Nanorana parkeri (Xizang Plateau frog): 108787932
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Entry
108787932 CDS
T04897
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108787932 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npr04040
]
108787932 (TRPV1)
Ion channels [BR:
npr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108787932 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Ion_trans
Motif
Other DBs
NCBI-GeneID:
108787932
NCBI-ProteinID:
XP_018413134
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MRKMGSSSDLEETDHTEETNASADDSHSEENSHSAHENSQCIKIKQAKYAIFGSPKPRGR
RFGKADTEREMAPMDSVYQVESKMMSPTIKFHVNIEKGKQGNQLTRQSSSVESTNSCKDR
TFKLYDRTRIFDAVAYGDCQELDDLLVYLLRTQKHLTDKEFKEPETGKTCLLKAILNLNH
GKNYTIPLLLEIAEKTDNLKEFINAAYTDTYYRGQTALHVAIERRNMTLVELLVQYGADV
HARADGEFFRKAKGRAGFYFGELPLSLAACTNQIQIVQYLLQNQYSPANIAARDSFGNTV
LHSLVDIADNTVENTKFLTKMYSEILVLGAQIKPSLRLEDIANKKGLTPLTLAAKTGKIG
VFAYILRREIKNPECRHLSRKFTEWAYGPVHSSLYDLSGVDTMEKNCVLEIIAYSNETPN
RHDMLLVEPLNRLLQDKWDRFVKRVFYFNFLMYVAYITIFTIAAYYRPVQGDPPFPVDSM
LRTTGEVITLLGGVYFFFRGIQYFIHRRPTIKALVTDSHSEVLFFIQSVFLLLSAFLYCL
GQHEYVAFIVICLAMSWVNVLYYTRGFQQMGIYAVMIEKMIVRDMLRFMLVYILFLIGFA
AALVTLIEDGDSTRNETSYSNTKRCCKADPASFNSLYFTCQELFKFAIGMGDLEFTENYK
YKTIFVFLLITYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIEKSMLS
YITNRFRSGKSVLVGLTPDGKEDYRWCFRVDEVNWTKWNSNLGIINEDPGNCGMMKSPLN
ASFRISRKKTWKTLVPHIREFSIKGKRVKEPEETNVQLQPISEGFTEQESFEDGTAKPL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatggggagctcctcagatcttgaggaaacagaccacactgaggagacgaat
gcttctgctgatgactcacacagcgaagaaaacagtcattccgcccatgaaaacagtcaa
tgcataaaaataaaacaagccaagtacgccatctttggttcaccaaaacctagaggtcga
cgttttggcaaagcagacactgaacgagaaatggcccccatggactctgtctatcaagta
gaaagcaaaatgatgtctccaacaattaagttccatgtaaacattgaaaaaggaaaacag
ggtaaccagttaaccaggcaaagttcctctgtagaatccacaaacagctgtaaggacaga
acattcaagttgtacgatcggaccaggatttttgatgctgtggcctatggggactgtcaa
gaattagatgatcttctggtttatttactccgtactcagaaacatcttaccgataaagaa
tttaaagaaccagaaacagggaaaacttgtctactaaaagccattctgaatctgaatcat
ggaaaaaactataccattccactcttattagaaattgcagagaagacagacaatttgaaa
gaattcatcaacgcagcttacacagacacctattacagaggtcagactgctcttcatgtt
gctattgaacgaaggaacatgaccctggtggagctcttggtacaatatggagctgatgtt
catgcaagagcagatggggaattcttcaggaaagccaaaggaagggctggattctacttt
ggggaactgcctctgtctttagcagcgtgtacaaaccagatacagatagtccaatacctt
cttcagaaccagtactctccagccaacattgccgcccgtgactccttcggaaacacagtg
ctgcactcactggttgacattgcagacaacactgtggagaacacaaagtttcttaccaag
atgtattcagaaattttggtactgggtgcacagataaagccttccctgagactggaggat
attgccaataagaaaggtctcactcctttaactctagcagcaaaaactggcaaaattggg
gtgtttgcgtatatccttcggagggaaataaagaatccagagtgccgacatctctctaga
aagttcaccgaatgggcttatgggcctgtccactcttctctgtatgatctgtctggtgtg
gacaccatggagaaaaactgtgtgcttgagattattgcctacagcaatgagacaccgaac
cgtcatgacatgcttctagtagagcctctcaacagacttttacaagacaagtgggatcgc
tttgtcaaacgtgtattctactttaacttcctgatgtatgtggcatatatcaccatcttc
accatagctgcctactacagaccagtgcagggcgaccccccatttccagtagatagcatg
cttcgtaccacaggtgaagtgatcacgcttttaggaggagtctatttcttttttagaggg
atccagtacttcattcacagacgtccaactataaaggcattagtgactgacagccacagt
gaagtcttgttttttattcagtctgtctttctgctgctctctgcattcctttactgtctt
gggcaacatgaatatgtggcttttattgtgatttgtttagccatgagctgggtcaatgtc
ctctactataccagggggttccagcaaatggggatctatgctgtgatgattgagaagatg
attgtgagagatatgcttcgcttcatgcttgtctacattctgttccttatcggatttgcg
gcagcgctggtgactcttattgaagatggagacagcacaaggaatgaaacgagctattca
aacacaaaacgttgttgcaaagcagatccggcctctttcaacagcttgtacttcacctgc
caagaactgttcaaatttgccattgggatgggagacctggagtttactgagaactacaag
tacaagactatattcgtcttcctactgattacatacgtcattctcacctacatcctcctg
ctgaacatgctgatagctctgatgggggagacagtgaacaagattgctcaggagagtaaa
agcatctggaaactgcaaagggcaatcactatactggacattgaaaaaagtatgttgagc
tacatcacaaacagattccgatctggaaaatctgtgctggtgggattaactcctgatggc
aaggaggattacagatggtgcttcagagttgatgaggtaaattggaccaagtggaactca
aatttaggaataatcaatgaagatcctggaaattgtggaatgatgaaaagtcctctgaat
gcttcatttcgaatatcaagaaagaaaacatggaaaaccttagtgccgcacatcagggaa
ttcagcatcaaaggaaagagagtgaaagaaccagaagaaaccaatgtgcagctgcagccc
atatcagaaggtttcaccgaacaggagtcctttgaagatgggacagctaagccactgtaa
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