Nanorana parkeri (Xizang Plateau frog): 108787079
Help
Entry
108787079 CDS
T04897
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108787079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npr03009
]
108787079
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
Pre-60S particles
RNases
108787079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
DUF7006
KIX_2
Motif
Other DBs
NCBI-GeneID:
108787079
NCBI-ProteinID:
XP_018412030
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MLRSAGFFQLLPCPYTRGSGGCARPHCHFQHVSPKVLGEQSGDVSNSPSVLGPPREALGK
KFSELEKLKKAIETVKNEVEESQKKLLLYTNVTHTVQDILEVDSNCNILDTIQDEEKTRT
NKNHDRLVTCSKNNKKKYVVDRSCPATDLEYDPLLNYTAGFFSSSTKENENKTTVKQKCE
ELFDNPQKKPRTVSPIRLEIKLQESDDEDMLVIDAPPLEVAPKRKRPSKVSVTIEKQGSL
DEADVSTEESGATMECEILAPVDEASDTNGDSETNEAEASHNILTTCTNDGAQQYENPCD
AQISLAENTTSNVNEPKNYGADISVKSEESAEEQTNEMLENIDKPDSFCLLSEKSLDLCD
NEVVQNSSVDFEITEEDSATTALDITAANTLLIDEHKSQPETLYIPKKAHHEVIVVNSST
DDSSEEDTISDSEDPMDECLRIFNEFTECEAKKNSNQQPEEQPEEQPDAELQVKGSELLP
GQRKRIAHPSAKSDVKESSTILVPFRRSTPHQIPSQRIVQVHQQAVQISSAVKSGQAFIA
SSQKRTASSMSPAFHTFGQMVCFNLVEVQPFLPARSQISGQGSTLFTTVKSGFSQKRTIQ
TTPVKIPCRRRASVIPESTSKVPHETRQRYVNSFVEEFLKESSSVQEAFDKALTEEKSIY
DRCGSKNMYLSIAVNSLKKLRDQHNNNGPKYSSRREVAGSRKQDDKNELTGHTLYNFLKE
YLLSEDQLIENGYPRPNPEKPGSALIPNAGGKNINSDALRRVCCRCGEVYAVTMQSKHVR
KEECTYHSGRVRKHRVPGGMETRYSCCEAAVGAPGCQMAKLHVHEGQKENLDGFIKTFPK
LQPSDENPGIFSVDCEMCYTTHGLELTRVTVVNHSLQVVYDTFVKPDNEIIDYNTGFSGI
TEDNLKNNTTSIRDVQAIMLNLFSADAILIGHSLENDLIALKLIHDTIIDTSMVFPHRLG
LPHKRALRYLIADYLRRIIQDNVAGHDSIEDATACMELMLWKVKEDTKGRR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttacggtctgcaggtttcttccagcttctcccctgcccctataccagggggtctggg
ggttgtgctcgcccacactgccacttccagcatgtgtcacccaaggtactcggggagcaa
agtggagatgtcagtaacagtcccagtgtattgggaccacctagagaagccctgggtaaa
aaatttagtgaactggagaagctaaagaaagcgattgagactgtaaaaaatgaggtggaa
gagagccagaaaaagttactactgtatacaaatgtgacacatactgtgcaagacatactt
gaggttgacagtaattgtaatatattggataccattcaagatgaagagaaaactagaaca
aataaaaatcatgaccgtttagtcacctgctcaaagaacaataagaaaaaatatgtagtt
gaccgaagctgtccagctacagatctagagtatgatccattgctgaattatactgcaggg
ttttttagttccagcacaaaagaaaatgaaaacaagactacagtgaaacagaaatgtgaa
gagctgtttgataaccctcaaaagaagcctagaaccgtatctccaataaggcttgaaata
aaacttcaagaatctgatgatgaagatatgcttgttattgatgcaccaccactggaagtt
gctccaaaaagaaaacggccaagtaaggtttctgtcactatagagaaacaggggtcactg
gatgaagccgatgtatccacagaagaaagtggagctacaatggaatgtgagattttggct
ccagtagatgaggcttctgatacaaatggtgattctgaaacgaatgaagcagaagcttct
cataacatactaaccacctgtacaaatgatggtgcccagcaatatgaaaatccttgtgat
gcccagatttctttagcagaaaatacaacttccaatgtaaatgaacctaaaaattatggg
gcagacatttcagtaaagagtgaagaatctgctgaagaacaaacaaatgagatgttagaa
aatatagataaaccggattcattttgcctactttcagaaaagtctttggatttatgtgac
aatgaagttgttcaaaactcttcagtagactttgaaatcactgaggaggattctgctacc
acagcactggacataaccgctgctaatacattacttattgatgagcacaaatcccagcca
gagaccttatacataccaaaaaaagcacaccatgaagtcattgttgtgaattcatcaacc
gatgacagctcagaggaggacacaatttcagattcagaggaccccatggatgaatgtttg
cgaatttttaatgagtttactgaatgtgaagcaaagaaaaattcaaaccagcagcctgaa
gagcagcccgaagagcagcctgatgcagaattgcaggtgaagggaagtgagcttttacca
ggacagagaaaaagaattgcacatccatcagcaaaatctgatgtcaaagaaagcagcact
attcttgttccattcagaagatctaccccacaccaaataccatcccaaaggatagtgcaa
gttcatcagcaagcggtacagataagttctgcagtcaaaagcggacaagcctttatagct
tcatcacagaagagaactgccagcagcatgtcaccagcatttcacacttttggccagatg
gtttgtttcaatttagtggaagtccagccatttttgccagctagaagtcagataagtgga
caaggaagtacacttttcactactgtaaaatctggtttctctcaaaaaagaacaatacag
acaacaccagtaaagataccatgccgcagaagggcatcagttattcccgaaagcacttct
aaagtgcctcatgaaacaaggcagcgctacgttaactcctttgtggaagaatttttgaaa
gagtcttcatccgtccaggaagcctttgataaggctttaacggaagaaaagtccatttat
gaccgatgtgggagcaagaatatgtatcttagcatagctgttaatagccttaaaaagctc
agagatcaacacaataacaatggcccaaaatattcaagcaggagggaagtagctggttca
cgaaaacaagatgataaaaacgaattgacaggacatactctttacaacttcctaaaagaa
tacctcttgtctgaggatcaattgatagaaaatgggtatccccgaccaaatcctgagaag
cctggcagtgctttaataccgaatgcaggagggaaaaatataaacagtgatgctctgaga
cgagtttgctgtcgttgtggagaagtctatgcagtgacaatgcagagcaagcatgtacgt
aaagaagagtgcacttatcactctggcagagttcgaaaacacagagtcccaggtggcatg
gaaacacgctacagttgttgtgaagcagcagtgggagctccaggatgccagatggcaaag
cttcatgttcatgagggtcagaaggaaaatcttgatgggtttataaagactttcccaaaa
ctccagccttcagatgaaaatcccggcattttttctgttgactgtgaaatgtgctacact
acacatggtctggaactaacaagagtcacagtggtcaatcacagcttacaggttgtgtat
gatacttttgtgaagccggacaatgaaataatagactataataccgggttctctggtatc
acagaagacaatctgaagaataacacaacatccattcgagatgtgcaggccattatgctg
aacttattcagtgctgatgcaattcttattggacatagtttagaaaatgacttgattgca
cttaagcttattcatgatacaattatcgatacttcaatggtctttccacacagactaggc
ttgcctcataaaagagcactgagatatttaattgcagactacctcagacgtatcatccag
gataatgttgcgggtcatgattctattgaagatgctactgcctgtatggagctaatgctc
tggaaagtaaaagaggacactaaagggcggagataa
DBGET
integrated database retrieval system
