Nanorana parkeri (Xizang Plateau frog): 108788829
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Entry
108788829 CDS
T04897
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npr04131
]
108788829 (MYOF)
Membrane trafficking [BR:
npr04131
]
Endosome - Lysosome transport
Others
Ferlins
108788829 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
CAF20
Motif
Other DBs
NCBI-GeneID:
108788829
NCBI-ProteinID:
XP_018414191
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MLKVLVEAAANIPKTKLGKPDPIVTITFRGEKKKTKAINSELNPVWKELLEFDLKGIPLD
YSATLDVIVKDFETIGKDKFIGSTVLSLKDFAAGQSRSLPFKGVALMSEKGQAIGSTIDL
MVSYEAPASPTSNPSDPGGTHVQPDGDNEDEEDGDVVDSGFNPSMPGVPGQAENQIARRL
TKGKKTRRLLSNKPQDFQIRVRVIEGRQLSGNNIKPVVKASVGGQTHRTRIKRGNNPYFD
ELFFYNVNMAPSELFDDSVVLRLYNSGSIRADSLIGEFKLDIGFIYDEPSHAVMRKWVLL
HDPEDMSSGAKGYLKVSMFVIGTGDEPPVEKRDKESDADDIESNLLLPPGVALRWVTFLL
KIYRAEDIPQMDDAFAQSVKELFGADSDKKNLVDPFVEVSFAGKKVCTKIIEKNANPEWN
QAVHLQIKFPSVCENIKLTVFDWDRLTKNDAVGTSILSLSKIAASGGELEDCDTTGVGSS
ALEGMSEKETGFLPTFGPCYVNLYGSPREFTGFPDPFDDLNYGKGEGVSYRGRLLVELVT
KLDGTPGKKLEDIPSDDVLVVEKYQRRRKFSLCAVFHAASMLQDIGEAIQFEVSIGNYGN
KFDSTCKPLASTTQYSRAVFDGNLYYYLPWSATKPVVTMTCNWEDISHRLDVVNILLAMT
ERLQSNIATLKSAIQAKVPDTRLAEIWLRLIDQLIEDTMKPFPSLEGKSNVTMLDIQLHK
LRQMSLKMIGEAAVKMRAEATDVKATLVEIEDWLERLNQISEEPQNSMPDVVIWMIRAEK
RLACARIPAHQVLFSTASDEACGKYCGKTQTIFLQYPMDKNQGVKLPAQVRVNIWLGLSA
EEKKFNSYSEGSFSVCAEMYENQALMFGKWGTTGLLKRHKFSDVTGTIKLKQESFLPPKG
WQWEDDWAVDPERSLLTEADAGHSEFTDEVYQNESRYPGGEWKQPEVPYTDANGEKSPSP
GEFECPQGWMWEDDAWSFDINRAVDEKGWEYGITIPPDPKPKSWVAAEKMYHTHRRRRLV
RKRKKDPNVTASKKATLSQEDQDGWEYAALIGWKFHLKQRSSDAIRRRRWRRKMAPSESL
GASAIFKLEGALGADMSSEEEDKKDKEPAANIFGANTPIVSCIFDRAFTYHLRCYLYQAR
TLIALDKDSFSDPYAHVSFLHRSKTTETIHCTLNPTWDQTLIFNEVEIYGDPQSVAQNPP
NVVIEIFDSDQVGKDEFLGRSLCPPLVKLTPVDLTPKLLWYPVMNAGKHCGDVLVAAELI
LRDKDGSNLPLLPSQRAPKLYMVPQGIRPVVQLTAIEILAWGLRNMKSYQMASVTSPSLI
VECGGEIIQTAMIKNLKKTPNFPSSVLFMKVLLPKEEMYVPPVIIKVIDHRPFGRKPVVG
QCTIDLLEQFRCDPYITKFDDAAGLKVALLSSAPPRDVIIDVEDTKPLLATQLQEKEEEI
VDWWSKYYSSIGEHEKCGQYLQKGYDTLKVYNTELEDVPEFSGLTDFCETFKLYRGKADE
SDDPSVVGEFKGSFRIYPLSDDPGVPSPPRQFRELPDSGPQECIVRIYIIKGIDLQPKDS
NGLCDPYVKITLSKKVIEDRDNYVPNTLNPVFGRMYELSCFLPQEKDLKISVYDYDTVTR
DEKVGETIIDLENRFLSRFGSHCGLQQTYCVTGINHWRDQLKPTQILQNLARLKGVPAAE
FSESGNKVRFSGREYLLDTLEANKIIHQHLGPAKERLALYVLRSQGLVPEHVETRTLFST
FQPNLPQGKLEMWVDVFPKSLGPPGPPFNITPRKAKSYILRVIVWNTKDVLLDEKSITGE
EMSDIYVKGWIPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFEYLPAEQLCIISKKEHFW
SLDKTEFKLPPKLILQIWDNDKFSLDDYLGFVELDLHRTIIPSKSSDKCNLEMTDLAKPS
KVASLFEQKSMKGWWPCYAEKDGKRILAGKLELTLEVLNEKEAEERPAGKGRDEPNMNPK
LDPPNRPDTSFLWFTNPCKTMKFIVWRRFKWIFIGIIVLLFVLLFLGVFFYSLPGYVAMK
IVKPGS
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggtcctggtggaggcagccgccaatattccgaagactaaacttggcaagccg
gaccccatagtcaccatcaccttcagaggggagaaaaagaaaactaaagctataaacagt
gaactcaacccagtatggaaagagcttttagagtttgatctgaagggaatacccctggac
tactccgcgacattggatgtcatcgtcaaagactttgaaacaatcggaaaagacaaattc
attggaagtacagttttatctcttaaagactttgcagcagggcagagccgatcgcttcca
tttaaaggagtagctctaatgagtgagaaaggacaagccattggttctactattgatttg
atggtgtcctatgaggcacctgcatcccctacaagtaatccaagtgatcctggaggaaca
catgtacaaccagacggagataatgaagacgaggaggatggagatgttgtcgactcagga
tttaacccatctatgccaggtgttcctggtcaggcagaaaaccaaattgctcgacgtctc
accaaaggaaagaagactaggaggcttctttcaaacaaacctcaagacttccagatccgt
gttcgggtgattgaaggtcgtcaactgtctggtaacaacataaaaccggttgtgaaagcc
agcgtcggtggacagacccacaggacaagaatcaaaagagggaacaacccatattttgat
gagctctttttctacaacgtgaatatggcaccatctgaactgtttgatgattccgtagtt
ctccgtttgtataactctgggtctattcgagctgacagtttaataggagaattcaagctt
gacattgggtttatatatgatgaaccaagtcatgcagtcatgaggaagtgggttcttctc
catgatcctgaagacatgagctctggggcaaagggatatcttaaagtcagcatgtttgtc
atcggcactggtgatgagcctcctgttgaaaagagagacaaggaaagtgacgctgatgat
atagaaagtaatctcctccttcctcctggtgtagcactgagatgggtcaccttccttctg
aaaatctacagagctgaggacattccacaaatggatgatgcttttgcacagtcagtgaag
gaactttttggagcagactctgacaagaaaaatctagttgatccatttgtagaagtgtca
tttgctggaaaaaaggtctgtactaaaataatagagaaaaatgctaatccagagtggaac
caagctgtccatcttcaaataaagtttccctcagtgtgtgaaaatataaagctaacagtt
tttgactgggacagactcacaaaaaatgatgctgttggaacgagtattttgagcttgtcg
aaaattgcagcttctggtggggaattggaagactgtgacacaacgggagttgggtcttca
gcattggaaggaatgagtgaaaaggagactgggtttttacccacctttggtccttgttat
gtgaatctctacgggagtccaagagaatttactgggttccctgacccttttgacgatctc
aactatggcaagggagaaggtgtatcttaccgaggaagactccttgtagagctggtaacc
aagcttgatggcactcctggtaaaaagttggaggatatccccagtgatgatgttttggtt
gttgagaaatatcagcgccgccggaagtttagcttgtgtgctgtcttccatgccgcctcc
atgctacaagatatcggtgaagccatacaattcgaagtcagcattggaaactacggcaac
aaatttgatagcacttgtaaacccctggcatcaacaactcagtacagccgcgcagtattt
gatggtaacctctattactatctcccatggtctgccactaaacctgtagtaacgatgaca
tgtaactgggaagatattagtcatcgtctagatgttgtcaacattttgctggctatgaca
gaacgtctgcaatccaacattgccaccttgaaatcggcaatccaggctaaggttcctgat
acccggctggcagagatatggctaagattaattgatcagctgatagaagacactatgaaa
ccctttccctctctggaagggaaatctaatgtcacaatgctggacattcagctacataag
ctcagacagatgtctctaaagatgatcggggaggccgcagtcaagatgagggccgaagcc
actgatgtaaaagcaacacttgtagagatagaggactggctggagagactgaatcagata
tctgaggagccacaaaacagtatgccggatgtggtcatctggatgatcagagcggagaag
cggctggcttgtgctcgcatcccggcccaccaagtcctcttctccaccgccagtgatgaa
gcctgtggaaaatactgcggaaagacccagaccatcttcctacagtacccgatggataaa
aaccagggtgtgaagcttcctgcccaggtgagagtcaacatttggctggggctgtccgca
gaggagaagaaatttaacagctattctgaggggtctttcagtgtgtgtgcagagatgtat
gagaaccaagctctgatgttcggcaaatggggaaccacaggtctactaaagcgtcacaaa
ttttctgatgtcactggaacaatcaagctcaagcaagaaagttttcttccgcctaagggc
tggcagtgggaggatgactgggctgtggaccctgagaggagcttactgacagaagcagac
gccggtcacagcgagttcacagatgaggtatatcagaatgagagtcgctatcctggtggt
gaatggaaacaacctgaggtgccgtacacagatgctaatggggagaagagcccgtctcca
ggggagtttgaatgtccacaaggatggatgtgggaggatgatgcctggagctttgatatt
aacagagctgtggatgagaaaggttgggaatatggcatcaccattcccccagaccccaaa
cccaagtcttgggtggctgcagagaaaatgtaccacactcacaggagacggaggctggtg
aggaagaggaaaaaggaccctaatgtcaccgcaagcaaaaaggcaaccctttctcaggag
gatcaggatggctgggaatatgccgctcttataggctggaaatttcacttgaaacagcga
agctctgatgcgatccgacgaagacgctggagaagaaaaatggccccctccgagagtctc
ggagcatcggccattttcaaactggaaggagctcttggggcggatatgagttcagaggag
gaagacaagaaggataaggagcctgcagccaatatcttcggggcaaacacaccaattgtc
tcctgtatctttgaccgagccttcacatatcaccttcgctgctatctttatcaagctcgg
actctcattgccttggataaagacagtttttccgacccctatgcacatgtatcattcctt
caccgcagcaaaactacagagacaatccattgcactctgaaccccacatgggaccaaacc
ctgatcttcaacgaagttgaaatctatggagatccacaatcagtagcacagaatccaccc
aacgtagttattgaaatatttgacagcgatcaagtgggaaaagatgaatttcttggaaga
agtctgtgcccaccacttgtaaaactgacccctgttgacttaacgccaaaactgttgtgg
tatccggtcatgaatgctggcaaacactgcggagacgtcctggttgctgcagagctcatt
ctaagagacaaggatgggtccaaccttccattgctgccatcccagagagctccaaaactc
tacatggtacctcaaggcatccgtcctgtggttcaactcactgccattgagatacttgcc
tggggattacgcaatatgaagagttatcaaatggcgtccgtcacctctccgagcctcatt
gtggagtgcggtggagaaattatccagactgcaatgatcaaaaacctcaagaagacccct
aacttccccagctctgtcctcttcatgaaagtgctgctaccaaaagaagagatgtacgtt
cctcccgtaattattaaagtgattgatcacagaccctttggaaggaagccggtggtagga
caatgcacaatcgatttgctggagcagttccggtgcgatccatacattacgaaattcgat
gatgctgcaggattaaaagttgcactcttgtcttctgcccctcctcgtgatgtaattatt
gatgtggaggacactaaaccactgctggcaacacagttacaagagaaggaggaggaaatt
gtggactggtggagcaaatattactcctcaatcggagaacatgagaaatgtggccagtat
ttgcagaaaggttatgacaccttgaaggtgtataatacggagctggaggatgtcccagag
ttcagtggccttacagacttttgtgaaaccttcaagctgtatagagggaaggccgatgag
agtgatgatccttctgttgttggtgaatttaaggggtctttccgtatttatcctctctcg
gatgaccccggtgttcccagcccaccgcgacaattccgggagctgccagacagcggaccc
caggaatgcatcgtacgaatctacatcattaaaggaatagatctgcagccgaaggatagc
aatggcctgtgtgacccatacgtcaaaattactctgagtaagaaagtaattgaagaccgg
gataactatgttcccaacactctgaatcctgtattcggaagaatgtatgaactgagctgc
ttcttacctcaagagaaagatctgaagatttctgtgtatgattatgatactgtgacgcga
gatgagaaagtgggagaaactataatagacctggaaaaccgattcctctcacgctttgga
agccattgtggactgcagcaaacctactgtgtcacaggaataaatcactggagggaccaa
ctgaagccaacacagattttgcagaacttggccagattaaagggagtccctgcagcagag
ttctcagaaagtggaaacaaggtcagattttcaggacgtgaatacctgctggatacgttg
gaggcaaacaagataattcatcagcacctggggcctgccaaagagaggctcgctctgtat
gtactacgaagccaaggcctagttccagaacatgttgagaccaggacgttgtttagcact
ttccaaccaaacctcccacaaggcaaactggaaatgtgggttgatgtgttccctaaaagc
ttgggacctcctggccctcccttcaacatcacaccccgcaaagccaagagttatatcctg
cgggtgattgtatggaacactaaagacgtgctgctggatgagaagagtattactggggaa
gagatgagcgatatttatgtcaaaggctggattcctggcaatgaggagaacaagcagaaa
acagatgtgcactatcggtcattggatggtgaaggaaactttaactggcgattcgtgttc
ccctttgaatatcttccagcagaacaactctgtattatttctaagaaggagcatttctgg
agccttgataagacagagttcaagctgccaccaaagcttatactgcaaatctgggacaat
gacaaattttctctggatgactatttaggttttgttgaacttgatttacaccgcacaata
attccatcaaaatcctcagacaaatgcaatttagaaatgactgacctggccaaaccgtcc
aaagtggcctctttatttgaacagaagtccatgaagggctggtggccgtgttatgcagag
aaggatggaaagcggattttagcaggaaaactcgagctgactctggaagtgctgaatgag
aaagaggcagaagaaaggccagctggcaagggccgagatgaacccaacatgaacccgaag
ttagacccaccaaaccgaccagacacctccttcctttggttcacaaatccatgcaagaca
atgaaatttattgtgtggcgcagatttaaatggatcttcattggcatcatcgtgctgctg
ttcgttctgctcttccttggagtgttcttctattcattgccaggatacgttgctatgaag
attgtgaaaccaggttcataa
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