Nanorana parkeri (Xizang Plateau frog): 108788238
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Entry
108788238 CDS
T04897
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108788238 (PDZRN3)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108788238 (PDZRN3)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108788238 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Sina_ZnF
TOP6A-Spo11_Toprim
zf-rbx1
zf-TRAF
PDZ_Tricorn
TRAF2_zf
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
108788238
NCBI-ProteinID:
XP_018413477
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MGFELERFSGEVDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
AKELNHVLPLKSLILKLEIKCDNHSRGCDKVVRLQNLGEHAEMCDYTPAKCRNKGCTEVL
NLKDMDAHMREFCEHRAVGICQKGCGLMLTHREQKLGDHCCLKAVKGHNMLLQTKITGLE
TELKKRALRSSKREKSLMSQLSTVQSELQMTALRYQKKFTEYSARLDSLTKAVASPCKGE
ETTALTLLLHRESGSLGFNIIGGRSCVDNQDGPSSEGIFVSKIVDSGPAAKEGGLQIHDR
IIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMYNPSAGVQMMDMETQTEIT
FEHIMALTKISSPSPSVPGLNPYLLNEEHSPLHEYFDPNDFMGGLHQDIDRDELELEEID
LYRMNSQDKLGLTVCYRTDDEDDMGIYISEIDPNSIAAKDGRIREGDRIIQINGIDVHNH
EEAVALLTSEDATNVFLLVARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTAS
MLEQKKIEEDGGTTDTATILSNQLEKDSGVGRTDESTRNDESSEQENIADDHTMLSNTLE
RQKKLMYSQDTLGSGDMQFSNESFISADCTDADFLGIPMDECERFRKLLELKCQVQSANQ
RSRYYQTSTMETNRSDQEGVDRELEMLNEELQNIELECLNIVRAHNMQQLKEQYRESWML
HNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRR
TADALNSCPEGAASSGPYNASQKNVRSSGESRESSPARYLQTAKDSDTNKASEVRDKKVA
ELGKSQTSSEKQSSSFAPPYRHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLV
SMCKDLQNTSEPTMEWKVKVRSDGTRYITKRPVRDKLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHIRKASEQRKRREFMMQSRLDCLKEKQTAEDNKEVSIIDLSHKKM
MKKRNKKIFDNWMTIQELLTHGRKSPDGTRVYNSLLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaattggaacgtttcagcggggaggtggaccccgattttaagtgcaacctg
tgcaaccgagtcctggaggaccccctgaccaccccgtgcgggcacgtcttctgcgcaggc
tgtgtgctgccctgggtggtgcagcaaggcagctgcccggtgaaatgccaacggatctct
gccaaggagctcaaccacgtgctgcccctgaagagtctcatcctcaagctggagatcaag
tgtgacaaccactccaggggctgcgacaaggtggtcaggctgcagaacctgggggaacac
gccgagatgtgcgactacacgccggccaagtgcaggaacaagggctgcaccgaggtgctc
aacctgaaggacatggatgcccatatgagggagttctgcgagcaccgggcggtgggcatc
tgccagaagggatgtgggctcatgctgacccacagggagcagaagctgggcgaccactgc
tgtctgaaggcagtgaagggtcacaacatgcttctgcagaccaagattactgggctggag
accgagctcaagaagagggcattgaggtccagcaagagggagaagtcgttgatgtcccag
ctgtccactgtgcagagtgaactgcagatgacagcgctcaggtaccagaaaaagttcacc
gagtacagtgccaggctggattcactcaccaaggcagtggcttctccttgcaagggagaa
gagacgaccgcattgactctgctactccaccgagaatctggatccctgggatttaatatt
attggtggacggtcatgtgtggacaatcaggacgggccctccagcgaaggaattttcgtg
tccaagatagttgacagcggcccagctgccaaagaaggcggtcttcagattcatgacagg
attatcgaggtgaatggaaaggatctatctagagccactcatgaccaggcagtggaagcc
tttaagacggccaaagaacctatcgtggtccaggttttacgaagaaccccccgcacaaag
atgtacaacccttcggcgggtgtgcagatgatggacatggaaactcagacagaaatcact
tttgagcacatcatggctctgaccaaaataagttccccatctccatcagtacctggactg
aatccctatctcctaaatgaagagcactcgccacttcacgaatactttgaccccaacgac
ttcatgggaggattgcaccaagacatcgacagagacgaactagagttggaggaaatagac
ttgtacagaatgaacagccaggataagctggggctgacggtttgctacaggaccgatgat
gaagacgacatggggatttacatcagcgagattgaccccaacagcattgccgccaaggac
gggcgaatcagagagggagatcggataatacagattaatggcatcgacgttcacaaccac
gaagaagctgtggctctgctcacgagcgaagacgcaacaaatgttttcttactggtagca
aggccggaattgcagctggatgaaggatggatggacgatgacagaaatgattttctggat
gatctgcacatggatatgctggaggaacagcaccaccaggcaatgcaatttacagccagc
atgcttgagcagaagaagatcgaagaagacggtggaaccacagatacagcaaccatttta
tccaaccagttggagaaagacagtggcgttggccgtacggatgaaagcacccggaatgat
gaaagctcagagcaggagaacatcgctgacgatcacaccatgttatcaaacacgctggag
agacagaaaaagctcatgtacagtcaggacactctgggcagtggagacatgcagttcagc
aacgagtccttcatatctgccgactgtacggatgcagatttcctgggcatccccatggac
gagtgcgagagattccgaaaacttctcgaactgaagtgccaggtccaaagtgccaaccag
cgcagtcgatattaccaaaccagcacaatggagaccaaccgcagcgaccaggagggtgtg
gaccgtgaactggaaatgctgaatgaggagttgcagaacatcgagcttgagtgtttgaat
atagtccgtgctcataacatgcaacagctaaaggagcagtacagagaatcctggatgctg
cacaacagcggtttccgtaattacaacactagcatcgatgtgcgtcgacatgagctctct
gacatcaccgagttgcctgagaagtcagacaaggacagctcaagtgcctacaatactggg
gaaagctgccgtagcactcctttaactttggaaatttccccagacaactctttgcgcagg
acagccgatgccctcaacagctgtccagagggagcagccagtagcggtccctacaatgct
tcgcaaaagaacgtacgatcgagtggagaaagccgtgagtccagccccgccagatatctc
caaactgctaaggactcggacacaaacaaggcatcggaagtcagagacaaaaaggtcgcc
gaactgggcaaaagtcaaacctcttccgaaaagcagtccagttcttttgcgccaccctat
cgccactcaccttacaagcacgcccacatccccgcccacgcgcagcactatcagagttac
atgcagctgatccagcaaaaatcagcagtcgagtatgctcaaagccagatgagcttggtc
agcatgtgtaaagatcttcagaacacatctgagccaacgatggaatggaaagtgaaagta
cgtagtgacggaacccgctacatcaccaaaagaccggtgcgagataagttattaagagaa
agagccattaagatcaaagaagagaggagcggaatgacaacagatgatgatgccattagc
gagatgaaaatgggacgttattggagcaaggaagaacggaagcagcacattaggaaggcc
tcggaacagagaaaacgtagagagttcatgatgcaaagcaggttggattgcttgaaagag
aaacagactgcagaggacaacaaggaggtcagcatcattgacctcagccacaaaaagatg
atgaagaaacgcaataaaaagatttttgacaactggatgacaattcaagaactgttaacc
cacggcagaaaatctcccgatggaactcgagtgtacaactcgctactctccgtcacaact
gtataa
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integrated database retrieval system
