Nanorana parkeri (Xizang Plateau frog): 108788496
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Entry
108788496 CDS
T04897
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108788496 (VPS13A)
Membrane trafficking [BR:
npr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108788496 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
WWE
DUF5764
Motif
Other DBs
NCBI-GeneID:
108788496
NCBI-ProteinID:
XP_018413755
LinkDB
All DBs
Position
Unknown
AA seq
3190 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGKLDLKIPWKNLYNQPVEAVLDGVYLLIVPIASIKYDAEKEEKQFLETKQRELQRIEE
AKQKVADQKKPKEEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDDITNSQCPLSFGVSLQ
NLSLQTSDKNWNPCLHDESAKLFYKIVRLDNLFAYWNVKSEMYYHRSYNEALGVLKYGVA
SNNIIPEGYNFVFRPISGRAKLRMNPRSEFDFSSPKIDLDVNLQDIAIEFNKPQYHSVME
LLESVDMMSRNLPYRKYRPDVPVHNNARTWWNYAITGILDVHVKPRLRMWSWKHIRKHRQ
QVKRYKEVYRTKITSKKPAQDVLCQAEEYEKTLDIFCITLGRQQAEVEASKAGLKIYRPG
AKDEDSNSNGWFGWMWGWSGENCNMDLLSEGLAELMSPEAKSNLYAAIGYSETAVDPTLP
KTYETVVLCVKLLSMSIQLREDKGKPELINLAITDLSTVLKQRPGGQALRFEAQIGTFEV
TGISQDKAVPCLLSSRNIVTDNDVSLLNLMFETNPLDERADQRLIVDSQPVEIIYDAKTI
NSLADFFRPPQDVHLEQLTSATLTKLEEFKDKTSTGLLYVIETQKVLDLKINLRASYILV
PQNGFYENTSNLLILDLGSLSMTSKSRSKLPQMKASQNSIEDIMSRAYESFDVQLSSMQL
LYSKHSEDWKKARKQKHSSQHILDPLDLRVDFSRAMVVTDSRMPKFKLFGELPLLSARIS
DQKLRGILELIDSIPKPESPPPSSASPQKLPIQKSPLLNTPQLVARRSVLMDIQSIIDSD
LESECDEFYDAPTSPDEDLPFFEVSSGSLSRSNSVKKKKLVQHETLKNMTEFQMRFELPV
VVLALCSLSEDAEKTVLQLEIQGFGTELNIRTFDMSANAFLKEIALKCPQYNDEEEKPVY
LLTTLDNATDDLLLMEYIKADINGPEFKTTYNNIEQLIKVNFSSLDVQLHTEALLSTMSF
LTNLLPQSENKEVEQLAQDTEEEKKEDQKKKISLKKSKYDDVINLYVYAELSCLRVFIRE
QKCNISEISIEGLDAKVTMKKKSTEVLAKLKNIAILDSDSGALYKKAVYIIGKEVFSFKM
VSFVGATEGAAYSNMNIVDSAITLTVGCIQVIFVNKFISAILAFVNNFQAAKEALADATV
HAAEKAASGVKELAQQSFRLALDINIKAPVVIIPQSSTSSDVLVADLGLITIKNAFSLVT
TKIKSNLPPVMDCMTVKLSNLKLYRTVFEKGSLLSEIELLQPLNMDITIERNLAAAWYSD
IPDIKIIGHLKPMRLMLGQEDLTVILRTLNENLGETSEKVDPEKNNAGGSSSGGNNTSPI
SSGTTVVTAAVVETYTPTKVRTTLKVDFQFDSLSLNLYSSSPNSPLMKAFERDSTLQLAE
FTLGLISAAVKMSSDGSMSAAVKLKNCMLDDKRQAIQKATPRMLEMKPGQEKRVMVDVFY
KQGREGTVMDVTVHDIYLCASMEFLLTVADIFLKAYEHSSAALKSSKQTSTDIKEAAPAQ
QVSRMEMNVVVKNPEFVFVADLSRADAPALVLTMQCELSIKNSPEQQHMSAAIRNLHMKA
CPFLPEKRRGKITTVLQPCDLFFLSDQSTGEPQKIELSIKSLMLKVSPVIINTVITITSA
LSTPSKESISEVTSPVPIDLWKEKNVKDLKLWFLEEEEKNNNKSGEANKLVLTGESLNLS
IESIIVTLEAGVGHRTLPMLLAKSSFKGNVKNWSTLINLYCQLELEVHYFNEMLGVWEPL
LEPLELERSDAFRPWSLEVKMKKKLMKQGCETDGEEENYKIPEYVTAVNIFSKDQLNVTL
SKCGIAMLGNLGQAFAEAASKTSEVFQKDQAPFVVKNYLGLPICVSPSDSFTPLNSDHGL
KSLELENGDCLNLDFVRTKSQTDQFSAMTSLSSKHFYIQLIPQNHSSTEKIPLTKVGRSL
YSVRHSDSGVERYIVCQIDTMEGAKCTTIRSPLQIRNHFSIAFQVYHEDTFLGTAEPQDD
FNIPLSSYRSTLCLKPMSGEYEKCEGIDFEDFLKNQGSLLATKCQSRKNNIDSLVVNIVP
VMDILVSSVCTDEKWDLPYVVHLWPSVILRNLLPYQMTFSLEGKEDGDVLIEDGCSAQIH
SAVIDQSKLKLRLLNYHDMNWEAIYAIKSKQQDIHFVTFRCVSDLDKTELDIAVHVTYTT
GQTIIAIHSPYWMVNKTGRMLQYKADDVHRKHPADHKKPLLFSFKPKNFVQNNKVQLMIT
DSDLSDPFSMDTVGAHGAVKCKSKQMDYQVGVSIYASSFNLTRIVTFTPFFMITNRSTYN
VSVTEENTVRVIKVPSGQCVPFWPDCMKNKLTVEVEGCQTPPKRINFDKQENCTLLHLDE
KLGGILVDVTPRDHSTVITFSDYFVGSAPFLIINDTKAEIIEFFQSSVNAQPDKLAPGKA
ALYAWEDPTSQRELSWKCGTATGKVIQTEDRVEYHRLENCIIYMVSFLEGLQRIVLFTED
ENVFKVTYDNEKAELAEQEVIISLSNLGISLVNNYSKQEVCYIGITSSDVVWETKKKSRW
KPLSMKQTEKLEAAYKEYSESAPTDIKIVELDSNAQVCLTPTFTEMKFVQPSTAPVRRSH
LPALKIEYSASAHQTSIRLQLYRIQIQNQIPGAIFPFVFYPIKPPKSVTLDSGPKPFTDV
SIVIRTAGHSEISRIKYFKVLIQEMDLRIDLGFLYALAELFTQSEDVSTDQEVVLFKKDV
ESLQTELSTVSSINTSQVSLYEHFHISPIKLHLSFSLSTGGDDGNKELRDKELIPVQSLN
LLLKSIGATLTDVQDVVFKLAFYEVENQLYTTQELQWEVVRHYSRQAIKQMYVLVLGLDV
LGNPFGLFRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGIAGAASRIT
SAMAKGVAAITMDEEYQQKRREAMNKQPSGIREGLTRGGKGLVSGFVSGITGIVTKPIKG
AQKEGAAGFFKGVGKGLVGAITRPTGGIIDMASSTFQGIKRATDTSDDVESLRPPRFLHE
DGVIRPYRMREGAGSQMLQKIENGRFAKCKYFAHAMVNNTDLLMIMKSGVLFVTKGTFGQ
LTCEWQYSFDEFTKEPIIVSGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDAKWILSKL
DEVRDLQPKP
NT seq
9573 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtctgtggtggtggacgtcctgaaccgctttctcggggactatgtggtg
aatttggacagctctcagctgaagttgggcatatggggaggtgctgtagcactgaagaat
cttgagattaaagaaaacgcattgagtcaactggatgtgccttttaaggtgaaagctgga
catattggaaaactcgatcttaaaattccttggaaaaatctttataaccagccagtagaa
gctgttttagatggtgtttacttattaatagtgcctatcgctagtatcaaatatgatgca
gaaaaagaggaaaaacaatttctggaaacaaagcaacgggagcttcaacgcattgaagag
gccaaacagaaagtggcggaccagaaaaaaccaaaggaagaaaaacaggatacatttgta
gagaaattagtaactcaggttatcaagaatcttcaagtgaagatctccaatattcatatc
cgctatgaagatgatatcacaaattctcagtgccccctttcatttggcgtttcacttcaa
aacctcagtttgcagacatctgataaaaattggaatccatgtcttcatgatgaatctgcc
aagctgttttacaagattgtgcgcctggacaatctgtttgcctattggaatgtaaaatct
gagatgtattaccatcgaagttacaatgaagctttgggggttttgaaatatggagttgct
tccaacaacataatccctgaaggctataattttgttttccgtccaatctcagggagagca
aaactccgtatgaatcctcgttcagagtttgacttctcttcaccaaaaattgatcttgat
gtcaatcttcaggacatagcaattgagtttaataaacctcagtaccatagtgtaatggag
cttcttgaatctgttgacatgatgtccagaaatcttccatatagaaagtacagaccagat
gttcctgttcataataacgctagaacatggtggaattatgcaataactggtatccttgat
gtccacgtaaagccacgcctccgtatgtggtcctggaaacatattcgaaagcatcgacag
caagtgaagaggtacaaagaagtgtacagaaccaagataacatcaaagaaaccagcacaa
gatgttctgtgccaggcagaagagtatgaaaaaaccctggatatattttgtattaccctt
ggaagacaacaagcagaagtggaggcaagcaaagctggccttaaaatatacaggccagga
gcaaaagatgaggacagcaactccaatggatggtttggatggatgtggggctggtctgga
gagaattgtaatatggatttgctttctgaaggtctggcagagctgatgtcacctgaagcg
aaatcaaatttgtatgcagcaattggatacagtgaaacggcagttgacccaactctacca
aaaacatatgaaacagtggttttatgtgtaaagttgttaagcatgtcaattcagttgcga
gaagataagggaaagcccgaattgattaatctggctataactgatctgagcacagtgtta
aaacagcgaccaggaggacaagcacttagatttgaagcccagattggtacatttgaggta
actggcatttcacaagacaaggccgttccctgtctgctgtcttctcgaaatattgtaaca
gacaatgacgtttcattgttgaacctcatgtttgaaacaaatcccctggatgagcgtgca
gatcaaaggcttatagtggattctcagcctgtagaaataatatatgatgctaaaaccata
aacagtttagcagattttttccggcctccacaagacgtccatcttgaacaactgacctca
gccactttaacaaaactagaagaatttaaagataaaacgtcaacagggctactgtacgtt
atagagacacagaaggttcttgacttgaaaatcaacctccgggcttcatacatccttgtt
ccccaaaatggattttatgaaaacacatctaacttgcttattttggatttaggtagttta
tcgatgaccagcaaaagtcgttcgaaactcccccagatgaaagcaagtcaaaacagcatt
gaagatatcatgtcccgggcctatgagagttttgatgtgcagctcagcagtatgcagctc
ctctacagcaagcactctgaagactggaagaaggctcgcaaacagaaacattcttctcaa
catatattggacccattggatctcagagttgattttagccgagccatggtagtgactgat
tcaagaatgccaaaatttaagttatttggggagttgcctttactttctgctcgtatttct
gaccaaaagctcagaggtatacttgaactgattgacagcataccaaaaccagaaagtcct
ccgccatcatccgcctctccccaaaaacttccaatccaaaaatcccctcttctgaacaca
cctcagcttgtagcaagacgttccgttctaatggatatccagtcaattattgattctgat
ttagagtcagaatgtgatgagttttatgatgctcccaccagcccagatgaagacttgcct
ttctttgaggtctccagtggctcattgtctagatctaatagcgtgaagaagaagaagtta
gtgcagcatgaaacactaaaaaacatgacagaatttcagatgagatttgagctaccagtt
gtggtactggctttgtgtagcctgtctgaagatgcagagaagactgtactgcagctggag
attcagggttttggcacagaactcaatattcgaacgtttgatatgtcagcaaatgcattt
ctgaaggagatcgccttgaaatgtccccaatacaacgatgaggaagaaaagccagtttac
cttctcacaacactggataatgccaccgatgatctgttattaatggagtacataaaggca
gacataaatggaccagaattcaagactacttataacaacattgaacaattgataaaggtg
aacttttcatcattggatgttcagctccacactgaagccttgctgagtacaatgagcttc
ctcactaacctcttaccacaatctgaaaacaaggaagtagaacaacttgctcaagataca
gaggaagagaaaaaagaggatcaaaaaaagaaaatttcattgaagaaatcaaaatatgat
gatgttattaacctttatgtatatgctgaattgtcctgccttcgggtttttatccgtgaa
cagaagtgtaatatctcagaaataagcattgaagggcttgatgctaaagtgacaatgaag
aagaagtcaacagaagttttggcaaaactgaaaaacattgcaatcctagattctgacagc
ggtgccctatataaaaaggctgtttacatcattggaaaggaagtctttagttttaagatg
gtctcttttgttggtgctactgaaggtgctgcctacagcaatatgaacatagtggatagt
gcaatcaccctaacagttggatgcatacaagtcatttttgtcaacaaatttatttcagca
atactggcctttgtgaataactttcaagcagcaaaggaggcgttagcagatgcaacggta
catgctgcagaaaaagcagcaagcggtgtgaaagagctggctcagcagagttttcgacta
gccttggacatcaacattaaagcccctgtagtgattataccacagtcttctacatcctca
gatgttctggtggcagatttaggtctcatcacaattaagaacgcattctctttggtaaca
accaaaatcaaaagtaatcttcctccagtgatggactgtatgacagtcaaactaagtaac
ctgaagttatatagaacagtttttgaaaagggttcattgctctcagaaatagaactccta
cagcctctaaatatggacatcacaattgagcgcaatttggcagctgcctggtacagtgat
attcctgatattaaaatcattggccatctcaaacccatgagacttatgctaggacaagag
gacttgactgttattctcaggacattgaatgagaatcttggagaaacatctgaaaaagtt
gacccagagaaaaataatgcaggcggatctagcagtggtgggaacaatacatcccccatc
tcttcaggaacaactgtggtgacagcagctgtagttgaaacatacacacctactaaagtt
aggactacactgaaggtggattttcagtttgactccctctccttgaatttatatagttcc
agtccaaactcccctctgatgaaggcctttgaaagagacagcacactacaacttgctgag
ttcacattgggtttgatttcagctgcagtgaaaatgtcatctgatgggtcaatgagcgct
gctgttaaactcaaaaattgtatgttggatgacaagagacaagccatccagaaagcaact
ccacgaatgctggaaatgaaacctggacaggagaaacgtgttatggtagatgtcttctat
aaacaaggcagagaaggcacagtcatggatgtgactgtccatgacatttatttatgtgcc
agcatggagtttctgctcaccgtcgcagacatatttcttaaagcctatgagcatagttct
gctgcattgaagagcagcaagcagacatcaacagacattaaagaagcagctcctgcacaa
caggtttctagaatggaaatgaatgtagtggttaagaatccagaatttgtttttgtggcc
gatttgtcaagagcagatgccccagcactagtccttacaatgcagtgtgaactgtctatt
aaaaacagccctgaacagcagcatatgtcagctgcgataaggaatctgcacatgaaggcc
tgtcccttcttgccagaaaaaagaagggggaagatcactacggttctgcagccatgtgat
ctttttttcctaagtgatcaatctactggggagccccagaagattgaactgtcaataaaa
tcactcatgttaaaggtctctccagtcattataaacaccgtgatcacaatcacttcagcc
ctttcgactcccagtaaagaatcaataagtgaagtgactagtccagttccaatagacctg
tggaaggaaaagaatgtgaaagatttaaaattgtggtttctggaagaagaggaaaaaaat
aacaacaaatctggggaagcaaacaagttggttctgacaggagagagcttaaacctgagc
attgaatcaatcattgtcactctagaagctggtgttggtcacaggaccctgcccatgctc
ttagccaagtcttcatttaaagggaatgtgaagaactggagcacacttataaacctttac
tgtcaactagagctagaggtgcattattttaatgaaatgctaggtgtctgggagccactc
ttggaacctttggaattggaaagaagtgatgccttcagaccctggagcctcgaagttaag
atgaaaaagaagttaatgaaacagggttgtgaaacagatggagaagaagagaattacaag
atcccagaatatgttacagcagtcaacatattttccaaagaccagctaaatgtcacactt
tctaaatgtggtatagcaatgcttggcaacctgggacaggcatttgctgaagccgccagc
aaaacatcggaagtcttccagaaagaccaagctccctttgtagtaaaaaattatctgggt
cttccaatttgtgtcagtcccagtgattcattcactcctttaaacagtgaccatggatta
aagagtctagaactggaaaatggggattgtcttaatttggattttgtccgcacaaagagc
cagactgatcagttctctgccatgaccagcctcagcagcaaacatttctacatccaactc
atccctcagaatcactcttctactgaaaaaatccccttaactaaagtgggccgaagtctt
tacagtgtgagacattcagattctggtgttgagcgatatattgtttgccagattgatact
atggaaggagccaaatgcacaacaataaggtccccattacagattagaaatcatttttct
attgcatttcaagtttaccatgaagatacttttcttgggactgctgaaccacaagatgat
tttaacatcccattgtcatcttataggtcaacgctgtgcttgaagccaatgtcaggtgaa
tatgaaaaatgtgagggaattgactttgaagatttcttgaaaaaccaaggctcactacta
gcaacaaaatgccaatctcgtaaaaataacattgactcccttgttgtgaacattgtgcca
gtgatggatatcctggtatcctcggtgtgtactgatgagaagtgggaccttccgtatgtt
gttcatctgtggcccagtgttatccttcgcaacttgcttccttatcaaatgacattttca
ctggagggtaaagaagatggggacgtcctgatagaagatggatgttccgcccagatacac
agtgctgtaatagaccagtccaaattgaagctacgtttattgaattaccacgacatgaac
tgggaagccatatatgcaatcaagagcaagcagcaggatattcactttgtaacattccgc
tgtgtgtcggatctggacaaaacagaactggacattgctgtccatgtcacttacactact
gggcaaaccatcattgcaattcacagtccatactggatggttaacaagactggaaggatg
ctacaatacaaggctgatgacgtccaccgaaaacatcctgctgaccacaagaagcccctt
ctattctctttcaagccaaagaactttgtccaaaataataaggtgcagctcatgataaca
gacagtgacttgtcagaccccttctccatggatacagtaggtgctcatggtgctgtgaag
tgcaagagcaaacagatggactaccaagttggtgtatctatttatgccagcagttttaat
ctcaccagaattgtcactttcacaccattttttatgatcacaaatagaagtacttataac
gtgagtgtaactgaggaaaatacagtgagagtaattaaagttccctctggacagtgtgta
ccattttggcctgattgtatgaaaaataaactgaccgttgaggttgaaggctgccagact
cctccaaagagaataaactttgataaacaggagaactgtactctgcttcatcttgatgaa
aagcttggaggcatattggtggatgtcaccccaagagaccattccactgtcatcactttt
tcggactactttgtagggtcagctccattccttatcattaatgatacaaaggcagagatc
attgaatttttccaaagctctgtcaatgcacaaccagacaaattagcacctggaaaagcc
gcactatatgcctgggaagaccctactagtcaaagagaattgtcttggaaatgtggaaca
gccacaggaaaagtcattcagacagaggaccgagttgaataccacagactggagaactgt
attatctacatggtctctttcctggaaggtttgcaacggattgtgcttttcacggaagac
gaaaatgttttcaaagtgacatatgacaatgaaaaagcagaattagcagagcaggaagtc
ataatatcattatcaaatcttggcatttccctagtaaataactattccaagcaagaagta
tgctacattggcatcaccagttcagatgtggtttgggagacaaagaagaaatccagatgg
aagccactcagtatgaagcaaacagaaaagttagaagcagcctacaaggaatacagcgag
tctgcccccacagacattaaaattgttgagttggattccaatgcccaggtatgcttaaca
cctactttcactgagatgaaatttgtacagccatcaacagcaccagtgagaagaagccac
ttgccagctttgaaaatagaatactcagcctctgctcatcagacttccatcagactacag
ctctacagaatacaaatacaaaatcagattcctggagccatatttcctttcgtattttac
ccaattaaaccacccaagtctgtgaccttggactcaggaccaaaacccttcactgatgtg
agcattgtgatcagaacagccggacattctgaaatatcacggataaagtacttcaaggtc
ttaattcaagaaatggatctgcgaatagatctgggttttttgtatgccttggcagagctt
tttactcaaagtgaagatgtgtctacggaccaggaggttgtgctcttcaaaaaagatgtg
gagtctctccaaactgaattgagcactgtgtcttcaattaatacctcccaagtcagcttg
tatgagcattttcatatatctcctataaagttacatttaagcttctcccttagtactggt
ggagatgatgggaataaagagcttcgagacaaagaacttataccagtgcaatctttaaac
ctcctcctgaagagtattggtgctaccctgactgatgtgcaggatgttgtgttcaaactg
gctttttatgaggttgagaaccaactttatacaacgcaagaactgcagtgggaagttgta
aggcattattcacgacaagccattaaacaaatgtacgttcttgttcttggcctcgatgtg
ctggggaacccctttggtttgtttcgagatctttctgaaggggtggaggctttcttctat
gagccttatcagggagctattcaaggtcctgaagaatttgttgaaggaatggcactggga
gtaaaggcacttgttggtggagcagttgggggcatagctggagctgcatcccgaatcaca
agtgctatggccaaaggtgtagcagccattactatggatgaagaataccagcaaaagagg
agagaagccatgaacaaacagccaagtggcatcagggaaggtcttacacgtggaggcaaa
ggccttgtgtctggctttgtcagtggtataaccgggatagtaacaaagccaattaaaggt
gcccaaaaggaaggagcagcaggattttttaaaggtgtcggcaaaggattagtgggggct
ataaccaggccaacaggaggtataatagatatggccagcagcacatttcagggcatcaag
agagctacagacacttctgatgatgtagagagtctacgccctcctaggtttttacacgaa
gatggtgttataaggccatataggatgagagaaggtgcaggaagccaaatgctacagaaa
attgaaaatggacgatttgccaaatgtaaatattttgcccatgcaatggtcaataacact
gatttacttatgatcatgaagagtggtgttttgtttgttaccaaaggaacatttggacag
cttacttgtgagtggcagtacagttttgatgaatttacgaaagagccaatcattgtgagt
ggtagaagactacgcattgaagcaaaagaacgagtgaaatctgttttccatgccaaggag
tttggaaaaatcattaattttaagactccggaagatgccaagtggattctgtctaaattg
gacgaagtccgagatcttcaaccaaagccatga
DBGET
integrated database retrieval system
