Nanorana parkeri (Xizang Plateau frog): 108788714
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Entry
108788714 CDS
T04897
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108788714 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108788714 (CNOT4)
03019 Messenger RNA biogenesis [BR:
npr03019
]
108788714 (CNOT4)
04121 Ubiquitin system [BR:
npr04121
]
108788714 (CNOT4)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108788714 (CNOT4)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108788714 (CNOT4)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108788714 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108788714 (CNOT4)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108788714 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-CCCH_2
zf-UDP
zf-RING_2
Rtf2
zf-C3HC4_2
Nup35_RRM_2
Torus
DZR_2
Motif
Other DBs
NCBI-GeneID:
108788714
NCBI-ProteinID:
XP_018414054
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSRSPDVKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTPLQRYDVPNSNIKDSWPSLQCSSRSANGLTLEH
GKSPPLLDNGLDTDHLTPDGPDSDFGLFWDTAEHNVSKFGRVIEDDTRYVDLT
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcagccctgacgtgaaggaagatcccgtggagtgccctctttgtatggagcct
ttggagatagatgacatcaactttttcccttgcacatgtggatatcaaatatgccgcttt
tgttggcatcgtatacgcacagacgagaacgggctctgtcccgcatgcagaaagccatat
ccagaagaccccgctgtctacaaacctctctcccaagaagagctgcagaggataaagaac
gaaaagaagcagaaacagaacgagcgcaaacagaaaatatcagaaaaccgcaaacatttg
gccagtgtgcgtgtggttcaaaaaaatctagttttcgtagtgggcctttcacaacgcctc
gcagacccagaggttttaaaacgaccagaatattttggcaaatttggtaaaatacacaaa
gtggtcatcaacaacagcacatcctatgctggctcacagggtccaagcgctagcgcatat
gtaacgtacatacggtcagaagatgcacttcgagctatacagtgtgtaaacaatgtggta
gtagatggaagaacacttaaggcatctttaggtacaacaaaatactgcagttacttctta
aaaaatatgcagtgtccaaagccagactgtatgtatctacacgaattgggggacgaggcg
gccagtttcacaaaagaagaaatgcaggcgggtaaacatcaagaatatgagcagaagttg
cttcaggaactctacaaacttaaccccaacttcttacagttgtctacgggtacagttgac
aagaacaaaaacaaagtgacacccctgcagaggtacgatgtacccaacagtaatatcaaa
gattcctggccgtcattacagtgctcaagcagatcagccaacggtttaacactggaacat
ggaaagtcgcctcctttattagacaatggcttagataccgaccatttgactccagacggt
cccgactcagactttgggctgttttgggataccgctgagcataatgtttccaaatttggc
agggtcatagaggacgacacaaggtatgtagatttgacttag
DBGET
integrated database retrieval system
