Nanorana parkeri (Xizang Plateau frog): 108787958
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Entry
108787958 CDS
T04897
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03030
DNA replication
npr03420
Nucleotide excision repair
npr03430
Mismatch repair
npr03440
Homologous recombination
npr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108787958 (RPA1)
03420 Nucleotide excision repair
108787958 (RPA1)
03430 Mismatch repair
108787958 (RPA1)
03440 Homologous recombination
108787958 (RPA1)
03460 Fanconi anemia pathway
108787958 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108787958 (RPA1)
03032 DNA replication proteins [BR:
npr03032
]
108787958 (RPA1)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108787958 (RPA1)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108787958 (RPA1)
DNA replication proteins [BR:
npr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108787958 (RPA1)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108787958 (RPA1)
MMR (mismatch excision repair)
108787958 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
108787958 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Por_Secre_tail
IBR
Motif
Other DBs
NCBI-GeneID:
108787958
NCBI-ProteinID:
XP_018413158
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MALPKLSEGSIASILQGETSLHPILQVINIRPINTAAGPPRYRLLMSDGLNTLSSFMLAT
QLNSLVDQNLLAANCICKVSRYIVNNLKDGRRVVIVMELEVLKGANLVSGKIGNPQPYND
GTPAATPAASAPVPAPAPVHSKPVQNSVPPPSMNRGKSKLFGGGSIVSTPGGSQAKVVPI
ASLNPYQSKWTIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATGFNEQVDKFFS
LIEVNKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETSVIPCDDDSDVPTVQFEFVPVSE
LENRNKDTLLDVIGICKSFDDVTKVTIKSNNREVSKRNIHLMDTTGKVVTTTLWGEDADK
FDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQVLEGTSI
SESRGSGGGGNTNWKSLLEVKNENLGHGDKADYFTSVATIVYLRKENCLYQACPSQDCNK
KVIDQQNGLYRCEKCDKEFPNFKYRLILSANIADFGENQWITCFQEAAESIIGQNAMYLG
ELKEKNEQAFEEVFQNANFRSYTFKIRVKLETYNDESRIKATAMDVKPVDHKEYSRRLIM
NIRKLAAQGV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccaaaactcagcgaaggctccatagcgagtattttgcaaggggagacgtca
ttacatcccattctgcaagtcattaacattcgtccaatcaacactgctgctggtcctcct
cgctaccggttgctgatgagcgatgggttaaacacactttcgtctttcatgttggctacc
cagctgaattctcttgtggatcagaatctccttgcagcaaactgtatctgtaaggtctcc
cggtacattgtaaacaaccttaaagatggaagacgtgtggtcatagtaatggagctggaa
gtactgaagggggcaaacttggttagtgggaagattggaaatcctcaaccttacaatgat
ggtacgccagcagcaacgccagcagcttcggctccagttcctgcaccagcgcctgtacac
agtaaaccagttcagaactcagttcctcctccttccatgaacagaggaaaatctaaattg
tttggtgggggaagtatagtaagtacacctggtggatctcaagcaaaggtggtgccaatt
gccagtctaaacccataccagtcaaagtggactatacgtgctcgagttaccaacaaaggt
caaattcgtacttggagtaactctcgtggggaagggaagcttttttctattgagatggtg
gatgagagtggtgagatccgagctaccggtttcaacgagcaagttgacaagtttttctcc
cttattgaagtgaataaggtatattacttctcaaaaggaactttaaagattgctaacaaa
cagtacacagctgtaaagaacgactatgaaatgacgttcaatagtgaaacttctgttatc
ccgtgtgatgatgactctgatgtcccaacggtgcagtttgaatttgttcccgtttctgag
ctggaaaacagaaataaggacacactactagatgttattggaatttgcaagagttttgac
gatgtcaccaaggtgactataaaatccaacaaccgtgaagtctccaagcgaaatattcat
ttaatggacacaacgggcaaggtggtaacaactactttgtggggtgaagatgcagataaa
tttgatggctccagacaacctgttgtggcaatcaaaggagcacggctgtcagactttgga
gggcggtctttgtcagtcttgtcatctagtactgtcatgatcaatccagatattcctgag
gcgttcaagctcagaggatggtttgattcagagggccaggtactagaaggtacatccatc
tcagagtctcgtggaagtggaggaggaggaaataccaactggaagtccttgctggaggtg
aagaatgagaatttgggccatggtgacaaagctgattattttaccagtgttgctactatt
gtgtatcttcggaaggagaactgcctgtatcaggcctgcccttcacaggactgcaataag
aaggtcatagaccagcagaacggcctctatcgctgtgagaagtgtgacaaggaatttccc
aactttaagtatcgcctcattctttcagcaaacattgctgactttggggagaatcagtgg
attacatgcttccaggaagcggctgaatcaattattggccagaatgccatgtacctgggc
gaactcaaggaaaagaatgaacaagctttcgaggaggtgtttcagaatgccaatttccgc
tcctacacctttaaaattcgggtgaagttggaaacgtacaacgatgaatctcgtatcaaa
gccacagctatggatgtgaaaccagttgatcacaaggaatactcaagacgccttataatg
aacatccggaaactggctgctcaaggagtctga
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integrated database retrieval system
