGNDGAPGSSGQPGPPGPPGNAGFPGGAGPKGEAGSPGSRGS
DGSPGSRGESGPQGPAGLTGPSGPPGRDGNPGGKGEIGPAGMAGAPGLGGARGAPGPPGT
NGAPGLRGPSGESGKDGGKGEPGQRGERGESGAPGAPGPAGEEGKKGTNGEPGTNGVPGT
PGERGTPGYRGPAGSNGAPGEKGPAGERGQPGTAGPRGSPGESGRDGIPGPPGMRGSTGS
PGGPGSDGKPGPQGPAGESGRSGNPGPSGPRGSPGVMGFPGPKGTEGQPGKNGDRGAPGS
SGPQGLPGKSGESGGQGPPGAAGPPGERGEPGATGPGGFQGLPGAPGPAGENGKPGEAGP
KGEVGAPGTSGGKGENGIPGERGLQGSPGSPGTRGASGPPGPDGGKGPAGPPGSAGGMGP
PGLQGMPGERGGFGNPGPKGEKGEPGGKGSDGFPGKDGLRGSAGPIGPPGPAGPSGDKGE
GGSAGPPGPVGARGGPGERGEPGPHGPAGFPGSPGQNGEPGGKGEKGGPGERGEPGPQGA
GGSPGGPGPAGNSGPQGSKGDRGAPGSLGAAGFPGARGLPGPPGSNGNSGPSGPPGGPGK
DGPPGPAGSTGPPGSPGSSGPKGEPGTQGERGSPGNRGESGAPGPSGINGPAGTRGIVGL
PGLQGRPGTPGLPGAKGEDGKSGSNGSPGERGFPGSAGAAGINGAPGEAGRDGNPGSDGL
PGRDGSAGSKGDRGENGSPGAPGSPGHPGAPGPAGSAGKNGDRGETGPSGPAGPSGPSGA
RGAPGPQGTRGDKGEAGERGTNGMKGHRGMPGNPGPPGSTGPSGEQGVAGSPGPLGPRGP
PGSNGAPGKDGISGYPGPIGPPGPRGSRGESGPEGSSGHSGPPGQPGPPGPPGPCCDGGG
ANLGSFGGEKGPAGAPYYGDQPFDTTTSAEIMTSLKTINGQIENIISPDGTRKNPARNCR
DLNLCHPEYKSGEYWIDPNQGCRMDAIKVFCNMETGETCMNANPRIAPQKNWYTSSGTDK
KHVWFGESMNGGFQFSYGDPELPEDISDVQMAFLRILSSRGYQNITYHCKNSIAYMDAQN
GNVKKAVKFMSSTESELKAEGNSKFTYSVLEDGCTKHTGEWGRTVFEYRTRKTMRLPIVD
IAPMDIGGANQEFGIEVGPVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaataacctccctgctctgcatccttgcagtggcttacccgtcc
cttgttttggcacagcagcaagaacaagtgtcagcatgtactcacgatggacagctttat
gccgacagggatgtctggaaaccagaaccttgccaaatttgtgtttgtgacggtgggaac
gttttgtgtgatgaaatcctgtgtgatgataccgatcctgagtgccctaaccctgagatt
ccatttggagagtgctgtccaatatgttcaacagcttcacctcctacccctactaatggt
ggtgtaaaaaccggaacaaaaggagagaaaggtgacaaaggcactaatggcattcctggc
agaaatggtgagaatggcggtcctggtgtacctggtcctcctggccctcctggaatttgt
gaaaactgtgcttcccctggagggccctaccagcctcaatatgactcaaaatctggatat
gatttcaaatctggcggaggtcaaatggggagtcaatcaatgcttggtcatcctggacct
cctggccctcctggaccatctggccctgctggacagactggacctcatggttatcaagga
ccccctggcgaatctggacagtctggaccacctggaccaccaggtccatcaggacttata
ggccctcccggtcagccaggaaaagatggtgagtcaggccggccaggcagacctggagag
cgtggagtggctggtgctcctggcaatagaggaccacctggcatgtctggtttccctggt
atgaaaggccacagaggcattgatggaagagatggcacaaagggagatacaggttctgct
ggagctaggggagaacctggtgctcctggtgacaatggattacctggcagtgcaggtcca
agaggtcaacctggtgaaagaggtcgttctggatctcctggaacagctggtgcacgtggt
aatgacggagctcctggatcttctggccaacctggtcctcctggcccccctggtaatgct
ggattccctggtggtgcaggtcccaagggtgaagctggatctcctgggtctcgtggttct
gatggttctccaggatctagaggcgaatcaggccctcaaggccccgcgggtttaacaggc
ccttctggtcctcctggcagagatggaaatcctggcggtaaaggtgaaattggtcctgcc
ggtatggctggtgctcctggtttgggtggtgctcgtggtgctccaggtccccctggtact
aatggagcacctggcttaagaggtccttcgggagaaagcggcaaagatggtgggaaagga
gagcctggtcaaagaggagaacgtggggaatctggtgctccaggtgcacctggacctgct
ggagaagaaggcaaaaagggaactaatggtgaaccaggcactaatggtgtaccaggaaca
ccaggagaaagaggtacaccaggctaccggggtcccgcaggtagcaatggagccccaggt
gaaaagggacctgctggagaacgtggacaaccaggcaccgctggtccaaggggaagtcct
ggtgaatccggaagagatggaatccctggaccaccaggaatgaggggttctactggaagt
ccgggtggtcctggatctgatggcaaaccaggaccccagggtcctgctggagaatctgga
cgatctggcaaccctggtccatcagggccaagaggttcacctggcgtcatgggttttcca
ggtccaaagggtactgagggccaacctggtaaaaatggagataggggtgctcctggatct
tctggaccacagggtcttcctggaaagagtggcgagtcaggaggtcagggccctccaggt
gctgcaggacctccaggtgagcgaggagaaccaggagcaactggacctggtggatttcag
ggtctaccaggagctcctggacccgctggagagaatggaaaacctggtgaagcaggacct
aaaggcgaagttggtgctcctggaacctcaggtggcaaaggggaaaatggcattcccggc
gaaagaggtctacaaggttctcctggatctcctggtactagaggtgcttctgggcctcca
ggtccagatggtggcaagggacctgctggaccacctgggtctgctggtggaatgggacca
cctggtcttcaaggcatgcctggagaaagaggaggttttggaaatcctgggccaaaaggt
gaaaagggagaacctggtgggaaaggttcagatggatttcctggaaaagatggattaaga
ggatctgctggccccattggtcctcctggccctgctggtccatctggagacaagggtgaa
ggtggctcagctggacctcctgggcctgttggtgcacgtggtggccctggggagcgtggt
gaacctggtcctcatggtcctgctggcttccctggatctcctggtcaaaatggtgaacct
ggtggtaaaggagaaaaaggtggtcctggtgaacgaggtgaacctggtcctcaaggtgca
ggtggttctccaggtggccctggtcctgctggcaattctggtcctcagggatcaaaagga
gaccgtggtgctccaggatcacttggtgcagctggtttccctggtgctcgtggtttacct
ggacctccaggtagtaatggcaattctggtccttctggtcctcccggaggccccggaaag
gatggtccacctggtccagctggcagtactggtcctcccggtagtccaggttcttcaggt
ccaaagggtgaaccaggcacacaaggagaaaggggatcaccaggaaatcgaggagaatca
ggtgctccaggtccttcaggcattaatggtccagctggcactcgtggtattgtaggatta
cctggcttacagggtagaccaggcactccaggtcttccaggcgctaagggtgaagatgga
aaatcaggtagcaatggatcacctggtgaacgtggtttccctggttcagcaggggcagcc
ggtattaatggggctccaggagaagctggaagagatggcaaccctggctctgatggtttg
cctgggcgtgatggatcagctggatctaagggtgaccgtggtgaaaatggctctcctggt
gctcctggatctcctgggcacccaggtgccccaggtcctgctggctcagctggaaagaat
ggagacagaggagaaactggtccttctggtcctgccggcccatctggtccttctggtgct
cgtggagctcctggaccacaaggtacacgcggtgataaaggtgaggctggtgagcgtggt
accaatggaatgaaaggtcatcgtggaatgcctggcaaccctggcccccctggctcaact
ggaccttcaggagaacaaggtgttgctggatcccctggtcccttaggccctaggggtcct
ccgggatcaaatggagctccaggcaaagatggcatttctggatatcctggacctattggc
cctccaggtcctcgtggaagcagaggagaatctggcccagagggttcatctggtcactct
ggacctccaggacagcctggtccccctggtccacctggaccttgctgtgatggtggtgga
gcaaatctagggtcatttggtggggaaaaaggaccagctggggccccctactatggtgac
caaccgtttgatacaactaccagtgctgaaattatgacttcccttaaaacaatcaacggc
caaatagaaaacattattagtccagacggcacaagaaagaaccctgcccgtaactgtcgt
gatctcaatttgtgtcacccagagtataagagtggagaatactggatcgaccccaaccaa
ggctgtagaatggatgctattaaggttttctgcaacatggaaacgggtgaaacttgtatg
aatgccaatccaagaattgccccacaaaagaactggtacaccagctctggaaccgataaa
aaacatgtttggtttggagaatctatgaatggtggtttccagttcagctatggagaccca
gagcttccagaggatatatctgatgtccagatggcattccttagaattctgtccagcaga
ggctaccagaatatcacttaccactgcaagaacagcattgcatacatggatgcacaaaat
ggaaatgttaagaaggctgtgaaattcatgagttctaccgaaagcgagcttaaagccgaa
ggaaacagcaaatttacatacagtgttttggaagatggttgcactaaacacacaggagaa
tggggccgaacagtatttgaatacagaacacgcaagacaatgaggttacctattgtagat
attgcaccaatggatatcggcggagcaaaccaagaattcggaattgaagttggccctgta
tgctttttgtaa
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integrated database retrieval system