Nanorana parkeri (Xizang Plateau frog): 108787737
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Entry
108787737 CDS
T04897
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108787737 (SHPRH)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108787737 (SHPRH)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108787737 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108787737
NCBI-ProteinID:
XP_018412861
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MVALLDWSQYFRYTVLVEPHSGELRCALCVFVYNSGEHISDRIVWNVQSNYFWLEILIFP
YSSVNHYNFRRSVYETNAEDEKPLVMAGRRKRAPPAKLDDEAKKQLCWNMHEDRRNDPTL
EVNETDLDATTSFSLVNDKPESLFATLGPKIVSSELCTEEKKGSEIIFTQGFTDLTILNS
PLQVEDVWKVLLGIFSIYLKSTQHSQSFFHGCNLTLTRNASDSAQLLLCVHKRGTDKDDE
GTINSHITGNTEEQMVEASLGDELLEGLIWLQKKKLIALCQSQIEHDEMKVGIYLLESCL
SKPEFLSEGHRRMKKSGVIIQRLMEKFYNITIPDISEEDDEESDQELERQNIEELYDYVR
QTHQKEEQTLHEDVQHRALIPVLRPYQNDAVNWMLERENYKNVSSNENSLHALWREVTTL
DEVKIYYNPFCGSIIQEYPVASYVWPGGILADEMGLGKTVEVLSLILCHPRKDLQADLLM
LPEGRVVNYFIPTPPAETSKKRKAGDSRLIYPSLQVMILAAIKEMSVSKGVSVIGILKYV
SSVYSYDMQRNRRLLKKTLEKLLSKKIVEQVKGRGLQGSFKLGVNYKEQMTQDKQQTLRR
RSSSRTQHNRNHLRENNKELSETASDVNMMSKDHDYCALNRDNRPENDHHNSTTNGISKR
ISGFEACTLTDDSSTATSDSTAFPESVDLGLKTVDENFESPQRTFPSNTTDYRFECICGG
LQYPDLKDRVQCLQCHLWQHAECVNYKRGNVDKIPFYCPHCLVAMKPVPTGATIIISPSS
ICHQWVDEINRHVRSSSLQVMVYQGVKKHGFLQPQMLAEQDVVITTYDVLRTELNYVDIP
HSNSKDGRRFRNQKRYMAIPSPLIAVEWWRICLDEAQMVECTTAKAAEMALRLTGINRWC
VSGTPVQRGLEDLFGLVLFLGVDPFWVKHWWDQLLYKPYCRKDPLPLYRVVANIMWRSAK
KDVIDQIQIPEQTEDVHWLHFSPVERHFYHRQHEVCCQDAIAKLRKISDWSLKLSSLDRR
TVSSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVC
AFNGLAGIHIIKGEYTLATELYREVLRSSEEHKEKLKTDSLQRLHSTHNLLELLTAKHPG
IPPTLRDHKLEEEIKQLKEHYMTKSNAEVSEAHQALQPILQNLRELQRKINFSSPWWIDV
IQRAIHNDSDEDLVQRVQNEITTRYKHQANKLSMADKFRDCRGLQYIVTTQMEELKKCQK
LVRDAVKNLEGPPSQEIIQTASVCHLRVGRLPLHICVFCKADELFTDYESKLFAPTVKGQ
TAIFEEMIEEENGVVDDRLPKTSRGLWAASELERALKAILTFARSHRMDTWLNDEGATFM
ELFEAWKKEYKLLHEYWMVLRNHVSAIDELSMATQRIRIRLPDEPKPNPPVLHIIEPHEV
EQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCPICARSLGKQWAV
LTCGHCFCNECVAIMVEQYSVGARKSAIKCAICRQTTSHKEISYVFTSEAANEEQDVPVK
GSHSTKVEAVVRTLMKIQSMDPGAKSLVFSTWQDVLDIIAKALQDNDLVYSQINGIQRFQ
ENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQKK
ATIVHKFLIKATIEERMQAMLKTVDRSHTSTSMKQSEASVLTVADLADLFTEEREIE
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggttgctttattagattggtctcagtacttccggtacacagtgttggttgagcctcac
agtggggagttgcgctgtgcactatgtgtgtttgtgtacaattcaggggaacacatcagt
gatcgtatagtgtggaacgttcagtcaaattacttttggttggaaattcttatattcccg
tacagctcagtgaaccattacaacttcaggcgttcagtatatgagactaatgcagaggat
gagaagcctttagttatggctggtcgtaggaaaagggctcctccagcgaagctggatgat
gaagcaaagaagcagttatgctggaacatgcatgaagacagaaggaatgacccaacctta
gaagtgaatgaaactgatttagatgccactacatcattttctttagtaaacgacaaacct
gaaagtttgtttgctacattgggacccaaaattgttagttccgagctatgcacagaggaa
aaaaaaggatcggaaatcatctttacgcaagggttcactgaccttacaattctgaactct
cctcttcaagtagaagatgtatggaaagtgttgctaggtattttcagtatttatttgaag
tccacacaacattctcagtctttttttcatggctgcaatttaacattgactagaaatgct
tcagactcagctcagctactgctttgtgtccataaaagaggaacggataaggatgatgag
gggactataaattcacacattaccggtaacacagaagagcagatggtcgaagcctcactt
ggtgatgaattacttgaaggtttaatatggctgcaaaaaaagaagctaattgcactttgt
caaagccaaatagaacatgatgaaatgaaggttgggatctatttgttggaatcttgctta
tctaaacctgaatttctcagtgaagggcataggagaatgaaaaaatctggtgttatcatt
cagcgtctaatggagaaattctataacatcaccattccagatattagtgaggaggatgat
gaggagtcggaccaagagctagagagacagaatattgaagaactctatgactatgtaagg
cagacacatcagaaggaagagcagactctccatgaagatgtgcagcaccgagctttgata
cctgtgctccgtccataccagaatgatgctgtcaactggatgcttgagagagaaaactac
aaaaatgtgtcttctaatgaaaactctttgcatgcgttgtggagggaagtcacaacactt
gatgaagtgaagatctactataatccattctgtggaagtattattcaggaataccccgtt
gcttcttacgtgtggcctggaggtattcttgcagatgaaatgggcctcggaaagacagtg
gaagttctgagtttgatcctttgtcatccaagaaaagatctccaagctgacttgctgatg
ttacctgagggaagagttgtgaactattttattccaactccaccagcagaaacatctaaa
aagagaaaggctggagatagcaggctaatctacccaagtttgcaagttatgattctagca
gcgattaaggaaatgagcgtaagcaaaggtgtgtctgtcatcggcattcttaaatatgta
agctctgtatatagttatgacatgcagagaaaccgtcggctacttaaaaagactttggaa
aaattgctatcaaaaaagattgtggagcaggttaaaggacgtggacttcaagggtctttt
aagctgggggttaattacaaagaacagatgacacaagataaacaacaaacactgagaaga
agatcctccagcagaacacagcacaatcgaaatcatctcagagaaaacaataaagagctt
tctgagactgcttctgatgtaaatatgatgtcaaaggatcatgactactgtgctctaaac
agagacaataggccagaaaatgatcaccacaactcaacaacaaatgggatctcaaaaaga
atttctggttttgaagcttgtactttaacggatgattcatctacagccactagtgacagc
acagcttttcctgaatcggttgatctgggactaaaaacagtagatgagaacttcgagtct
cctcaaagaaccttccctagtaataccacggattaccgatttgaatgtatatgtggagga
ctgcagtatcctgacctaaaggacagagtacagtgcttacaatgtcatttatggcagcat
gctgagtgtgtaaactataagagaggaaatgtggacaaaatacctttttattgcccacac
tgtctagtagcaatgaagccagtccccacaggagcaaccataataatttcccccagttcc
atttgccaccagtgggtagatgaaattaaccgacacgtgcgctcatcctctctacaagtt
atggtttatcaaggtgtcaaaaagcatggctttctgcagcctcagatgttggcagagcaa
gatgtggtgataaccacttatgatgttctaagaactgagttaaattatgtggacatccct
cacagcaacagcaaagacgggcgcaggtttcggaaccaaaagcggtacatggctatacca
agcccactcattgctgtggagtggtggaggatttgtttagatgaagcacagatggtggag
tgcacaacagcaaaggctgctgaaatggccttgcgtctaactgggattaatagatggtgt
gtgagtggtaccccagtgcaaagaggattggaagatttgtttgggctcgtattattcctt
ggagtggacccattctgggtgaaacactggtgggaccagcttctctacaagccatattgc
cgaaaggatcctctaccattataccgtgtcgtagccaatataatgtggagatctgcgaaa
aaggatgtaattgaccagattcaaatcccagagcaaacagaagatgttcattggctgcat
ttctccccagtggaaagacatttctaccacagacagcatgaagtatgctgtcaggatgcc
atcgctaaattacgcaaaatctcagattggtctctcaagctgagtagcttggacagaaga
actgtgtcctccatcttgtatcccctgctgagattgaggcaggcctgttgccatccgcag
gctgtccgtggagagtttttaccattacagaagagcacaatgacaatggaagagttgctg
acatctctgcagaagaaatgtcgtaccgagtgtgaagaggcccatcgtcagctcgtttgt
gcttttaatggtctggctggaatccacatcattaaaggtgagtacacattggctacagaa
ttatatagagaagtattgaggtcgtcagaagaacacaaagagaaactgaaaactgactct
ttacaaaggctgcattctacccacaacctgttggaactgctgacagcaaagcaccctggg
atcccaccaacacttagagatcacaaactggaagaagagataaaacagcttaaagaacac
tacatgaccaaatctaatgccgaagtgtctgaagctcaccaagctttgcaaccaatccta
caaaatttaagagagctacaacgaaagataaatttttcctccccctggtggatcgatgtg
atccagcgtgccatccataatgacagcgatgaagatcttgttcagcgtgtacaaaatgaa
ataacaaccagatacaaacatcaagctaacaagctgtccatggctgataaattccgggac
tgccgaggacttcagtacattgtcacaacacagatggaagaactgaagaagtgccagaaa
ctggtgagagatgctgtaaagaatcttgagggccctccttctcaagaaattatccagact
gcatcagtatgccaccttcgagttggtcggcttccactccacatctgtgtcttttgtaaa
gctgacgaattattcacagattatgagtcaaagctcttcgctcctacggtaaagggtcaa
actgccatttttgaagagatgattgaagaggaaaatggtgttgtggatgatcgcttaccc
aaaacaagtcgaggtctgtgggccgctagtgagctagaacgtgctctaaaagccattctg
acatttgctagaagccaccgcatggacacgtggctaaatgacgaaggtgccactttcatg
gagctatttgaagcatggaagaaagaatacaagttacttcatgagtactggatggtctta
agaaatcacgtttcagctatcgatgaactttccatggcaacccaacgcattagaatccgt
ctccctgatgaaccaaagcctaacccccctgttcttcatattattgaaccgcatgaggtg
gagcagaaccgtgtaaagctgctaaatgacaaagctgttgccaagtcacaactgcagaag
aagcttgggcagctcctttatctcactaatttagagaagtctcaggataaaacaaccgga
ggagtgaatccagagccctgcccaatatgtgcccggagtctaggaaaacagtgggcagta
ttaacctgtggtcactgcttttgtaatgagtgtgtggcgatcatggtagaacagtacagt
gtcggtgctcgtaaaagtgccatcaaatgtgcgatttgtcgtcagaccacctcacataaa
gagatttcctatgtgttcacaagtgaagctgcaaatgaagaacaggatgttcctgtaaag
ggaagccattccaccaaagttgaagcagtagtcagaactcttatgaaaatacagtccatg
gaccctggagccaaatcattggtgttctctacgtggcaagatgtgttggatataattgct
aaagctctgcaggacaatgacttggtgtactcacagattaatggcattcagagatttcag
gaaaacctttcagcatttaaatatgatcctaagatcaacattttgcttcttccactgcac
actggatccaatggccttaatatcattgaagcaactcatgtgttactggtggagcctatt
ctgaacccagcacatgagctacaagcaataggtcgtgttcatcgcattggccagaaaaaa
gctacaatcgttcataaatttctgattaaagcaacaattgaagaaaggatgcaagcaatg
ctaaaaacagtggacagaagtcacacaagcacatccatgaagcagtctgaagcttctgtt
ctgactgttgctgatcttgctgacctgtttaccgaagagagagaaattgagtaa
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integrated database retrieval system
