Nanorana parkeri (Xizang Plateau frog): 108788694
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Entry
108788694 CDS
T04897
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108788694 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108788694 (CPSF2)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108788694 (CPSF2)
U7-dependent histone pre-mRNA processing factors
108788694 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Prion
ODP
Motif
Other DBs
NCBI-GeneID:
108788694
NCBI-ProteinID:
XP_018414027
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGAQEESALCYLLQVDEFRFLLDCGWDENFSMEIIESIKKYVHQVDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFNLYTLDDVD
SAFDKIQQLKFSQIVHLKGKGHGLSIAPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMISRPSLLITDCFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLTLCHGFADLARVPSPKVVLASQPDLECGFSRELFIQWCQDPKNSVILTYRTS
PGTLSRYLIDNPNEKVIDMELRKRVKLEGKDLEEYLEKEKIKKEAAKKLEQSKEVDIDSS
DESDVEEDIDQPMAHKTKHDLMMKNEGNRKGSFFKQAKKSYPMFPVTEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISTTEPMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASHDLAESCRAFGGKDIKVYTPKLHETVDGT
SETHIYQVRLKDSLVSSLKFCKAKDTELAWIDGALDMRVSKVDTGVILEEGELKDEGEDS
EMQVDVPSVDATTIAQQKVIKSLFGDDEKEFSEESEVIPTLEPLTSNEVPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVCRTETGRIGLEGCICEDFYKIRELLYSQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatcattaagctgacaacgctctccggagcgcaggaggagtcggccctctgc
tacttgctgcaggtggacgaatttcgcttcctcctcgactgcggctgggatgagaatttt
tctatggagatcatcgaatccatcaaaaagtatgtccatcaggtggatgctgtcctcctt
tctcacccagatccgctgcaccttggagctctcccctacgccgtgggcaagctaggatta
aactgcgctatatatgctacgatccctgtgtataagatggggcagatgttcatgtatgac
ttgtaccagtctcggcacaacacagaagattttaacttgtacactctagatgacgtggat
tcagcgtttgataagatacagcagctgaaattctcacagatcgtccacttgaaaggaaaa
ggtcacggtttatccatcgccccattgccagctggccacatgattggaggaaccatatgg
aagattgtgaaggacggagaggaggagattgtgtacgctgtagatttcaaccacaagagg
gagatacatttaaatggctgctcactggaaatgatcagccgtccgtctctgctcatcaca
gactgttttaatgcaacttacgtccagccgcggagaaaacaaagagatgaacagctacta
acaaacgtcctggagacccttcgaggtgatggcaatgtattaatcgctgtggacactgct
ggaagggtgctggaactggcacaactgctcgatcagatttggaggaccaaagatgctgga
ctcggagtatactccctggcacttctaaataatgtgagctacaacgtggtggagttttcc
aagtctcaggtggagtggatgagcgataagctgatgagatgtttcgaagacaagaggaac
aatccctttcagttccgacatctcaccctgtgtcacggcttcgcagacctcgcccgtgtc
cccagtccgaaagtggtgctggccagccagcctgacctggaatgtggcttctccagagag
ctgttcatccagtggtgtcaggatcctaaaaattccgtaattctcacctaccggacctcc
cctggaaccctcagccgctatctgatcgataaccccaacgagaaggtcatagatatggag
cttaggaaacgtgtgaagcttgaaggaaaggacctggaggaatatctagagaaagagaag
ataaagaaagaagctgccaagaagctggaacagtccaaagaggtagacattgactccagc
gatgaaagcgacgtagaagaggatatcgaccagccgatggctcacaagactaaacatgac
ctgatgatgaagaacgaaggcaaccgcaagggctccttcttcaagcaggccaaaaagagt
taccctatgttccccgtcaccgaggagcggatcaaatgggatgaatacggggaaatcata
aagcctgaagacttcctggtcccagagctccaagcgaccgaggaggagaagaacaagttg
gagtctggcttgacaaatggggaagaaccaatggaccaggacctgtcggatgtccccaca
aagtgcatctctacaacagagccaatggagataaaggccagagtcacctacatcgactat
gagggacggtctgatggcgactccatcaagaagatcattaatcagatgaaaccccgacag
ctgataattgtgcacggaccccctgaagctagccacgatctagcagaatcctgcagagct
ttcggaggcaaagacatcaaagtttacaccccaaaacttcacgagactgtggatggcacc
agtgaaactcacatttaccaggtcaggttaaaagactccctggtcagctctctcaagttc
tgcaaagctaaagacacagagctcgcctggatagatggcgcgctggacatgcgggtgtcc
aaggtcgacaccggggtcatcttggaggaaggagagttgaaagacgaaggagaggacagc
gaaatgcaagtggacgttccatcagtggatgccaccaccatcgctcaacagaaggttata
aagagcctgtttggagacgacgagaaagagttttctgaggaaagcgaagtcatcccgacg
ttggagcccttgacaagtaacgaggttcccggacatcagtctgtgttcatgaatgaaccg
agattatcagacttcaagcaggtcctgctccgggaaggaatacaggcggaatttgttgga
ggcgtccttgtgtgtaacaacttggtggctgtttgcaggacggagacgggacgcatcggc
ttagaggggtgcatctgtgaggacttttataaaatccgggagctcttgtattcccagtac
gccattgtttga
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integrated database retrieval system
