Nanorana parkeri (Xizang Plateau frog): 108788342
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Entry
108788342 CDS
T04897
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npr03036
]
108788342 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
npr04812
]
108788342 (CLASP1)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108788342 (CLASP1)
Cytoskeleton proteins [BR:
npr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108788342 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
HEAT_2
Sec7-like_HUS
Cnd1
Adaptin_N
HEAT_DAAF5
RTP1_C1
TTI1
MMS19_N
MMS19_C
ParcG
Dopey_N
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
108788342
NCBI-ProteinID:
XP_018413594
LinkDB
All DBs
Position
Unknown
AA seq
1545 aa
AA seq
DB search
MEQGMEYWFAQIQQKDVGKRLQVGPDLIECLSDKQKSMDLEQDQTLLDKMVDALATSWVN
SSNYKVALLGMDILSALIARLQDRFKNQICTVLPSLMDRLGDAKDSVRDQDQNLLLKIME
LSCSPQYVWDRMLGGFKHKNFRTREGVCLCLIATLNIYGANNLTLSKIVPHICNLLGDPN
SQVRDAAINCLVEIYKHVGERVRADLSKKGLPQSRLNVIFAKFDEVQKSGAMIQTSLDKN
FDDEDSVDGNRPSSASSTASSKAPPSARKPVAMGTARRPGTSTGATKPGAKEGAGGLDEE
DFIRGFEDVPTVQIYSSRDLEESLNKIREILSDDKHDWEQRIVALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSTKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLVPN
SAKIMASSGVVAVRLIIRHTHVPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIVARKCYWGFHSHFSREAEHLYHNLESSYQKALQSHF
KGSDSIVSLPQSDRSSSSSQESLNRPLTAKRSPPGSAASRVSAAPVKTAATPGSLQRSRS
DIDVNAAATSKSKAASSTATAPFIAAAALPPGSYASLGRIRTRRQSSGSNSSATSVQIDT
RGRSRAKIVSQSQRSRSANPASAGSRSNSPGKLLGSGYSSLATSAQRVPQVPSTEKRSKI
PRSQGCSRETSPSRLGLARSSRIPRPSMSQGCSRDTSSSFSRNSTPQASINNLVSCFIFL
LLDRYGMGLAGRQPSSMSAMRVLSSSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDA
SSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCAISNCSERKEGLMGLQNLLKSQRTLSR
VELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMGADL
LGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDP
TDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQD
GATKLLHNHLKNSSNSSVGSPSNTMGRTPSRHSSSRSSPLTSPTNCSHGGLSPSRLWDWS
ADGLPKHLPPPSHSIPTAPSRKAFRHSYSPSLLDYDTENLNSDEIYSSLRGVTEAIEKFS
FRSQEDLNEPVKRDGRKDDLVSREAGMASPVSDLRGGSDVVEGGRMALDNKTSLLNTQPP
RAFTGPRGREYSPYPYSDSINSYDKTALKEAVFDDDMDQLRDVPIDHSDLVADLLKELSN
HNERVEERKGALCELLKITREDNLGVWEEHFKTILLLLLETLGDKDHAIRALALRVLREI
LRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQT
ADYPINLAAIKMQTKVIERISKESLHQILQDIIPGLLQGYDNTESSVRKASVFCLVAIYS
VIGEELKPYLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggaatggaatactggtttgcccagatacagcagaaggatgtagggaaaagg
cttcaggtgggaccggacctgatagaatgcctgtcggataaacagaaatcgatggatcta
gaacaggaccagactctgctggataaaatggtggatgcgctggctacgtcctgggtgaat
tctagcaattacaaggtggcgttgctgggaatggatattttatcagctttaattgctcga
ttgcaagatcgcttcaaaaatcagatttgtacagtcctgcccagtctgatggatcgatta
ggtgatgcaaaagattcagtccgagaccaagatcagaacctgctgctgaagataatggag
ctgtcatgcagcccacagtatgtctgggatcggatgctgggaggcttcaagcacaagaat
ttccgcacccgggaaggggtctgtctctgccttatagcgactcttaacatatacggagca
aacaacctgactctgagcaagattgtacctcacatatgtaacctgctcggggaccccaac
agtcaggtgcgagatgcagcaataaattgcctggtggaaatctacaaacacgtgggagag
cgcgttcgtgccgacctcagcaagaaagggcttccccaatcccgattgaatgtcattttt
gccaaattcgacgaagtgcagaaatccggggccatgatccagacatcgctggataaaaac
tttgatgatgaagattcagttgatggaaacagaccttcatcagccagctctaccgcatcg
tccaaagcacctccctctgcgcgcaaaccggtagccatggggacagctcggagaccggga
acgtctacaggggccaccaagccaggagccaaggaaggtgccggaggtctagacgaggag
gacttcatcagagggtttgaagatgttccaaccgtgcagatctattccagtagagatctg
gaggaatctttgaataaaattcgggaaatactttcggatgataagcatgactgggagcag
aggatagttgcgcttaagaaaattcgttcgctcctcctggccggtgctgccgagtatgac
aattttttccagcacctgcggctgcttgatggggccttcaagctctcaactaaggatctg
cgttcccaggtggtcagagaagcttgcattaccctggggcatctctcatcagttttggga
aacaaatttgaccacggagcagaggcaatcatgcccacagtcttcaatcttgtcccgaac
agcgccaaaattatggccagttccggtgtggttgccgttcgcttaattatccgtcatact
catgtcccgaggctcataccaatcattacaagtaactgcacctccaagtctgtggcagtt
cgaaggcgctgctttgaattcttagatctgctcctacaagaatggcagactcattcactt
gagaggcacatatcagtgttagcggaaaccatcaagaaaggaatacacgacgctgattca
gaagcgaggatcgtcgcacgaaagtgttactggggattccacagccatttcagcagggag
gcggagcacttgtaccataacctggagtcgtcctatcagaaggccctgcagtcgcatttt
aagggctcggacagcatcgtctctctcccccaatctgaccgctcttcatccagctcacag
gagagcttaaaccgacctttaacagccaagaggagcccgcctggcagtgctgcatccaga
gtttctgcagcgccggtgaagactgcggccaccccgggctccttgcaacgctctcgcagt
gacattgatgtgaatgcggcagccacttccaagtccaaagcagcatcttccaccgctact
gcacctttcatcgctgctgctgccttacccccagggtcttacgcatcactaggtcggatc
cgcacaaggagacagagttccggaagtaacagcagcgccacgtcagtccaaatagacacc
cgcggtcgtagcagagccaaaattgtatcccagtcccagcgatccagatcagcgaatcca
gccagcgccggcagcagatccaactctcctgggaagttgctgggaagtgggtacagcagt
ctggcgaccagcgcccagagggtcccgcaggtaccgtccacggaaaagagaagcaagatt
cctcgtagtcagggctgcagccgagagaccagccccagcaggctaggactggcccggagc
agccgcattccccgacccagcatgagtcaggggtgcagccgcgacaccagtagttccttt
tccagaaactccaccccgcaagcttccattaataaccttgtatcctgctttatttttctt
ttgttagatcgctatggaatgggcctggcgggaagacaaccgtcctccatgagcgcaatg
agggtcctcagctctagtacagaccttgaagctgccgtggcagacgctctgaaaaagccc
gtgagaaggcgctatgagccgtacgggatgtattctgatgacgacgctaacagtgacgca
tctagcgcatgttcagaaaggtcttatggatcacggaacggggggattccgcactacctg
cgccagacagaggacgtggcggaggtcctcaatcattgcgctatttccaattgttcagag
aggaaggagggactgatgggactacaaaacctgctcaaaagtcagcggacgctcagccgc
gtggagctgaaaagattgtgcgagatattcactcggatgtttgctgatccgcacagcaag
cgtgtgttcagcatgttcctggaaaccctggtggatttcgtcatcattcacaaggacgac
ctgcaggactggttgttcattttactgacccaactcttgaagaaaatgggggccgacctg
ctgggttcggtgcaggccaaagtccagaaagcactcgacgtgacaagggattccttcccg
tttgatcagcagtttaacattttgatgcggttcatcgtggatcagactcagacgccgaat
ctcaaggtgaaagtcgccatcttaaagtacatcgagtcgctggcccggcagatggatcct
acagactttgtgaactccagcgagacgcggttagcggtctccaggatcatcacatggaca
accgaaccaaagagctcagatgtcaggaaggcggcacagatcgtcctgatctctttgttt
gagctgaacacgccggagttcaccatgttactgggtgctttgccgaaaacattccaggat
ggagcaaccaaactactccacaatcatctgaagaactccagcaacagcagcgtgggatcg
ccaagcaataccatgggccgaaccccttcccggcactcaagcagtaggtcaagtcctcta
acatctcccaccaactgttcccatggaggcctctccccaagccggctgtgggactggagt
gcagatgggctgcccaaacacctccctccgccatcacactccatccccactgcgccgtct
cgcaaggcgttcagacactcttactctccgagccttctagattacgacacggaaaatctg
aattctgatgaaatttatagttcgctccgcggcgtcaccgaagccattgagaaatttagc
ttccgcagccaagaggatctaaatgagcccgttaagcgagatggaaggaaggatgacttg
gtctcccgagaagccggaatggcatcccctgtcagcgatctccgcggaggatcagatgtt
gtggaaggaggacgaatggctctagacaacaaaacctcactgctgaacacacaaccgcct
cgcgcgtttaccggtccacgtggacgagagtacagcccttacccctactcagactctatc
aatagctatgacaagaccgcacttaaggaagcagtgtttgatgatgacatggaccagctg
cgtgatgttcctattgaccactctgacttggtggccgacctgctgaaagaactgtccaat
cacaatgagcgggtggaggaaaggaaaggtgccctctgtgaactgctaaagataactaga
gaagacaaccttggtgtttgggaggagcacttcaaaactattctccttcttctcctggag
actctcggagataaagatcatgctattcgagctctcgcattacgagtactccgagaaatc
ctgaggaaccagccagccaggtttaaaaattatgctgagttgacgatcatgaagactcta
gaggctcacaaggattcccataaagaggtcgtcagagctgcggaagaagcggcctccacc
ctagctagctccatacaccccgagcaatgcatcaaagttctctgtcccatcatccagact
gccgattaccctataaatctggctgccatcaagatgcaaactaaagtcatcgagaggatt
tccaaggagtctctgcatcagatcttgcaggatattattcccggtttgttacagggctac
gataataccgagagcagcgtccgcaaagcaagcgtcttctgtcttgtagcaatttattct
gtcattggagaggagttgaagccgtatcttgcgcagctcacaggcagcaagatgaaactt
ctaaatttgtacataaaaagagcgcagacgacgaacagcaacagcagctcctcatcggat
gtttccacgcacagttag
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integrated database retrieval system
