Nanorana parkeri (Xizang Plateau frog): 108788418
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Entry
108788418 CDS
T04897
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108788418 (DDX1)
03016 Transfer RNA biogenesis [BR:
npr03016
]
108788418 (DDX1)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108788418 (DDX1)
Spliceosome [BR:
npr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108788418 (DDX1)
Transfer RNA biogenesis [BR:
npr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
108788418 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
108788418
NCBI-ProteinID:
XP_018413682
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAYGEMGVMTEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFCIPV
IQIVYETLKDQQEGKKGKAAVKTGSTVLNKWQMNPYDRGSAFAIGSDGFCCQSREMKEWH
GCRSTRGVSKGKYYYEVSCHDQGLCRVGWSSLQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDVDNSLVKFSKNGKDLGHAFDIPPHLKNQAFFASCVLKNAELKF
NFGDEEFKFPPKDGFVALCKAPDGHAVKSQNAGSAQVSQAKTLPNAPKALIIEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAAKEQLAILESGVDIVVGTPGRIDDLISTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHQQIPQITPDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPINPKKDKVWERLGTKHVRTDGVHDKDNTRPGGS
SPEAMSEAIKILKGEYTVRAIKEHNMDQAIIFCRTKLDCDNMEQYFIQYGGGPDRKGHQF
SCVCLHSDRKPQERKQNLERFKKSEVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHVCSSRGKGCYNTRLKDDGGCTIWYNEMQLLS
EIEEHLTCTISHVEPDMKVPLDEFDGKVVYGKRRATGGGLYKGHVDILAPTVQELASLEK
EAQTSFLHLGYLPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtacggagagatgggtgtgatgacggagattgctcaggctgtggaggagatg
gactggctccttcctactgacatccaggccgagtctattccactgattctgggcggaggt
gatgtacttatggctgcagaaaccggaagtggtaagacaggggctttctgtatccccgtc
attcagattgtatatgaaaccttgaaagatcaacaggaaggcaagaaaggaaaggctgct
gttaagactggcagcacagtcctgaataagtggcagatgaatccatatgacagaggttct
gcctttgccattggttctgatggattttgttgtcagagcagagagatgaaggagtggcat
ggatgcaggtcaactcgcggagtcagcaaaggaaagtattactatgaagtgtcctgccat
gaccagggtttgtgtcgagttggttggtcttcacttcaggcgtcattagatcttggtacg
gacaagtttggctttgggtttggaggaactggaaagaagtctcacaacaagcagtttgat
aactatggggaggagtttacaatgcatgataccattggttgctacctggacgtcgacaat
agccttgtgaagttctctaagaatgggaaagacctcgggcatgcttttgatatcccccca
cacttgaagaaccaagcattctttgcatcatgcgttctgaagaatgccgagctgaaattt
aattttggagatgaggaattcaaattcccacctaaggacgggtttgttgctttgtgcaaa
gctccagatggtcacgcagtcaaatcccagaatgctggaagtgcccaagtgagtcaagca
aagactttacctaatgcacccaaagccctcattattgaaccatcccgggagctggcggag
cagactctgaataatgtcaagcagttcaagaaatacatagacaatcccaaactaagggag
ctcctgatcatcggtggagtagctgcaaaggagcagctggcaatactggagagtggagtt
gacattgtagtgggcactccgggaagaattgatgatctcatctcaacgggaaaactgaac
ctgtcacaagtgcgcttcctggtccttgatgaagctgatggcctcctctctcagggatac
tcagacttcatcaacagaattcatcaacaaatccctcagatcactcccgatgggaaaagg
ctgcaggtgatcgtgtgttcggccactcttcattcattcgatgtgaagaagctgtctgag
aaaatcatgcacttccccacctgggtggatctgaaaggagaagattctgtccctgaaacc
gttcaccatgttgtagtgccgatcaacccaaagaaggataaagtgtgggagcggctgggc
accaaacatgtccgaactgatggagtccatgacaaagataacaccagacccggaggaagc
tccccagaagccatgtcggaagccattaagatcctgaagggagagtacacagtccgtgcc
atcaaagaacacaacatggaccaagccatcatcttctgccggaccaagctggactgcgac
aacatggagcagtattttattcagtatggaggagggcctgacaggaaaggacatcagttc
tcatgtgtgtgtctgcacagtgaccggaagccacaggagagaaagcaaaacctggagcga
tttaagaaaagtgaagttcgattcctgatctgcacagatgtggctgccagaggtattgat
atccgtggagttccttacgttatcaatgtgacccttccggatgagaagcagaactatgtc
catcgtattgggagagttggccgagctgagagaatgggattggccatttctctggtggca
tcggaaaaagagaaggtttggtatcatgtgtgcagcagtcgtggtaagggatgttataat
accaggctgaaggatgatggcggctgtaccatatggtacaatgagatgcagctgctgtca
gagattgaggagcatctgacttgcaccatatcacacgtggagcctgacatgaaggtgcct
ctggatgaatttgatggaaaagtagtgtacgggaaacgcagagctactggtggtggactc
tataaaggacatgtagatatcttggcacctactgtacaggagctggcttctttggagaaa
gaggctcagacctccttcttacacctgggctatctgcccaaccaactcttcagagccttc
taa
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