Nanorana parkeri (Xizang Plateau frog): 108787048
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Entry
108787048 CDS
T04897
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108787048 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
npr04091
]
108787048 (FREM1)
Lectins [BR:
npr04091
]
C-Type lectins
Lecticans
108787048 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
108787048
NCBI-ProteinID:
XP_018411995
LinkDB
All DBs
Position
Unknown
AA seq
2176 aa
AA seq
DB search
MNPCWRCHLYPSFALMLLTLKFLSTTFIKVNNGITVMKGQSSYLSGEDLQFSIPKEKDAC
KVEVIVNEPITQRVGKLSPQVFDCHFLDKEVEYVHNGCPILHEDDVMLRLYRFTENETIT
ENFILRVKLIEPDCNIVKLGPKNMEVTEFYGLSNVIDKNILSLDYEKRMNLECTIRVANM
ESHLPAHGQLVTGDPVKEQPRGDHPSSYFSSSNQKPSPLCKRGDCIPGLNKLSKIIKTSC
ENFLLMGIRYQHLDPPSPSIDYISIRLDLTDTRSRSLYKSEHAWIPVHIRDAVPNQIPKA
AFMSMFILEVDQFILTPLTTATLDAVDDETKKPLLVFNITDPPREGYITHLSDHTKPITS
FTWQDLNDMLIGYQPPNSSHTERRNLEVEVEVHDFFFERSLPITVHISIRTADTNAPRVS
WNMGLDLLEGQSRPITWEQLQVVDNDNINAVRLVIVDGLEHGRITVRGGKGFMFTVKDIQ
AGVVCYHHDDSDTAKDFVVFRIFDGRHSIRHKFPINILPKDDSPPFLIANTVIELPEGQT
VLIQGSMLCASDMDSSDDYIRFNITKQAAAGSIMKKPGQNALAYPVTTFLQRDLFNGIIY
YKHHGGEVFEDSFEFFLCDSHTPPNFSGPQTVIIHITPVDDQLPKEVPGTVHHVLVKETK
IVYITKKHLHFIDTESPERELIYTVTTPPCWISPSSGLDAGKIILVETIPRLVKDHAADM
ILTFTQHAVSHMKVAYMPPMEDIGPDAVHVRFVLSVRNHHGGTVHGICFNITLLPVDNQP
PQVFTFDMSVEEGGSQQMTMDYIRIIDKDTTQDHLGIILQKAPLHGMVQLDGRTVNEGEQ
ISYQDLIMLKLRYQHDGSESLWDEVKFIATDGINSADFLLKIQVFPVNDEPPIMKDNLLP
TIYCAEGEGVVISSDYIYAVDADSDDMKLTFMIARQPRWGIVLRAGITVDRFSQRDILQG
TVIYRHTGGEIGLQPCFDTITLVISDAELDADIKCCFNTHHNPLLPNHDSFPVYDLNITV
FPVDNQAPSITIGEIFSVEEGKSRAFSVSHLFANDPDTDSNNLKFILASPPQYGYIENVL
PSPGFEKSNMGISIDAFLLKDIISLNVNYVQSRHQRMEPTADQFMFYVTDGKHRSVEKPF
YIVISPTNDEVPEFMARNITVEEGEMIELNPSIINVSDMDVPPNQLLFSVVLQPQHGMIL
ENNYGTHHMKELLKSLKSNTLPMANHSDHILMCTTNMFFISLGMKLVYLHDDSENLADSF
TIQLSDGKHEVKRTIFVTVNGINDEKPVPTTHCEVVLSMGEHYIISSAVLSAEDKDTPRE
QIHYVIESIPDQGQLQMKTNNIWGNIQAGMKCTQEDIDMNLVRYVHTGIVGSKNQDSFTF
HLWDGRNRSPQMQFHITVKDMEKGDIVVSLKMLHVSRGDRAIISTDVLFASDGTDKPEEL
LYVLSSPPQYGQIEYVNHPGIPITSFSQMDVAAQTVCYFNNGKTAAAADMFKFLVSNGLQ
TKHGTLLVAVEMVDRTPPTLSKNYGLKQMKGSVALISPDILQTMDPDTAAENITYMLKEH
PQYGQIYLRGSLLQKNNFTQRDIDNMHVAYRHRGQDAQIDKFTFVVTDRSNQGFLIDGKV
QFDPVPFIIQVDFPDDTSPKIVHLQCATKVQHIRDGQYGIYITSRELKAIDPGTEDENII
FKILNGPHKSYLENVTSGGIIKEQFTQKDLNCKSILYTINPSLDVYDDAIEFEVSDPAGN
KALPQILSLKWSRIDLLQVKYEVCETEAVVYLKLTRRGYPVDSAFITVMVNGISAKDGKD
FSTSPTKLIQFDPGVSTKTWNIAITQDGLEEDDETFEVILNSPVNAVLGTKTRAVVKIVD
PRGGSCQRNAREGLRNCTSQPAQSACSIDLAEVLLPNIKKTDGDIRGDVSEEVSLVQTGK
KRLRVFGNGKSVKPSSVYHIGNDTIYRYHSMVSLKVEEVKQSFNSTQTAKLSVRNQGQQR
MKVPVQNTELLQSDRASISSDTAKQEKSMTFPKKCTPDLKGLLHFDDKSQNLYKCNGISW
NTWEAKVKATKCPFGWTPHDSSCYKHITEQKATWITAARICQEQYRATLVDIFSKEQMDW
LWNFSGRKSFWIGLTNRVNSDNWEWSKGEKTTFTNWKRRSPRRTRKGKNCVSVQKKGKWH
VKNCQKSNHYICSKRV
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctgctggagatgtcacttatatccctcatttgctttaatgctgctgacttta
aagtttctgagcacaacttttatcaaagtaaataatgggatcacagtgatgaaaggacaa
agcagctacctatcaggagaagatctacaattctccatccccaaagaaaaagatgcctgc
aaagtggaagtcattgttaatgaacccataacacaaagagttggaaagctgtctccacag
gtatttgactgtcatttcctggataaagaagtagagtatgttcacaatggctgccccatc
ttacatgaagatgatgttatgctcaggctatacaggtttacagaaaatgaaaccatcact
gaaaactttatacttagggtgaagctaatcgaaccagattgtaatattgtaaagctggga
cccaagaatatggaagtaacagaattttatgggctgtcaaacgttattgataagaacata
ttgtccttagactatgaaaaaaggatgaatctggagtgcactattcgagtggccaatatg
gaatctcatttgccagctcacggacaactggtcactggagatcctgtgaaagaacagcca
cggggagaccatccatctagctacttcagtagctccaaccagaagccgagtccattgtgc
aagcgtggagactgcattccaggtctaaataaactgtcaaagatcataaaaaccagctgt
gagaacttcctcctgatgggtatcaggtaccagcacctagaccccccatcaccgagtatt
gattatattagcatcaggcttgatcttactgacacaagaagcagatccttgtacaagtca
gaacatgcctggattcctgtccacatccgagatgcagtgcccaaccagatcccaaaagct
gccttcatgtcaatgttcattttggaagtggatcagttcatccttactcctctgactaca
gcaacacttgatgcagtagacgatgaaacaaagaaacctttgctggtcttcaacatcaca
gaccctccacgagagggatacatcacccatcttagtgaccataccaagcccattacctcc
tttacatggcaagatctcaatgacatgctcataggatatcagccacctaacagtagtcac
acggaacgaagaaatttggaggtggaggttgaagttcatgatttcttttttgaaaggagt
ttgcctatcacagttcatatatccattagaacagctgacacaaatgcccctcgagtatcc
tggaatatgggtcttgatctcttggagggtcaatctcgaccaatcacatgggaacaactt
caagtggtagataatgataatatcaatgctgtccgcctggtcattgtagatgggctagag
catggacgcattactgtcagaggaggcaaaggatttatgttcacggtgaaagacattcag
gctggtgtggtctgctatcatcatgatgacagtgatacagccaaagactttgtcgttttc
cgaatatttgatgggcgccacagtattcgacacaagtttccaattaacatactccctaag
gatgatagcccacctttcctaattgcaaacactgtcatcgagcttccagaaggtcaaact
gttctcatacaaggctcaatgctctgtgcctctgatatggactcgagcgatgattacata
cgcttcaatataaccaagcaagcagccgctgggagcatcatgaagaaaccaggacaaaat
gctttagcttatcctgttacaactttcctgcaaagagacttgtttaacggtatcatatat
tacaagcatcatggaggagaagtctttgaagattcttttgaattttttctgtgtgacagt
catactccccctaacttctctggtccccagactgtgattattcatataacaccagtggat
gatcagcttcccaaggaagttcctggaacagttcatcatgtgcttgttaaagaaaccaaa
attgtttacattacaaagaaacatctacatttcatagacaccgagtctccagaaagagaa
cttatttacactgtgactactccgccgtgctggatatcaccatccagtggtctagatgct
ggaaagattatcctagtagaaactattcccaggcttgtaaaggatcacgctgctgacatg
atactgacatttacccagcatgcagtgagccacatgaaagttgcgtacatgccaccaatg
gaggatataggtcctgatgctgtacatgtccgatttgtattatcagtccgtaaccatcac
ggcggtacagtgcatggcatctgcttcaatattaccttacttccagtagacaatcagcct
cctcaggtatttacatttgatatgagtgtggaggaaggcggctctcagcagatgacaatg
gattatatccgcatcattgacaaggacacaacacaggatcatcttggtattattcttcaa
aaggcaccattacatggcatggttcagctggatggaagaactgtaaatgaaggagaacaa
atcagctaccaagacctcattatgctaaaacttaggtaccagcatgatggttctgaatcc
ttgtgggatgaagttaaatttattgctaccgatggtatcaattcagctgactttcttcta
aaaatacaggttttccctgtaaatgatgaacccccaattatgaaggacaatcttttaccc
accatatactgtgcagaaggtgaaggagtggtgatttcctcggattacatctatgctgtt
gatgcagacagtgatgatatgaagcttacattcatgattgctcgtcagcctcgctggggt
attgtcctaagggctggaatcactgtagaccgattctcccaaagggatatacttcaagga
actgttatctacaggcatacaggtggagaaattggattgcagccttgctttgacactata
acacttgttatttctgatgctgaattggatgcggacataaaatgctgttttaatacacat
cataaccctttactgccaaaccatgactcgtttcctgtatatgacctaaacatcacagtt
tttcctgtagataaccaggcaccatctattacaataggtgaaatattttctgttgaagaa
ggcaagtcacgtgcattttcagtgagccacttgtttgccaatgatcctgacacagacagt
aacaatttgaaattcatattagcatcacctcctcagtatggctacattgaaaacgttctc
ccatctccaggctttgagaaaagtaacatgggaataagcattgatgcatttttgctgaaa
gatatcatatcccttaatgtgaattatgtacagtcaagacatcaaagaatggagccaaca
gcagaccagtttatgttttatgtcactgatgggaaacatcgctcagtggagaagcctttt
tacattgtaatcagtccaacaaatgatgaagttccagagttcatggccaggaatattact
gtggaggaaggagaaatgatagagttaaatccctccataataaatgtgtcagacatggat
gtgcccccaaatcagttactattcagtgttgttctgcaaccccagcatggcatgattttg
gagaacaactatggtactcaccacatgaaagagttacttaaaagtctgaagagtaataca
cttcctatggccaaccatagtgaccacatattaatgtgtacaactaatatgttttttatt
tcattaggtatgaagctagtgtatttgcatgatgactcagaaaaccttgcagacagtttc
acaatccagctgtcagatggaaaacatgaggtcaagagaacgatctttgtcactgtcaat
gggattaatgatgaaaagcctgtgccgacaacgcactgtgaagtagtactaagcatgggt
gaacattacattatttcaagtgctgtactgtcagcagaagataaagatacgccgcgagag
caaattcactatgtgattgaaagcattccagatcaaggacaacttcaaatgaagacaaat
aacatctgggggaacatacaggctggtatgaagtgcactcaagaggacattgacatgaac
ctagttagatatgtgcacactgggatagtaggatcaaagaatcaagacagctttactttt
cacttatgggatggcagaaacagatcaccacaaatgcagtttcacatcacagtcaaagat
atggagaagggagacattgtagtgtctttgaaaatgctccatgtgtcaagaggtgacaga
gccatcataagtactgatgtgctctttgcttctgatggcactgacaaaccagaagagttg
ctctacgtgctctcctcaccgcctcagtacggccagattgaatatgtcaaccaccctgga
attcccataacaagcttcagtcagatggatgtggctgctcagactgtctgctacttcaac
aatggcaaaactgcagctgctgctgatatgttcaaattccttgtcagtaatgggctgcag
acaaagcatgggaccttgctcgttgctgtggagatggttgataggactccaccaacatta
tccaaaaactacggtcttaagcagatgaaaggatcagtagcactgatctctcctgacatt
cttcaaaccatggatcctgacacagcagccgaaaatattacatatatgttaaaggaacac
cctcaatatggacagatatatttgagaggttcacttctgcaaaaaaacaactttacccaa
agagatattgataacatgcatgttgcctatagacacagaggccaagatgctcagattgac
aagttcacatttgttgtgacagacaggtcaaatcaagggtttctaatcgatgggaaagtg
cagtttgatccagtacctttcatcatacaagtggactttccagatgacaccagtcccaaa
atagtccatcttcagtgtgctactaaagtccagcacattagagatggccagtatggaatc
tacattacatctagggaattaaaggctattgatcctgggacagaggatgaaaacattatc
ttcaagatattaaatggacctcacaaaagttacctggaaaatgtaacatcaggtggaatt
ataaaagaacaattcactcaaaaagatttaaactgcaaatctatattgtacaccataaat
ccctcacttgatgtgtatgatgatgctatagaatttgaagtttcagatccagctggaaac
aaagctttaccacaaatcttaagcctaaaatggtctcgtattgatttgcttcaagtcaag
tatgaggtgtgtgagacagaagctgtggtgtatttgaagctcacaaggagaggttaccct
gtagactctgccttcattacagtgatggtgaatggaataagtgctaaggatgggaaagac
ttttctacaagtcctactaaactcatacaatttgatccaggagtgtcaaccaagacttgg
aatatagcaattacccaggatggattagaagaagacgatgagacctttgaagtcattctg
aattctcctgtgaatgctgttcttggcactaagacaagagctgtagtgaaaattgtggac
cccagaggaggtagttgtcaaaggaatgctcgagaaggactacgaaactgcacctcccaa
ccagcacagagcgcttgcagcattgatctggcagaagttctacttcctaatattaaaaag
acagatggggacattagaggagatgtatctgaagaagtcagccttgtacaaactggaaag
aagagactccgggtctttggaaatgggaaatctgttaagccttcatctgtataccacata
ggcaatgatactatttatcgatatcacagcatggtgtcacttaaagtagaagaagtaaag
caatcatttaactcaacccagacagctaagttatcagtaaggaatcagggccagcagaga
atgaaagttcctgtacaaaacacagaactgctacagtcagacagggcctccatatcttct
gatactgctaagcaggaaaaaagtatgacctttcctaagaaatgtactccagacttaaaa
ggactcttgcattttgatgataagagccaaaatctttacaagtgcaatggcatatcatgg
aacacatgggaagctaaagtcaaggcaacaaaatgtccatttggctggactccacatgac
agcagctgctacaaacacatcactgagcagaaggccacatggatcaccgcagcccggata
tgtcaggaacagtaccgtgcaacacttgtagatatcttcagtaaagaacagatggattgg
ctgtggaacttcagtggcagaaagtcattttggataggcttaactaaccgagtcaacagt
gacaactgggaatggagcaaaggagagaagaccaccttcactaactggaaaagaagatca
ccccgccggacaaggaaagggaaaaattgtgtttctgtgcaaaagaaaggcaaatggcat
gtgaaaaactgccagaagtctaatcattatatctgctcaaaaagagtgtag
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integrated database retrieval system
